Ll_transcript_461678

Id TrinityTRINITY_DN51109_c0_g1_i31
Name TranscriptLl_transcript_461678
SequenceTTCTGTAACATAACTTTATTCTCTACTCGATGGGAAGGATCATGGGCTCTTCCGTGATGGTATCAAAGAAGTATCTGAAGCTCAAAATACTCTGTACCGG AGAACATTGTGTCAAGATCTTAACAGACAAGGTGCTGTTGTTCTTGAAGGAAAAACGTTAGATATGGAGATGGAGCCACCAAGAACAGTAGCAGAAGTTC TCGCTCGGCGAAAACAAGGGGAATCTGACGGGGTTGTAGAGGAGGAGAGAAGTAACAGAATTTCTAAGATGGCCCAGATTGAGGATCTTCAGGCACAGAA TGATCATCATTTTGCACCACTGTGTATCAAGGATCCTCGTGAGTATTTTGATTCCCAACAAGTTAATGCAGTAAAAACTTTGTATGATTCCCAAGCTGGA ACAGAGAAAATAAGATGCAGTTTGACTTCTGAAGAAGCCTATGGCTCTTTGAGGGCGTCCATATCTAATATCAAAGCAAAAGGATTAAGAGATCCTCTAT TTAGTCATGAGGTTGCTCTTAAGGCCCTTGATGGGTTGACTAAAAATATTTCAAGCACCAAATATCATCTTGGGAAAAATTCTCAGGAGAGTGTACTTGA TATATTGCCCAAGGCAACTAAGGAGAAACTATTAGATGTGAGTTAACCCCAATTGTTTCTGCAGTCTTTGAGAAGAGGGAAAAAGGAAAACAAAAAATGA ATGGACGGAAAGAATGGAAGAAGAGAGCATTTGTTAATCTTATGGACTTGTACATTTAGGTTCAGAGTGTGGCATGTGTTTCTCTTATTTTCCAGCAGCA GTATAGCTTTCAATGATCTTTGAATTGTTGTTTTGGGTAGTTCTAATTGTTCTTAGTTATATTTTTGTAATACATGCTTCCTTCTTTACAGCATTGGGTG TGCAGCCAGGAATTGCTGAGGCATTTTTGGTCTTCATATCCAATTACAACACAAAACCTTGCTAGTAAGGTAAAGTTAAGCTTTTGTGATTTCAGTAACA TCTTTCAATGCTGTATTCTGTACATGACTGTTGGAATAATTGGGCCTAAGTAAGGGTGTGATAAAGTCCAATATTCAATGAATAAGAGTAATGAACCATT TATGATGACTTGGGCTGCCCCATACGTCTAGTTATTTTAATAATGATCTGTCTAATATTGCACAACTAAAATTTCATAATTCTAGGATCAGTATTTGTTT GTAATTATTTTTTCAGCTCATCTATAGCATTAGCTTTTTACATGGGTGTTATCTTCATTGCTCTTTTCCCCTACTCTCTGTATCTTTCATCCAAAAGATT GGTGCATAAGTGCATTCGCAGCATGATATTATGGTTCCATAGTAGATTTATCTCTTGCATCATGAATTAAAAAAAAAATCCCTTGCATTATACAGTCTGA TGTCTACATTGTGAGAAGTTCTTTGATATGTCAAACTCCTAGTCTGGTTTGTAACTATTTGCTTGCGTGATCGGTCAATAGTATATACTAGTTTTGTCAA AATTTTGCTTGACTATAGAAACTATTGCGCTGGCTCTAATCCAGATTAGTCAGTTTAATAATGACAGAGGGTGTGATATTATCTTATATACATTAGGTTA CCTCTTTTGAGCCAAGTAATTGTTAGTGACCCATTTCCCTTGAAGACGTAGCCTTTAAACCAAGCATTCACGTTCCCCTTCACATGATAGCCGCCCATTG GTTTTAATATGTTATATAGTAACTAGTAACTACTTAACTACAATCTAGGTCTTGTAAAGTTATTGAGAATCAAACCCTAAATTATTTGTCCAAGTGGCTT TGATATCATTTCGAGGAACCGTTCAACAGAGAAATAAAGCAGGATCCTGAAATTGGTGTTAAATAATCTAAACAGTAATATAAGTAGTATGGGTAAAATG AGTCCATGATGTTCATTGATGCCAAAGTGTGTTTAGAGGACTAGTAATTATCTACTTGTCCAATGTTTCCCTGAACCTTCCTTTCTTTTCGCCTTTATGG AACTGTACTAATTACACCAATGTTATTAACCAGCTAGGCATTCGATGAGTTGACGGGGTTTTCCTGCTAGATGTCATCCGTGGCAATGTCGATCTTACAT CCATTATATTGCAGATGTAATTATATAGTGATTCATCAAGGAATCTCTGCATTGCATTTTATTATGTCTAATTAATGTCTTGTTTACTTGGGAATTAAAC GCAGACCAAAAGACTTAGGGATGCCATGTCACAAGTATACTCCAAACTTGAGGAGATAAAAGTATCTGCTCAATCCGATCTGCGGCACCAGGTCTCTCTT GTTGTCCATCCTATGCAGCAGACTCTGGATGCTGCCTCATTACATTAGGAAAAGAAATGCAAAAGGACAGAAGCCTAATGGTTATGTTCAGGAGATGTTT TGCCCATTTATACTTTAAGCATTATGCTTTTAACAATTTAGGAATGTAGATTCCATCAATTTTGTCCTGACCTCAAAGCCTACAGCTATTTATCTCTATA TTGTGATGAAATGGTTTTATGTTAGAATCAGTAAGCAAGAGTCTTACTTAAAAGTTAACTTGCAAGTTGCAACATGGCATGAAAGAATACTATAGCCCAT GAAAGAAGATCTCCCTGTATTTCGACTCCTAAGTCAGAACAGATTTCGGCAAAAATAGAAAGTTTGGCTATCTTGGGCTGATGCATGTTTATTGTATGTT ACCCTCAATTGCAACGAATGGAAGTGCATCTGAAAGTGCAATAAGGCCTATAATGGCTGGTCAAACATTTCTGATGAGTTTTGTAAATGGGAACTTATTT TGAATTACATCTACGATTTTTCGATCTCGCTAAATGAGAGTATTGCATTCGACTATATTTTTTTCGGGGTCGAGTACCTCGTATATCTTTCGCGAAACAA GTTGTTCAGGTACATCCATTAACTAAAACAGATCTTGATTGACAAAAGACTAGTGTTTCTCATAACTATAATTTTGAAGGACTATTTGGTTAATTTAGTA TGTACTGATCAAATTTGGTGGCATGATTTTTCTATCTATTGTATTAGCTAAATTGTGG BLAST
Tissuepods
Gene nameLI_gene_182380; 
Additional informationdetails; 

Expression of Ll_transcript_461678

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_461678
BlastpProbable RNA polymerase II transcription factor B subunit 1-3 from Arabidopsis with 43.4% of identity
BlastxProbable RNA polymerase II transcription factor B subunit 1-1 from Arabidopsis with 46.08% of identity
EggnogTranscription factor(ENOG410XRI6)
KeggLink to kegg annotations (AT3G61420)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019462269.1)
Pfam-
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;