Ll_transcript_461677

• Id Trinity: TRINITY_DN51109_c0_g1_i30
• Name Transcript: Ll_transcript_461677
• Sequence: AAAAAAACCACCTAGCTTAAAGATAACAGGATGCTCTAATGAGAATATCATTTTTTTATTTGGTTAACATTAATAGTTTATGAACAATTATTGTTCTTCC TCTCCTCCACTCTCTCCACTCCCAAAGCGATTTCCGGTAACTGAAACCAATTGATCCTCAACCAAACCCTAACCGCTTTTCTCTCTTCTCAGATTGAAGC CTCAACCAAACGAAACGATGTCGTCAGGACAAGTGATTAAGCGTGCTAAATACAAAACTACTGTCAAAGATCCTGGTACACCCGGTGTCATCAAATTGAC TGGGGAAAAATTTGTTTTCCGCCCTAATGATCCCACATCACACAACAAGCTCGAAGTGGATTTCAGACTTATAAAGAGTCATAAAAACACTAAAGAGGGA TCAAACAAACCACCATGGCTTAACCTTACCCATTCACAGGGAAGTTACATTTTTGAGTTGGAAAGCTTTTCCGATCTTCATGTTTGCCGGGATTTGGTGG GTGTTGCCCTTAGCAAGCATGGGGAAGCTGCAAAAGTTATTTCTGAGGAACAACTCAGCCCTGCTGAAATGGCACTCAGGATTAAGCTACTTCAAGAAGA TAGCAAATTGCAGAAGCTTCATAAGGAACTTGTGGCTAGTGGTAAGCTGACTGAATCAGAATTTTGGGCTACAAAGAAGAAATTGCTGGATCGAGATGAA AGCAGAAAGTTAAAACAACGGATTGGTTATAAAAATTCTTTGATCTTTGATACTAAGCCTACAAGTGATGGTCGGATAAACCAGGTTAAATTTCAGTTGA CACCAGAGATAAAATATCAGATTTTTGCCCTGAAACCAGCTGTTCACCAGGCATTCCTCAAATTTGTACCTAGTAAGATGAGCGAGGTAGATTTCTGGAA CAAATATTTTAAAGCTGAATATCTCCACAGTACCAAAAATGCTGTTGCAGCAGCTGCTGAGGCTGCTGAAGATGAAGATCTTGCTGTTTTTTTGAAAGAT GATGAGATATTGGAAGTTGAATCTCGAAAGAAGGTTCGACGGGTTGATCCAACTTTAGATATGGAAGCAGATGAAGGAGACGATTACACTCATCTTCCTG ATCATGGGCTCTTTCGTGACGGTAGCAAGGAAATATCTGGAGCTCAAAATACTCTGTATCAGAGAACATTGTTGCAAGATCTTAACAGACAAGGCGCAGT TGTTCTTGAAGGAAAAACTTTAGATATGGAGATGGAGCCGCCAAGAACAGTTGCAGAAGCCCTTGCTCGACGAAAACAAGGCGAATCTGACGGGGCTGTA GAGGAGGAGAGACGTATCAGAATTTCTAAAATGACCCAGATTGAGGATCTTCAGGCACAGAATGATCATCATTTTGCACCACTGTGTATCAAGGATCCCC GTGAGTATTTTGATTCCCAACAAGCTAATGCAGTAAAAACTTTGAATGATTCCCAAGGTGGATCCGTGAAAATAAGATGCAGTTTGAGTTCTGAGGAAGC CTATGGCTGTTTGAGGGCATCCATATCTAATATCAAAGCTATAGGATTAAGAGATCCTCTATTTAGTCATGAGGTTGCCGTTAAGGTCCTTAATGGGTTG ACTAAAAATATTTCAAGCACCAAATATCATCTTGGGAAAAATTCTCAGGACAGTGTACTTGATATATTGCCCAATGCAACTAAGGAGAAGCTACTAGATC ATTGGGTGAGCAGTCAGGAATTGCTGAGGCATTTTTGGTCTTCATATCCAATTACAACACAAAACCTTGCTAGTAAGGTAAAGTTAAGCTTTTATGACTT CAGTAAGATCTTTCGCTGAATTCTGTACATGGCTGTTAGAATAATTTATGAAGTCCCACATCGAATGAGTAATGAACCCTTTATAATGACTTGTGCAGCC CTTCCCCTATGAGCTAGCTATTGGGTGGAGATACGCCTAATTATTCTAATAATGACCTATCTAATACTGCACCAATAAAATTTCATAATTCTAGGATGAG TGTTTGCTTGTGATTATTTTTCCAGTTCATCTATATCATTAGCTTTTTTTCATGGGTGTTATCTTCATCGCTCATCCCCCGTACTCTCTCTTTACATCTC ATATAATGGCGGTGCATTGACATCATGAAATTATGGTTTCACAATAGGTTAACTCTCTTGCATCATGAGAATTGAGAAGTTCTTTGACATGTCAAAATCC TAATCTGGCTTGTAACTATTTGCTTGGGTGATCAGTCAATAGTAAACCAGTTTTGTCAAAATTTTGCTTGATCATATAAACTATTGCGCTGGCTTTAATC CAGATTGGTCAGTTTGATACATTGAATCACCTTTTTAAGCCAATTAATTGTTAGTTAACCATTTGTCCTTGTAGAGATAGCTTTTGAACCAAGCATTCAC TAATTCTTTTTACAACCCCCCTAACATGAAACCCCATTGGTTTTAATATGCTATATAGTAGCTACTTAGCTACAATCTAGATCTTGTAAACTTCTTGAGG ATCAAACCTTAAATTATTTATCAAGGGGACTTTGATATCATGTCATGGAACCGTTCAACTAAGAAATCAAGCAGGATCCTGAAATTGATGTTAAATAATC CAAACTGTCATATAGGTACTATGTAAAATGAGTGCATGATGTTCAATGAAGCTGAAGTGTGTGGGACTGATAATTATCTACATGGTCCGATATTTCCGAA CCTTGCTTCTTTTTCCCTTTATCCAGCTTACCAATTGTGCTGATATGATTAACCAGCTAGGCATTCGTAAATTGAGAGGGGTTTTCCTGCTGGATGACAT ACACTATATTGCAGATGTAAAATTATATAATGATCCATCAAGGAACCTCTATGAATTGCATTTTATTTTGTCTAATGTCTTGTTCATTTGGAAATTAAAT GCAGACCAAAAGACTTAAGGACGCCATGTCACAAGTATATTCTAAACTTGAGGAGATAAAAATATCTGCTCAATCAGACCTGCGGCACCAGGTTTCCCTT GTTGTCCATCCTATGCAACAGGCTCTGGATGCTGCTTTATTACACTATGAAGCTGACATTAAGAAAAGAAATGCTAAAGGGCCTAAGCCTAATGGTTATG TTTAGGACAATGTTTTGACCCTCTCTGTGCACTTTCAACATCATGCTTTAACAATTTAGGAATGTAGATTCCATCAATTTTGCCATGACCTCAAAGCCTA CGGCTATTTATCTCTATATATTGTGATGAAATATGATTTTTTTTATTAGAATTACTGAATTGGTTTGCAAGAGTCTTACTAAAAAATTAACTTGCAACAG AGAATTAATTTACTTGCAACATAAGTTATTGTTGCTTCTCTTCAGCAGTGATACAACAATTGAAAT
• Tissue: pods
• Gene name: LI_gene_182380;
• Additional information: details;

Expression of Ll_transcript_461677

FPKM

• PAB: 0.7
• PNAB: 0.7
• PS1: 0.4
• PS2: 0.6
• PS3: 1.3
• PW1: 0.8
• PW2: 0.8
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_461677

• Blastp: Probable RNA polymerase II transcription factor B subunit 1-1 from Arabidopsis with 55.18% of identity
• Blastx: Probable RNA polymerase II transcription factor B subunit 1-1 from Arabidopsis with 55.18% of identity
• Eggnog: Transcription factor(ENOG410XRI6)
• Kegg: Link to kegg annotations (AT1G55750)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441065.1)
• Pfam: Short C-terminal domain (PF09851.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;