Id Trinity | TRINITY_DN51114_c3_g1_i1 |
---|---|
Name Transcript | Ll_transcript_460652 |
Sequence | TAGTGCAAAAACTAAAGTTTGTGCTGTAGTTGTTACATTATAAGGTGATTTAGGGTCTTTAGATGGATATGGAGTATCAAATTTATATATAAGTAATTTC ATGACAAATTCATTAGAGTTTGTAATTTGTCTTCTTCTTGTCATCCAGTGGTGCCCCTCACTTGAACATTAATCTTCAAATGAATTATTGGCCGTCTCTT ACTTGCAACCTGCATGAATGTCAAGAGCCATTGGTTGATTACATTTCTTCTTTGTCAGTCAATGGTGCTAAAACTGCGAAGGTTAACTATAAAGCAAATG GTTGGGTTGCACATCAAGTTTCTGACATATGGGCTAAAACAACCGCAGATCGAGGTGAAGCTGTTTGGGCTTTATGGCCAATGGGTGGAGCTTGGCTTTG CACCCATCTGTGGGAGCATTATACTTATACAATGGACAAAGATTTTCTTAAAAATAAAGCATATCCTTTGTTGGAAGGATGTACTTCATTTTTGTTAGAT TGGTTGATTGAAGGCCATGGTGGATTATTGGAAACCAACCCATCAACTTCACCAGAGCACATGTTCACTGCACCAGATCAAAAACCTGCTAGTGTGAGCT ACTCATCAACAATGGACATATCAATCATAAAAGAAGTTTTCTCTTCGATCCTTTCTGCTGCTGAGGTTTTGGGAAGACGCGGTGATGCTTTTATTAAAAG AGTCATCGAGTCTCAATCTAACCTACCGCCGACAAAAATTTCTAGGGATGGTTCCATTATGGAATGGGCAGAAGATTTCGTGGATCCAGATATACATCAT CGACATGTCTCACATCTGTTTGGCCTGTTTCCAGGACACACAATAAGTCTTGAGCAAACTCCAGACCTCTTTAAAGCTGTGAATTCTAGTCTAATAAAAC GAGGAGATGAAGGCCCAGGGTGGTCAACAACTTGGAAAGCTTCATTGTGGGCACGTCTTCACAACAGCGAGCACGCATATCACATGATAAAACATTTGAT TAACTTAGTAGATCCTGATCATGAAGGTAATTACGAAGGGGGAGTTTACAGCAACCTGTTCACAGCACATCCCCCTTTCCAGATTGATGCAAATTTTGGG TAAGTCTCATCTTTATGTCAGAACCGTAGCATTAGCTATCATGTAAATTTCACTTCCACCATGTAAAACCTTGCCTGAAGTATATTTCTCCTTTCTCATT TCTGGAAGGAAGAGGGAGGGACAAGGGTTTAGTTCTGTAGTTCTGTAGCAGTAACTGTTAGTTTAAGTTTCCCGATCACGAGATTAAAAAATTAGCCCAT TGTACGAGACTCTTACCAAGTGGGGTTTGGAGAAGGTGAACCACAGTGGTAAAGTTGCCTAACATGTGACCTGAAGGTCATGAGGTCAAATACTGGAAAC AATAATCTTCGTTTGCGAGAGTAAGGCAAGTGAGAGCCTTGTGCATTGGGCTGTCATTCATGTCATCATGATTATAACTATGCGTCTTTAATTTCTTCAA TCATATCTCGAACACAGAATCCATCTCATTGAAAAGCAATTCGAAGGTGAAAAAATCACATTTTATTCTAAACTCTTAATGGAACCTAGACATAATAGTT GCTGTTCTATATAATTTTATTCAGAAGATATGTTCAAATCATGCCTGTGATGAAACTGTTGCTCTAGATTCTAGTATTAACAACTTTGTGACTACTTATT CTGAATTAGAGGAAACATTGTTTGGTATCAGTTTTTCAGCAGCTATTGCGGAAATGCTTGTTCAGAGCACAATGGAAGATCTCGACTTGCTTCCTGCGCT GCCGGAAGATAAATGGCCATATGGTTGTGTTAAAGGATTAAAAGCACGTGGCGGGGTTACAGTCAACATGTGCTGGAAAGAAGGAAAGCTAATTGAAGCT GGCCTTTGGTCAGAAAACCAGAATATTCAACTAAGACTACATTATAGAGGAATAATGGTCTTAGCAGATTTATTACCTGGAAGAGTTTACTCATATGATA ACATGCTCAAGTGTGTCAATACATACAACCTTACTGATGTGAATCCTTGAAAATTTTCTCCAACCCATCTAATAAATCTGTTAAGAGATATTCATTACTT CTAGTCTCCAATATATTATTCTTCAAGGGCCATTCAACCAAGGAAGATCAAATTTATAGAGAAGTCTTTCATTCATTTGCACTACTGTTTAAGGTTTAAA ACCTACAAATATTTATATTGATAACATTTTGTTATTAACTTCATACAAATGAATGTTTCGATCTTAATATCTGGATATGTGATTTATACCAGTAAAAAGG AAATGCAC BLAST |
Tissue | pods |
Gene name | LI_gene_182429; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_460652
Blastp | Alpha-L-fucosidase 2 from Arabidopsis with 76.22% of identity |
---|---|
Blastx | Alpha-L-fucosidase 2 from Arabidopsis with 75.31% of identity |
Eggnog | alpha-l-fucosidase(ENOG410XPGV) |
Kegg | Link to kegg annotations (AT4G34260) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019439048.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |