Ll_transcript_530397

• Id Trinity: TRINITY_DN51093_c0_g1_i5
• Name Transcript: Ll_transcript_530397
• Sequence: CAAAGAGCCAAAGAAACAAAAACAAAGGACAATACTTCAAAGAATATTCAAACCTTTTCTCATCTTATTTGCTCACCACTTCAAAAAGGTTGCAATCAAA ACATAGGAAAATCAAAACAAAAACAACAACTAGGATCTTCCTTTTGTTGTTTAATACAACGAAAAAAAATGATCAAATGAGAGAAAGATGAAAAAATGCT TTGTCTGCCATTAAAGCTTTAACTCCAAACAAAAGATCATTTCATTCTTTTCATTCATTCATCAATTCCCCTTTTTATCATTAACCACACAAACTTGCAC AGAAAACCAAACATATACAACAATGACTGTATATTTTCTCAACTTCTAAGGGTCCCTCTGAAATAAAGGAGTTTGGACTTTTCTGCTCAAAATGTTATCT TTTTCAGTTCCAGATCGAAGATCCCCACTTTTCATGCCAAAAAGTGAAGTGGGTATATTCTATTCCTGAAATAAGATGTTGAATATTATGATGTCTGAAT ATATCAAGAAGGTGAGAACTTTAGCAAAATGGTATCATGTTATTTTGCTGTTATTGCCTTCACTTCTTTATGGCACAAAAGGGTTGAACACTGAAGGGCA AATCCTACTAGAGCTTAAGAATGGTTTTCATGATAAATTCAATCTTTTGGGAGATTGGAAGTTTTCTGATGAAACACCATGTGGATGGATAGGTGTAAGT TGCATTCCTGACCATGATAATAATCATGTGGTCCAGTCTCTTAATTTGAGTTCGATGAGTCTTTCCGGAACTCTAAATGCTACTACTAGCATTGGCGGTC TGACCCATCTAACTTATCTCAATCTTGCTTACAATAAGTTGTCTGGAAATATACCCAAGGAGATTGGCGAGTGCTCGAGTTTGGAGTCACTTTATTTGAA CAACAATCAATTTGAAGGACCGATTCCTGCTGAGTTGGGTAAACTGTCTTTTTTGAAAAGTTTGAATATATGCAACAACAAACTATCTGGTGTTATTCCA GAGGAGTTTGGAAATTTGTCTTCATTGGTCGAGTTAGTTGCATATAGCAACTTTCTTGTTGGTCCCCTGCCGAAGTCCATTGGAAATCTTACAAATCTGG TAACTTTCAGAGCTGGTGCAAATAACATTTCGGATAGCCTGCCGAAGGAAATTAGTGGATGTAAGAGCTTGATGTATCTTGGTCTTGCTCAAAATCAGAT AGGAGGGGAGCTACCAAATGAGATTGGGATGCTTAACAACTTAACAGAACTGATTTTATGGGATAATCAGTTGTCAGGGTCTATTCCGAAAGAGCTTGGC AATTGCAGTAGTCTTGAGACCCTTGCTTTATATGGAAATGAGCTTATCGGAAATATTCCTCCAGAGATTGGGAACCTAAAATCATTGAAGAGGCTGTTTC TCTACAAGAATAATTTGAATGGAAGCATCCCAAGGGAAATTGGAAATCTTTCTTCTTGTTTAGAACTTGATTTCTCGGAGAACTCCTTAGTCGGTGATAT TCCTTCTGAATTCAGCAAAATAAGTGGTCTACGTTTGTTCTTTCTCTTTGAGAACCAGCTAACCGGTGTTATACCAAATGAGTTTAGCAGCTTGAAGAAC CTGACCAGGCTAGACCTGTCAATGAATCATCTTACAGGTCCAATTCCATTCGGATTCCAGTATTTGACTCGAATGTATCAGTTGCAACTTTTTGACAACA ACCTAACTGGTATAATTCCTCAGGGACTTGGACTTCGTAGTCCACTTTGGGTTGTTGATTTTTCCGCCAACAGCTTGACAGGAAGGATACCTCCTCATCT ATGTCGATATTCTCGCTTGATGTTGTTGAATCTGGCATCTAATAGGCTTTATGGAAATATACCAACAGGAATATTGAACTGTGAGTCATTGACACAATTG CTGTTGGTTGGAAACAGGTTTACCGGTAGCTTCCCTTCAGAGTTGTGTAAACTGGTGAACATAACTGCGATTGAGTTGAACGAGAACAGATTCACTGGTC CACTCCCTCATGAGATTGGGACATGCCAGAAATTGCAAAGGCTTCACATTGCAGATAATTACTTCACATTGGAGTTGCCAAAGGAAATCGGAAATATTTC TCAATTGGTAACCTTCAATGTTTCTTCAAACCTTTTCACTGGAGGAATCCCACCTGAAATTGTTAGGTGCATAAATCTCCAGCGGCTTGATCTCAGTCAG AACAGCTTTACTGGTTCCTTGCCAAATGAGCTTGGGACGCTTCAGCATTTGGAGATTCTCAAGCTCTCAAACAATAAACTCTCTGGAAATATTCCGGCAG AATTAGGTAATTTGTCTCATTTGAACTGGTTACAGATGAGTGGCAATCTGTTTTCTGGTGAAATACCTCCTCATTTGGGTTCCCTTTCAAGCTTACAGAT TGAAATGGATCTCAGTTACAATAATCTTTCCGGAAGCATACCATCCCAGCTTAGCAATCTCAATATGCTTGAATATCTTTTTCTCAATAATAACCATTTA GATGGTGAAATTCCGAGCACATTTGCCCTGCTTTCAAGCTTGCTGGGGTGTAATTTCTCATACAATAACCTATCTGGTTCTATACCTTCCACCAAAATTT TCGAAAGTATGGCTGTAAGCAGCTTTATTGGTGGTAACGAAGGCCTCTGCGGTCCACCTCTCGGCGACTGCAATGCCAACCCATCTTCTCGCGCAGCTCC TTCATCGAAGAGTGATGATTCTCGTCGTGGTAAAATTGTCATGATCGTTGCTGCTACTGTTGGTGGTGTTTCTCTCATCTTCATTTTCGTTATTCTTTAT ATTATGAGACGACCTTCAGAGTCTATTGCTTCCTTGAGACACATCGAGACTCCCTCCCCGGAATCAGATATGTATTTTCCTCCAAAGCAAGGATTCAACT TCCAAGATCTAGTTGAAGCTACAAAGAGATTTCATGAAAGTTATGTTATTGGTAAGGGTGCATGTGGAACAGTTTATAAGGCGGTGATGAAAACGGGCCA GACTATTGCTGTTAAGAAGTTATCATCTAACAGGGAAGGGAACAACATTGATAATAGTTTCAGGGCTGAGATATTGACTCTGGGAAACATAAGGCATCGA AATATAGTGAAGTTGTTTGGTTTTTGCTATCACCAAGGTTCCAATCTCCTACTTTATGAGTACATGGAAAGGGGTAGCTTAGGTGAACTCTTGCATGGTT CTGCAAATAATCTGGAATGGCCAACTCGGTTCATGATTGCTCTTGGAACTGCCGAGGGTCTTTCTTACTTGCATCATGACTGCAAACCAATGATTATTCA CCGTGATATAAAATCGAATAACATTCTGCTTGATGAAAACTATGAGGCTCATGTTGGTGATTTTGGTTTGGCAAAAGTGATTGACATGCCCCAATCAAAA TCAATGTCTGCAGTTGCCGGATCATATGGTTATATCGCCCCTGAATATGCTTATACTATGAAGGTCACAGAAAAATGTGACATCTATAGTTATGGTGTTG TTCTCTTGGAATTGATAACCGGAAGAACTCCGGTTCAGCCATTGGAGCAAGGAGGCGATCTTGTCACATGGGTGAGAAGCCATATACGGAATCATAAGAA TATATTGACAACAGATATACTCGACAATCGTCTCGATCTTCAAGAACAAACCACTGTGAATCACATGCTCACCGTTTTGAAACTTGCGATATTGTGCACA AGTATGTCTCCTTCCGAGAGACCATCGATGCGTGAAGTTGTGTCGATGCTTATTGAGTCGAATGAGCGAGAAGGGAATTTAACACTCACTCAAACTTACC ATGATCTTCCTTCCAAAAATGGCACATGAAAAGTATATTCAACTTCACTTGATATTAGTTAACAGAGATAATTTTTTATTTTTAAGCTAATTTTTCTTAG TATATGGTTTCCACAAGAGAAAATAGGTATAATTATCGTACATTCTTTCAGTCCATCATTTCTCTAGACTATACTATTCTACTTTGTATGAGTCTATGTT ATTATTAATTTCACTTTTCTGTATTCTCTTTTGGATTTCAGTATAGAAACTATTGTTGTACAGTTGAGGTTATTTTATGTTGTAGGGAAGAATAAGTGTA TTTTTTATGAATAAGTGTATTTTTTATGAACAAGTGTATAAGTTGTTCATATAACATGGTGTTATTTTCATTCAACTGATCTAAAAA
• Tissue: pods
• Gene name: LI_gene_182268;
• Additional information: details;

Expression of Ll_transcript_530397

FPKM

• PAB: 0.7
• PNAB: 0.7
• PS1: 0
• PS2: 0
• PS3: 0
• PW1: 0.5
• PW2: 1
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_530397

• Blastp: Probable leucine-rich repeat receptor-like protein kinase At2g33170 from Arabidopsis with 63.97% of identity
• Blastx: Probable leucine-rich repeat receptor-like protein kinase At2g33170 from Arabidopsis with 63.88% of identity
• Eggnog: leucine Rich Repeat(COG4886)
• Kegg: Link to kegg annotations (AT2G33170)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452464.1)
• Pfam: Leucine rich repeat N-terminal domain (PF08263.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;