Id Trinity | TRINITY_DN51099_c0_g2_i15 |
---|---|
Name Transcript | Ll_transcript_528473 |
Sequence | TAGACTCAACTCTTAAACTGTGAATCTTACAGTCATAAAAGAATCAGATAATTATTAAAGGAATTCAAATATTTATTTGTAAGTGAAAAATAACAAAAGC AATAGTTGCTGGAAGCGCGTGCATCGAGCTAAAAGGGTCGCCGGAGCCATGATTTCACAGTTCTTCATTCTCTCACAGCGTGGCGATAACATCGTTTTCC GAGACTACCGTGGTGAAGTGCAGAAAGGAAGTGCCGAGATATTCTTCCGTAAAGTTAAGTTTTGGGAAGATGGCGGGTTGGAGGAGGCACCACCTGTCTT TAATGTGGATGGTGTTAATTACTTTCATGTGAAAGTTGTTGGATTATTGTTCGTTGCAACTACAAGAGTGAATGTATCACCTTCGTTTGTCTTGGAGCTT TTACAAAGGATCGCTCGTGTGACTAAAGATTATCTTGGAGTTCTCAATGAAGACTCGTTGCGAAAGAACTTTGTGCTTGTCTATGAGTTACTCGATGAAG TTATTGATTTTGGTTATGTGCAAACAACATCTACTGAATTGTTGAAGTCCTATGTGTTCAATGAGCCGCTTGTTGTTGATGCTGCACGCTTGCCAGCGCT TGGACCTGCCTCAATTTTTGCACAAGGGACTAAAAGAATGCCAGGAATAGCTGTCACAAAATCTGTTGTTGCAACAGAGCTTGGGGGTAGAAAGAGGGAG GAAATCTTTGTAGATATAATTGAGAAAATCAGCATCACTTTTAGCTCTAGTGTGAGTACATACATCTTATTTGACTTTGAATATCACAATTTTGGTTGTA TATTGTTTGATCTGTCATGTTCACGAGTATAAAAGTTTTGCTTATGCTTTTCAGGATTAACTGAAAATAATGATTATAATATGTTGATGGTCTTGAATCA GAGACCAGATCCCACTCCTGAGAGTACTTGAAACTATTTTATTCTAAGTAAAGAACCATCAAGTTCAATTTCTATTTATGGATTCTTTGCTTCTTCAATG TAGGATGGAAAGGATTAACTTGTTTAAGGAAACATCATGAGTCATCTTGAACGATTTTTTTGTGATGCATTGTATCACTTATATTTTGAAATGCCACCTA CTGTGATAAGGCCTGGTTGTTGTTTGCTGTATTTTCAAGTTGTTCACTTTTCAATTGCCATATTTTCATCTATCATTCTTAGTTCTTTTATGTGATTTAA TCAGGGATATATACTGACTTCTGAGATTGATGGCACAATACAAATGAAGAGCTATCTTACTGGCAATCCTGAAATTCGTTTAGCTCTTAATGAAGACCTT GCCATTGGAAGTGGCCAAGGACCAGTTTACGGTATCTTCTTCCAGTTTTGGTGGTTTTTCATTTCCAGTTCCATGCTTGAAAATTTATACTTAGGAATTC TTTTTTTCCTTTTCATTTTTTTAAATGTGGACATTTATGAATGCTGTATCTACTATTTTTAGGTTTTTAGCATTTGAAACAATATGCTGATCATATGAGT TATGATCTTTGATTAACAAATAACAACTAATATTTCATCATATATGATGATCATCTGTTTTGATTCACTGAACTTTTCACATTATGTCTTTGACTGAACT TTGGGGGCACTATGCTAGCTTCTTCAGCTTTTCATTATTACTGCTTTTGCATATTTTCCATAGACTTTCTCATTGAATCAAGTAGAAACAGCTATATCCT GTGGTCTCCTCAAATTTGTAATTACCTGAATAACTTATTTTGGGTTGTTTCTAGAGCAGGTCATAGAAGTTCATCTGGCTTAGGACCAGTGATATTAGAT GATTGTAATTTCCATGAATCTGTTTGTCTTGATAGTTTCGAAATGGATAAAACTTTATCCCTGGTGAGTACAAAATGGTGTTGAAGATCATAAAAAATTC AGATATGGAAGTAATTTATTGCCTTCCTTCCTTTTGATTATTAAATTTAATAGTTGTTTCATGTTGCCAATTGTAGATACCACCGGATGGTGAGTTCCCA GTTATGAACTACCGCATGACCCAGGAATTTAGGCCCCCTTTTCGTGTTAATGCTTTGATTGAAGAAGCAGGGTCCCTTAAGGCAGAAGTGATTCTTAAAG TACGTGCTGAGTTTGCCTCAACTATAACAGCAAACACTATCAAAGTGCAGATGCCACTACCACAATTTACCACCAGGTTTGTACTATGCTTCTCTATATC ATTGAATAACTTCCATTGTGATTCCATTAACTGGAAAGTAGTTTTGACTGTGATTTCATTAAAATTACTAACTTTGACAGGACTTATTAATGTATTAAAA CTGAAGTCCTTAAATCTTCATGGCCATGGTTGTCTTACAAAGGTGCACCTAATAGGTTTGCACCAGGGTAGAGCTAGATTTAGAACTCTAGATGGACCAA ACTAAAATTCTTTACAGATTCTGAGATAAAATTTGGGGGTACTAATTATATTGTTTAATAATTGAAAGCAATTGATTAAAACCAATTGCATTTCAACCTT TGTTATGCTGAAAGAAATTTTAAACGTAAGCATTACCTGTTAATAAATATGCATGATTTGTGATATTATGGGATCATTTGTTGTATTGGTTATTTGTGAT CATTGTCATGCTCATTCAGCTCACAATATTTATTCATATTAATTGATATTTTTAGTTTGGAAAAAGAGTTCAAGGGGCCATTATATCAATATTGAAAGAA TTACAGACCTCGTTTCATTTATGTTACCAGCTCTCCTAAAATCTTAAGCTAGTGGATGAACTGTAAAGGCCTATGAATAGTTTTATATCTGACATGCTCC TTCAAGGTAGAGCCACTTGATCTTGAAATGTGGACTATGCGCAAACCCATCTTTCCTTTTGCTAAAGTTGAAATTTCTTTTTAAGATTTGGGTGGTAAGG GTCAAGGAGCGATTTCCTAAATGCTTAAACCTTTAGGTAAAGGTTCGTGAATGGTTTAGTATCTAACACTTCACGTTGTATATGGTAGAATCTGACAAAG CAAATAATAAATTTTGAAGGAATGCCATCAAGTAGTTTGAAAAACACTTCAAAAATGCACTGTAGATGTTGGAGCATATAATGCTTGTTACACATGTCAT ACGGATAAATTCAAATGCAGCATCCTGGGAAATCATAGTTATTTGTATGAAAATAGACATAGATGGTATTAATGACGAC BLAST |
Tissue | pods |
Gene name | LI_gene_182309; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_528473
Blastp | AP-4 complex subunit mu from Arabidopsis with 82.61% of identity |
---|---|
Blastx | AP-4 complex subunit mu from Arabidopsis with 82.61% of identity |
Eggnog | Adaptor-related protein complex(ENOG410XPFS) |
Kegg | Link to kegg annotations (AT4G24550) |
CantataDB | Link to cantataDB annotations (CNT0002502) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019431272.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |