Ll_transcript_460398

• Id Trinity: TRINITY_DN51132_c0_g1_i6
• Name Transcript: Ll_transcript_460398
• Sequence: TATAATTTCAACATCATATTTGAACTATGGTAGACACAAATGATTCTTCTGGTATCATTTCTGTATAACTTAGAATATTACTTCATATTATAGGAATTAA TCCTTTTGAAAATTCATGACTTTATCACCCCTATCAGGTATTTCGAAGAATCGATTTTTTTTACTATAAGCCGACCTCGCCCGTGGTTCCGAAATACAAT ATGGGCTTGCCCGAACCGGTTCGTTGCTGCTTGTTTCGTTGATCCGTTATGCAGTAGCTCCTCTTTTGTGAAAGTGGCACCCGTCACGTGACTGAGTGAG CGTGCAAAAACGCGCCACCTCACTAACTCACACCCCTTCGTTTCTCCTTTCCCTACAACAATGAGACGCACTCCTCCGCCGCCAATCCACTTCCTCACCA CCGCCGTCACCGACAACTCCGCCGCTACTGCCACCTCCTCCATCATGTCTTCTTATCCACGTCAACGAGGACGCGGTGGAAGATTCTCCGGCCGTTCATT TTCCAGCGGCAGAGGCCAATTCGTCACCGGAGATTCTCACTTCCGCTCGGTCCGCGACGATAATTTAGGTCACCGGCGAGGCGAGAGAGGAAACTTCGTC AATCAAACGCAACCTTATCAACAAAACTCTCAGACTTTTTATCCGAGGCCTCAACCACCACTGCCGCCGCCGCCGCCTTATCAACAAAACTCTCAGTTCC GTCATCCTTATCCACCGCATCGTCCGCCTCCGGCGATTGGTCAGCAATTCCGTCCTCGACAAAAGGCGCCGGATCATAGAGAGTGGGAGGCTGCAAAGAC GCCACCACCTCCTCCTCATTGTGAACGATTTAAAGTTCTTTCCTATAATATATTGGCTGATTACCTTGCTTGGGACCACCGGAGAGCACTTTACTTTCAC ATACCCCAACACATGTTGGACTGGCAATGGAGAAAGAGAAGTATACTTTTTGAGCTTGGATGGTGGTCTGCTGATATCATGTGTTTTCAGGAGGTTGATA GATTTCATGACTTGGCAGAGGAGTTGAAGCTAAAGGGATACACTGGCATCTGGAAGATGCGTACGGGCAATCCAGTTGATGGCTGTGCAATCTTTTGGCA GATATCGAGGTTCTGTACAGCTCTACTTTGTTCTAGATGCTACTTGCTATTTATCAAAATTGGGTTTATTTTCTTCACCAGTGATTAAACATTGACTGCA TTCATGCACATCAAATGGCTTGTGGAAATTTCTATAACCTACACCTTTTTCATTAGGAGTGTGAATGACTTGACTCAAGTCAAGCACACTTGAAGCTCAG ACTTGGCTTGTGAGTAAAAAGGGGAGTTTAAAGCTTGAGCTTGACTTGATTAAAAATATGATGTTTTTAGCTTGGCTCATTTAAAGCTTCGTTGTTTTTT CCTTTATCAAATTTCTCACTGAATTATTTTTAAGTCTTTAAATTTAACATTTAACTAATATCTTTATACTAATATATGAATAAAATAGAAAAATAGAATT TTATATTCATAGATTATAATACATTATGACTCTGGTAATACACATGAGCTATCCGTGAGCTCTTTTTTGTTATACTTCCTTTCCTGTTTAGCCTTGTTTT TTTATGCTTATTTGGCATTATATATATAAGCTGCATATAGGTCTCTGAAGTCGACATACACTCATACTTGTCTGTGGGTGAATTCCAATTCAATTTGCAT CTCGAATTCAATGTCTTTCAGTCAGCTATATTTGTGAGCAGAAAGAGTAAGAGAGGGGACCACGTGTCCTGTCCTAATGCTAAAACCAGGATAGATTTTA TTTTAATTTTATTCGTTTAATAATCTCATTTATCTGACTTATCATAGGTTCAAGTTGTTATATGAAGAATCCATTGAGTTTAATAAGCTGGGACTTAGGG ATAATGTTGCTCAAATATGCGTACTAGAGTTCATTAATCAAAATGGATCGGTTCCATCCAGCGTGACAGGTTACAGTAAAATTGTGGTTTGTAACATTCA TGTGCTTTACAATCCAAAAAGAGGAGAAATTAAACTTGGCCAGGTCAGAGTGCTACTCGAGAGGGCTAACGCTGTTTCTAAACTCTGGAATAATGCCCCT GTTGTTATCTGTGGGGACTTTAACTGTACCCCTAAGAGTCCACTGTACAACTTTATCTCTGAACAGGAGTTAGATTTGTCTGGAATAGAAAGGGATAAGT TATCAGGACAGGCTTCTGCTAAAATTCGTTCACCACCAAGGCTTGAAAGATTTTCTGGTGGTTCAGCTCAGAACGTATCTATTGAAGGTGACAAGGAAGT TAATGCAGAACAAAATAATTCTTACATGCAGAATCCTGGCACTAAGTGTAATAGTTCAGAGAATCAATATGCTCGCACTGTTCTGGATATGTCTAAATTG TCTGTGACAAATGTGCAGCATGGAAAGGAGAATGTCGCATATGCAGGAACGGATACTCAGGAGCCTGCTATTGAACATTCTAAGAGTTTTGGTGAAGTTG GTAGCATAAAAGAAGAGCAAAATTCTTCTTATGGTGAAGTTAGGCTCCCTGTTGATAGTATAAATGCTGAGATTCATGATGTCACAGTTAGTACCTCTTC AGATACTGTCGCAGCTTTAAATCAAGAATCATTAAGCAAAGAATCCAACCTACATGTCCCTGAAGGAAATAAACATATGGAGATTAATTTCCCCCCAACC TCTCTCCAAGAAGACAACCAATCTTCCAAGGTCAAGATAGGTCTTGAGTCAACAGATCTTCTCAATTTAGAAATCTCTATAGCTAAACCATCCAGCGAGA CTTCAGTTTCCGATGCTTCTGAAGTCCTCCATCAAGGGTATAGAGAAAGCCAATCTCATGAACTCGATGTTAATGACCAAAGGAACAGCCCATCAGCCTT AGATCTTGTTGGCAAATCACATCAATCCACCAACATTGACTTTCCACTAGATGAAAAGCTAGATAAAGCCATAATAGGCAGCGAAAATACTGGCAAAGAT GACAACGCTTTCATATCTTCCTTACATAATGCCAAAGAAGGCGTAACTCTTGATCTTGGTCCATCAATTAAATCAGATTCTGCCTCCAACAATTTGTTGC TGGCTGAAGAAATCAATGAAGTGGAGGATGACTTATCTCCTAGTCCCAGTTCCAAATCAATTGATGCAGAGTACACTCCTTATAATCCATCATTGTGGAC CCCTATGGAGATAGAAACTGCAACAGGAAATGTAGACTGTACCTTCTTGGAGCACCAGTTATCGCTTAGGAGCACATATACTGAAGCCATGGATTGTTCA GGGACTAGAGACCCCCATGGGGAGCCCCTAGTGACCAGTTATAATAGGAGCTTCTTTGGAACTGTTGACTACATTTGGCGATCTGAAGGTTTGCAAACAA CTCGAGTTCTCGCTCCGATACCTAAACATGCCATGGATTGGACTCCAGGATTCCCAACAAAGAAATGGGGCAGTGATCATATTGCTCTTGTTTCTGAGTT GGCAATATTGAAAGATGGCATATAGACATGAAGAAGGAGGATGTTAAATAGCAGCACTGTATTTGACATCTTAAAATCATAACATGTGGTGCCAAGCAAT GAAAGAGGGAGACACTTCAAAATGGTTAGTGTTTCTGCATCCAAATATTGCAATAATTAGAATAATAGGATTTGGATTTGTATTTTGTTCACAATGGTTT GTGCCAACTTTTAAAACATATATCTATTTAAATTTAAGATTTATGATTTATAATAAATTTATATATGCTGTATCTGGTTTCTTAGATGGGTGAGGGTAGA GTATTTGGTAGACTTCAGAAACTGGATGGAACAATTGTTTAGTCTATTTTATCTACAATTGAACATGACAATGTGAACATCTTACATTCATTAATCTCTA TCCAATGTTTTTTTGAC
• Tissue: pods
• Gene name: LI_gene_182568;
• Additional information: details;

Expression of Ll_transcript_460398

FPKM

• PAB: 0.1
• PNAB: 0.3
• PS1: 0.3
• PS2: 1.2
• PS3: 0.7
• PW1: 0.1
• PW2: 0.9
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_460398

• Blastp: Carbon catabolite repressor protein 4 homolog 6 from Arabidopsis with 50% of identity
• Blastx: Carbon catabolite repressor protein 4 homolog 6 from Arabidopsis with 56.25% of identity
• Eggnog: Ccr4-NOT transcription complex, subunit(COG5239)
• Kegg: Link to kegg annotations (AT5G11350)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019457883.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;