Ll_transcript_528078

• Id Trinity: TRINITY_DN51095_c0_g1_i17
• Name Transcript: Ll_transcript_528078
• Sequence: TTCAAAACAATTCTCCTTTTTTTCTTCAACCCTTTCACCAAATCAACAACCTCATGCTTTTGTTTCCCCCTTTCTCTATATATCAATATAAATAATAAAT AAATCCCCCAATTTCTCTATTTTTCAATTTCCCTAACACAATTCAAATTCAATTTCAAGAATCCATTTCCGATTGATCTTCCACGATCTCATTCTTCTTC CCTCGATTGTGGTTTAGGGAAACACGATCAACATGTCTATTTCGGATTCCGATTCTTCTTCTTCTTCTTATGGTGCTGAATACAAAAATTTCAAACAAAT TAGCCGTGAGCGATTATTACATGAAATGCTCAGGTCAACGAAAACTGGGGATTCAAAATCTACATGGAAGGTACTGATAATGGATAAACTTACTGTAAAG ATAATGTCTCACTCTTGCAAGATGGCTGATATCACTGATGAAGGTGTTTCATTGGTTGAAGACATATTCAAGCGAAGGCAGCCATTGCCCACCATGGATG CGATATACTTCATCCAGCCAACTAGAGAGAATGTAATTGTGTTTCTGTCAGACATGTCTGGAAGGACTCCTTTATACAGGAAGGCATTTGTTTTCTTTAG CTCACCTATTCCCCGAGAATTGGTAATGGAAATTAAGAAAGACGCGAGGGTGTTGCCTCGCATAGGTGCTTTGAGAGAGATGAATTTGGAATATTTTGCC ATTGACAGTCAGGGCTTCATCACAAACAATGAGAGAGCTCTAGAGCAGCTATTTGGAGATGAGGAGGATAATCGTAAAGCTGTTGCTTGTTTAAATGTGA TGGCTACCCGGGTTGCTACAGTTTTTGCTTCATTAAGAGAATTTCCTTTTGTTCGCTTTCGTGCTGCCAAGTCCATTGATGCAACTACAATGACTACTTT CCGTGATCTTATTCCTACAAAGCTTGCTGCTGGTGTCTGGGACTGTCTCATGAAATATAAAAAAAGTATACCTAATTTTCCTCAGAGTGAGACCTGCGAG TTGCTCATCATTGATAGAACTGTTGATCAGATTGCTCCTGTGATACATGAATGGACCTATGATGCCATGTGCCATGATTTGCTGAACATGGAAGGAAATA AATATGTTCACGAGGTTCCTGGAAAGAATGGTGGTCCACCTGAGAGAAAAGATGTTTTGTTGGAGGATCATGATCCTTTATGGCTTGAACTTCGTCATGC ACATATTGCAGATGTATGTTCTGCCATAACTATTTACTATTTGGGCTTGGGCTTTTCTACTATTTAGGATCATCTCTACTATGTAACACTTAAGCAACAT GAATGAATAATACCTTTTGATAATTGATGGCCTTGCCAGGCCAGTGAACGGTTGCCTGATAAGATGACCAACTTCATTTCAAAGAACAAAGCTGCACAGA TCCAACATGGTTCAAGAGGTAATGGTGAAATGTCAACAAGAGACTTACAAAAGATGGTTCAAGCACTTCCACAATACAGTGAACAAATTGACAAGCTCTC CCTCCATGTAGAGATTGCAGGAAAAATTAACAGAATCATTAGGGAGTTAGATCTTCGGGAACTTGGTCAGCTGGAGCAAGATCTTGTTTTTGGAGATGCA GGAATGAAAGAGGTGATCAAATTCTTTACTACAAAAGAGGATACAACTCGTGAAAATAAGTTGCGCTTAATTATGATTCTTGCAGCCATTTATCCTGAGA AAATGGAGGGAGAAAAGGGTCTGAATTTGATGAAGGTAGCAAGGTTGACAAATGAGGATATGGTTGTTGTAAATAATCTGAGAATGCTTGGGGGAGCCAC AGATACCACCAAAAAATCTTCGACGGGTGCTTTCACTCTCAAGTTTGATATGCACAAGAAAAAGCATGCAGCAAGGAAAGATCGTTCTGGTGAACAGGAG ACGTGGCAGCTATCACGCTTTTATCCCATAATAGAGGAACTCATTGAAAAAGTCAGCAAAAATGAATTGTCAAATGAAGACTACCCATGTTTAAATGATC CAAGTCCAACCTTCCATGGTACACCTTATGCTGGATCAGTAATTCATAATCCACCTGCTCATTCAATGAGATCGAGGCGTACACCAACTTGGGCTCGACC TCGAGGGTCTGATGATGGATATTCAAGCGATTCGGTGCTTAAACATTCATCCAGTGATCTCAAGAAGATGGGGCAGCGAATATTTATATTCATTGTTGGT GGAGCAACCAGATCTGAGCTTAGGGCTTGCCACAAGCTTTCTGGCAAGCTGAAGAGGGAAGTTATTCTAGGCTCATCTAGTCTTGATGATCCTGCGTCAT TTATTACGAAATTGAAGATACTATCAGAAGCGGAACTATCATTGGATGATCTCCAAATATGATGATGCAGACCTTGAAACGGAAAGTCGAGCTTCGGCTT ACTTGTCAAATATGTGTTGTAATCATATAGTTTAATCATCTCAATGTAGTCTTAATATAGCAAATTCTTTGAACATTTGACTTGTGGTTCAGCCAAGCTG TACTGAATAACAGACTGTGCATATGCTAGAAATTTACCATTTGTTAGAGATGAAAGTTTTTCTTCTTTCAATTTCTGGTGAATGGGTCTCATTCAAATTC GAAAGTAATGCAGTCTGAAGAGCACTTATGGTTGTGTTTAAGAATGAGTTGGGTATGTATGAAATAATCCACTTTGATTTTTTTATTGAAACACGAAGCA TTCCCTCATCAGTTTAGTAAATGCATGTGGAGTAAACTACTCTATAG
• Tissue: pods
• Gene name: LI_gene_182282;
• Additional information: details;

Expression of Ll_transcript_528078

FPKM

• PAB: 4.3
• PNAB: 0
• PS1: 0.7
• PS2: 0.8
• PS3: 0
• PW1: 0
• PW2: 0.9
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_528078

• Blastp: SNARE-interacting protein KEULE from Arabidopsis with 81.65% of identity
• Blastx: SNARE-interacting protein KEULE from Arabidopsis with 72.33% of identity
• Eggnog: Vacuolar Protein(COG5158)
• Kegg: Link to kegg annotations (AT1G12360)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446659.1)
• Pfam: Sec1 family (PF00995.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;