Id Trinity | TRINITY_DN51114_c3_g1_i5 |
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Name Transcript | Ll_transcript_460656 |
Sequence | TAGTGCAAAAACTAAAGTTTGTGCTGTAGTTGTTACATTATAAGGTGATTTAGGGTCTTTAGATGGATATGGAGTATCAAATTTATATATAAGTAATTTC ATGACAAATTCATTAGAGTTTGTAATTTGTCTTCTTCTTGTCATCCAGTGGTGCCCCTCACTTGAACATTAATCTTCAAATGAATTATTGGCCGTCTCTT ACTTGCAACCTGCATGAATGTCAAGAGCCATTGGTTGATTACATTTCTTCTTTGTCAGTCAATGGTGCTAAAACTGCGAAGGTTAACTATAAAGCAAATG GTTGGGTTGCACATCAAGTTTCTGACATATGGGCTAAAACAACCGCAGATCGAGGTGAAGCTGTTTGGGCTTTATGGCCAATGGGTGGAGCTTGGCTTTG CACCCATCTGTGGGAGCATTATACTTATACAATGGACAAAGTAAGTTCTCCCTTTTCAGTAAATTGTCTAAGCCATGGTTTAAAGTATTGACTCAAAGTT TGGTAGTTATAGACTAGTTACAAAATATGGAATACTGAAGGATGGAGAACCTAATAAGTTATGATGCCACATGTTGTGTTTATTTATTTGTAAATACTGT ATTTCTAACTAGATTTGCTTGGTTGCTAATTGCTATCAAGTATATCAGTAATTAGGTAAGTGATGATTGATTTTTCTTATATATTAGGATTTTCTTAAAA ATAAAGCATATCCTTTGTTGGAAGGATGTACTTCATTTTTGTTAGATTGGTTGATTGAAGGCCATGGTGGATTATTGGAAACCAACCCATCAACTTCACC AGAGCACATGTTCACTGCACCAGATCAAAAACCTGCTAGTGTGAGCTACTCATCAACAATGGACATATCAATCATAAAAGAAGTTTTCTCTTCGATCCTT TCTGCTGCTGAGGTTTTGGGAAGACGCGGTGATGCTTTTATTAAAAGAGTCATCGAGTCTCAATCTAACCTACCGCCGACAAAAATTTCTAGGGATGGTT CCATTATGGAATGGGTATGCAGTATGCAATCATATTTAAATTTGTGCATTCCTTAACTCCATCTCTCTAGTTTATAATTGCCATGTTTTGTGCTTTGGTA TTTTGTTTTGAATTATAGCGACCAAGTGATATGATTTTATTCTGTAATTAGCTAGATTAGAGTCATCCGGTTAGTGACTCTAGTTAGCTAGCTTGATCAA GTAGCTACCGCTTAATTAGCCGCTGTAGTTAGTAAATAGTTAGGCATAACAACTTTTCCCGCCAAACTGACAGCTATAAATAGCCGTAGTTGCTTAGAGG AGAGGCTTGCTTGATTTATTTGTAAACTTCCCCTGTAACTCACTCTTATCCGTAATACTATATTCTTGGGGTTCTTTCACTTCCAGAACTCCTTGTCTCT CTCAGATTCTTCAAATTCCTTGTAATTCATAGAGTTACCTCTTACTTTCTATTAGTTTCATAACACCAAGATCTACTGTAGGCTAGTAGCAACTCTGTGT TTAACTTCAATTTATTGGCAGGCAGAAGATTTCGTGGATCCAGATATACATCATCGACATGTCTCACATCTGTTTGGCCTGTTTCCAGGACACACAATAA GTCTTGAGCAAACTCCAGACCTCTTTAAAGCTGTGAATTCTAGTCTAATAAAACGAGGAGATGAAGGCCCAGGGTGGTCAACAACTTGGAAAGCTTCATT GTGGGCACGTCTTCACAACAGCGAGCACGCATATCACATGATAAAACATTTGATTAACTTAGTAGATCCTGATCATGAAGGTAATTACGAAGGGGGAGTT TACAGCAACCTGTTCACAGCACATCCCCCTTTCCAGATTGATGCAAATTTTGGGTAAGTCTCATCTTTATGTCAGAACCGTAGCATTAGCTATCATGTAA ATTTCACTTCCACCATGTAAAACCTTGCCTGAAGTATATTTCTCCTTTCTCATTTCTGGAAGGAAGAGGGAGGGACAAGGGTTTAGTTCTGTAGTTCTGT AGCAGTAACTGTTAGTTTAAGTTTCCCGATCACGAGATTAAAAAATTAGCCCATTGTACGAGACTCTTACCAAGTGGGGTTTGGAGAAGGTGAACCACAG TGGTAAAGTTGCCTAACATGTGACCTGAAGGTCATGAGGTCAAATACTGGAAACAATAATCTTCGTTTGCGAGAGTAAGGCAAGTGAGAGCCTTGTGCAT TGGGCTGTCATTCATGTCATCATGATTATAACTATGCGTCTTTAATTTCTTCAATCATATCTCGAACACAGAATCCATCTCATTGAAAAGCAATTCGAAG GTGAAAAAATCACATTTTATTCTAAACTCTTAATGGAACCTAGACATAATAGTTGCTGTTCTATATAATTTTATTCAGAAGATATGTTCAAATCATGCCT GTGATGAAACTGTTGCTCTAGATTCTAGTATTAACAACTTTGTGACTACTTATTCTGAATTAGAGGAAACATTGTTTGGTATCAGTTTTTCAGCAGCTAT TGCGGAA BLAST |
Tissue | pods |
Gene name | LI_gene_182429; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_460656
Blastp | Alpha-L-fucosidase 2 from Arabidopsis with 80.46% of identity |
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Blastx | Alpha-L-fucosidase 2 from Arabidopsis with 70.73% of identity |
Eggnog | alpha-l-fucosidase(ENOG410XPGV) |
Kegg | Link to kegg annotations (AT4G34260) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019439048.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |