| Id Trinity | TRINITY_DN51109_c0_g1_i34 |
|---|---|
| Name Transcript | Ll_transcript_461681 |
| Sequence | CTGAATTGGAGCTTTTGTTTTCCCAGACCTCTCTTAGTCAACCATTTCCCCAGTCAGACCCCATGCAGCATCTGCTCAACCAGTTCATAGCTCCCTTGCT TCCAACTCTCCAAACCACATCGACCATGGCCATACCATTCTATCTCTACCAAATTCTGTCTGTAAATAATCACCTTTCTCAAGCCATGGTTTATAAAAGT ACAGCCGAAATACCAAACATGATATACAAATCAAACATGGTAATAAATTACAGGTCCTTTCAAACTTCCAAAGCCACAAGAACTAGTTTTTGCCTTTTTC CACTCAAAGAGACAACCACAGAACTAAACGAACATACTATGCAAACATGTTTTTTTTTTCAAATCATGAAAAACTGAAAATTGGAGTTGTTTTTGTTTAA ATGAAAAGAGGAGTCAGGAAAGTTTCCTGAAATCAAATAGATGGCATACTGTTTTTGGTTTCTGAACACATCGGAAGAGAGAGCGTGTGGAGCCTGTGGG CAAGTCATTTGTATTAATCCTTTGAAGTACCTCTATTCGAAGAAAAAATATGACCTCAGAAAATATTGTCACTTATATTTTGCATCCAAAGAAATGCCAA GTGACTCTTGATTTGATATGCATGGTTCTGCTTAATAATTTATAGAACATACGAATGTAGTTCATTTATTTTCTCCATTTGTTCACACTGTCTTTCGTAC ACTTTTTATGATATACTTCCTCTTTAACCCTTCTATGGCTGATATCTGAGAATGATCATTATGAAACATACCATTCCTCTAATTTCGGAAATGACCTCAA GCTAGAAGTGATTCTAAAACCTCTTCAACGAAGTGGAATATGTTTCTTAATTATCTTAATCTACATTGGGTTTCTTAATGAACTTTTGATATTGTGTTTT TTCAAAAACAACCAAGCCTTTTCTCAATGAGTAGGGTTGCCTACATGGATTAAATTATGCATGCCATATTTGGTCAAAGACCACAATTTCAGAGACCCTT TGGATTAAGGTTCTTTTGTAGTGTGTTTTTTACTTCAAATTTATCCATTTGAAATTGCTCTAGCTCAAAATGTCATGAAGTAGAGATAGGATCTCATTTT AGTCATATAAGAAGATTCTTAATATTATGTTTTATCCGCTATAATATTATCTTATCTATCTCATTTTGAATCTTAGCCACACTCAATGTTATTGATTTTG CTGAAGTTCAACTTTTGCAGCAAGTTGCAGAAGCTTCATAAGGAACTTGTGGCTAGTGGTAAACTGACAGAATCAGAATTTTGGTCGATAAAAAAGAAAT TGCTGGATCGACATGAAAGCAGAAAGTTAAAACAACGGATTGGTTATAAAAATTCTTTGATCTTTGATACGAAGCCTACGAGTGATGGTCGGATAAACCA GGTTAAATTTCAGTTGACACCAGAGATAAAATATCAGATTTTTGCCCTCAAACCAGCTGTTCACCAAGCATTCCTCAATTTTGTACCTAAGAAGATGAGC GAGGTAGATTTCTGGAACAAATATTTTAAAGCTGAATATCTCCACAGTACCAAAAATACTGTTGCAGCAGCTGCTGAGGCAGCTGAAGATGAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_182380; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_461681
| Blastp | Probable RNA polymerase II transcription factor B subunit 1-3 from Arabidopsis with 61.16% of identity |
|---|---|
| Blastx | Probable RNA polymerase II transcription factor B subunit 1-1 from Arabidopsis with 59.5% of identity |
| Eggnog | Transcription factor(ENOG410XRI6) |
| Kegg | Link to kegg annotations (AT3G61420) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462269.1) |
| Pfam | Short C-terminal domain (PF09851.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |