Id Trinity | TRINITY_DN51093_c0_g1_i7 |
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Name Transcript | Ll_transcript_530399 |
Sequence | CAAAGAGCCAAAGAAACAAAAACAAAGGACAATACTTCAAAGAATATTCAAACCTTTTCTCATCTTATTTGCTCACCACTTCAAAAAGGTTGCAATCAAA ACATAGGAAAATCAAAACAAAAACAACAACTAGGATCTTCCTTTTGTTGTTTAATACAACGAAAAAAAATGATCAAATGAGAGAAAGATGAAAAAATGCT TTGTCTGCCATTAAAGCTTTAACTCCAAACAAAAGATCATTTCATTCTTTTCATTCATTCATCAATTCCCCTTTTTATCATTAACCACACAAACTTGCAC AGAAAACCAAACATATACAACAATGACTGTATATTTTCTCAACTTCTAAGGGTCCCTCTGAAATAAAGGAGTTTGGACTTTTCTGCTCAAAATGTTATCT TTTTCAGTTCCAGATCGAAGATCCCCACTTTTCATGCCAAAAAGTGAAGTGGGTATATTCTATTCCTGAAATAAGATGTTGAATATTATGATGTCTGAAT ATATCAAGAAGGTGAGAACTTTAGCAAAATGGTATCATGTTATTTTGCTGTTATTGCCTTCACTTCTTTATGGCACAAAAGGGTTGAACACTGAAGGGCA AATCCTACTAGAGCTTAAGAATGGTTTTCATGATAAATTCAATCTTTTGGGAGATTGGAAGTTTTCTGATGAAACACCATGTGGATGGATAGGTGTAAGT TGCATTCCTGACCATGATAATAATCATGTGGTCCAGTCTCTTAATTTGAGTTCGATGAGTCTTTCCGGAACTCTAAATGCTACTACTAGCATTGGCGGTC TGACCCATCTAACTTATCTCAATCTTGCTTACAATAAGTTGTCTGGAAATATACCCAAGGAGATTGGCGAGTGCTCGAGTTTGGAGTCACTTTATTTGAA CAACAATCAATTTGAAGGACCGATTCCTGCTGAGTTGGGTAAACTGTCTTTTTTGAAAAGTTTGAATATATGCAACAACAAACTATCTGGTGTTATTCCA GAGGAGTTTGGAAATTTGTCTTCATTGGTCGAGTTAGTTGCATATAGCAACTTTCTTGTTGGTCCCCTGCCGAAGTCCATTGGAAATCTTACAAATCTGG TAACTTTCAGAGCTGGTGCAAATAACATTTCGGATAGCCTGCCGAAGGAAATTAGTGGATGTAAGAGCTTGATGTATCTTGGTCTTGCTCAAAATCAGAT AGGAGGGGAGCTACCAAATGAGATTGGGATGCTTAACAACTTAACAGAACTGATTTTATGGGATAATCAGTTGTCAGGGTCTATTCCGAAAGAGCTTGGC AATTGCAGTAGTCTTGAGACCCTTGCTTTATATGGAAATGAGCTTATCGGAAATATTCCTCCAGAGATTGGGAACCTAAAATCATTGAAGAGGCTGTTTC TCTACAAGAATAATTTGAATGGAAGCATCCCAAGGGAAATTGGAAATCTTTCTTCTTGTTTAGAACTTGATTTCTCGGAGAACTCCTTAGTCGGTGATAT TCCTTCTGAATTCAGCAAAATAAGTGGTCTACGTTTGTTCTTTCTCTTTGAGAACCAGCTAACCGGTGTTATACCAAATGAGTTTAGCAATTTGAAGAAT CTGACATGGTTAGATCTGTCAATGAATAATCTTACAGGTCCAATTCCAGTTGGCTTCCAGTACTTCACTCGGATGTATCGGTTGCAACTTTTTGACAACA ACCTAACTGGAATTATTCCTCAGGAACTAGGACTCCATAGTCCGCTTTGGGTTGTTGATTTTTCCGACAACAGCTTGACAGGAAGTATACCTCCTCATCT ATGTCGAAATTCATGGTTGATGTTTTTGAATCTGGCATCTAATATGCTTTATGGAACTATACCAACAGGGATATTGAACTGTGAATCACTGGCACAACTG CTGTTGGTTGGTAACAGGCTTACTGGTAGCTTCCCTTTAGAGTTGTGTAAACTGGCGAACATAACCGCGATCGAGTTGAGCGAGAACAGATTCAATGGTC CACTCCCTCATGAGATTGGGACATGCCAGAAATTGCAAAGGCTTCACATTGCAGACAACTACTTCACAATGGGGTTGCCTAAGGAAATTGGAAATATTTC TCAATTGGTGACCTTCAATATTTCTTCAAATCTTTTCACCGGAGGAATCCCACCCGAAATTGTTAAGTGCAGAAATCTTCAGAGGCTTGATCTAAGTCAG AACAGCTTTACTGGTTCCTTGCCAAATGAACTTGGTTCACTTCAGCAGTTGGAGATTCTCAAGCTCTCAAACAACAAAATCTCTGGAAATATTCCTGCAA CATTAGGTAATTTGTCACATTTGAACTGGTTGCAGATGAGTGGCAATTTGTTTTCGGGTGAAATACCTCCTCAGTTGGGTTCTCTTTCAAGCTTACAGAT TGAAATGGATCTCAGTTACAATAATCTTTCCGGAAGCATACCATCCCAGCTTAGCAATCTCAATATGCTTGAATATCTCTATCTAAATAACAACCATTTA GATGGTGAAATTCCAAGCACATTTAACCTGCTTTCAAGCTTGATGGGGTGCAATTTCTCATACAATAACCTCTCTGGTCCTTTACCTTCCACCAAAATTT TCCAAAGCATGGATATAAGTAGCTTTATTGGCGGTAACATAGGCCTTTGTGGTCCACCTCTCAGTGACTGTAACACGAATCCATCTTCTCGAGCAGATCC TTCCATGAAGAGTGTTCATACTTCTCTTGGTAAAACTGTGATGATCATTGCAGCTGCAGTTGGTGGTGTTTCTCTCATTTTAATTGCGGTTATTCTCTAT AATATGAGATGGTCTGCAGAGTCTGTTGCTTCCTTGAGACACATGGAGACCAACTCTGTGGATTCGGATATCTATTTTCCTCCAAAAGAAGGTTTCACAT TCCAAGATCTAGTTGAAGCTACACAAAGATTTCATGAAAGGTATGTTATTGGTAAGGGAGCAAGTGGAACAGTTTATAAGGCGGTAATTAAATCGGGAAA GACCATTGCTGTTAAGAAGTTATCATCTAATAGGGAAGGGAACAACATTGATAAGAGTTTCAGGGCTGAGATATTGACTCTGGGAAACATAAGGCATAGA AATATAGTGAAGTTGTTTGGTTTTTGCTATCACCAAGATTCCAATCTACTACTTTACGAGTACATGGAAAAGGGTAGCTTAGGTGAACTATTGCATGGTT CTGCAAATAATCTTGAATGGCCAATTCGGTTTATGATTGCTCTTGGAGCTGCTGAGGGCCTTTCTTACTTGCATCATGACTGCAAACCGAAGATTATTCA CCGCGATATAAAATCGAATAACATTCTACTTGATGAAAACTATGAGGCCCATGTTGGTGATTTTGGTTTGGCAAAAGTGATTGACATGCCCCAATCAAAA TCAATGTCTGCAGTTGCTGGATCTTATGGTTATATTGCTCC BLAST |
Tissue | pods |
Gene name | LI_gene_182268; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_530399
Blastp | Probable leucine-rich repeat receptor-like protein kinase At2g33170 from Arabidopsis with 62.84% of identity |
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Blastx | Probable leucine-rich repeat receptor-like protein kinase At2g33170 from Arabidopsis with 62.84% of identity |
Eggnog | leucine Rich Repeat(COG4886) |
Kegg | Link to kegg annotations (AT2G33170) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019452464.1) |
Pfam | Leucine rich repeat N-terminal domain (PF08263.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |