Id Trinity | TRINITY_DN51132_c1_g1_i12 |
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Name Transcript | Ll_transcript_460416 |
Sequence | CAAAAAAGAAAAAGAAAAAGAAATTGAAAGTAATGATAATGCTGTTTGTTGCTGTGACTAATTAGCTACGATTCCTTGTTCGCTTTACTTTTTTATTCGA TTTATTTTTTCTGGCGAAACTTTTAAAGACGAAACCATAAGCCCACACCACAATTCTTACGGTTTTCATTTTTTTTCTTGTTTCACATACCAATCTTTCT TTAGCGTAAACGTTTCTGTAAAGTTCAATTGAAGCATTTCAACCATTCTTCAAGTTTTTCACCGTTTTATATAATCCTACATTTTTCGTTTGTTTTTTCA TCCAAGCTATTTTTTTAATATTTTCTAGATTCTTCTATCACTGTTTTGCTGATAATTGATCCGTGTCGACGAATTGTTCATCATCCTTATGCTGGTACAT TTCGCTTTTGTTTTTCTATTTTCCAATTTATTTAGGTTCGGGTTATATATGGAGATAGAAAGCCTGCAATTTACTCAATTGATTCTGATCATTTTTTCTT TCTTTTCTACTGGAACTTTGATGTTCCTACCCTCTTAGTTCGGAGGAGTTGTTTTGTTGTTCTGCGTTTCGTGTAATTGGCGATACAGAAAGAAATTACT GGCTTTACTAATTCTACTAACCTCTAAAAGCTGTGTTAGTTCGATTCCGTTTCGGTTATTTGTGTAAAACTATTCCTGGCTCCCTAGTTTGTTCAGTTTA GTTTTACTAGTCAGTTATAGTGATTTACTAGTTAATTTTACATTGATTGGGCTATATATGCTCTTTCAGGTGATGCATGGGTGATGAGTTGTGCCAAACT TGCTAATACGGTGGGAAGGGATGAACATTGCTGCTCTTTTAACTTCTGCTGGAATTAATATCGCCATATGCGTGGTGCTCTTTTCATTATATTCGGTATT AAGGAAACAGCCGGGTAATGTGAGTGTGTACTTTGGACAGAGGCTATCCTCTCAACGTTCAAGACGCCTTGATCAATGTTTAGAAAGATTTGTTCCTTCC CCTAGCTGGATATTGAAAGCATGGGAAACATCTGAGGATGAGATACTGGCCACTGGTGGCCTAGATGCTGTGGTTTTTGTCCGGATACTTGTGTTCAGTA TCCGAATATTTTCCATTGCTGCTGTCATCTGCACTCTTCTAGTGCTTCCAGTGAATTATCATGGCGGCGAAAGAATGCATACACATATACCTTTTGAGTC ACTGGATGTATTTACCATTGGGAATGTCAAAGAAGGTTCAAAGTGGCTTTGGGCTCATTGTCTTGCATTATACATCATAACATTAGCGGCTTGTACTCTT CTTTACTTTGAATATAAAAGCATTACTAATTTGAAGCTGGTACATATCATTGGATCCCCTCCAAATCCAAGTCATTTTGCAATTCTTGTCCGATCAATTC CCTGGTCTTCAGAAGAATCATATTGTGACACGGTGAAAAAATTCTTCTCATATTACCATCCATCGACATATTTGTCACACCAAATGGTTTATAAGTCTGG TACAGTTCAGAAATTGAAGGATGATGCAGAACATGTGTGTAAGGTAATTAGAGATACTTCATTGGAAAATACTTGTAAGCCAAGTTTTACGCAATGTTGG TGTTCTGGAGGAACAACAAATTCTTTTAAGATGATTTCTAATGAGATAGATATAGAGAGCGTACATGGGAGAACAGGATACACCGACAAACATTTAGATG AAAGTAAAAAGGAATGCCCAGCTGCTTTTGTGTTTTTTAAAAATAGGTATGCTGCTCTTATGGCTGCACAGACTCTTCAATCATCAAATCCTATGTTATG GGTGACAGACCTAGCTCCTGAACCACATGATGTTTACTGGTCCAATATTTGCATACCTTATAGACAGCTTTGGATCCGTAAGATAGCTACACTTGTGGCT TCTATAGTCTTCATGATTGTATTCCTTATCCCTGTTACATTTGTGCAAAGCTTGACTCAACTAGACAATCTTCAGAAATTGCTACCTTTTATGACAGGGA TGCTTAAAAAGTAAGTTGTTGTTGAGCAACAAATGACCTGGGCTTCTATACTCTTGGCATGACTTGTTTTTTTAGCAATACACATGGATTAGGATTTTGA AAGAAAGAATTATGCATGACATTCGTAAGTGGAACTTCACATTAATGGGAAAAATAATGAATATGAAATTCATTTTAATAAGAAATGAAGGTTTTAGGGA AAATTAATAAAAAAATGTTGATACAAATATTTAAAAGTTTAGGAAAAGAAGTCAACTAGTTAACTATGTTAAAAGAGTTGTTGTGATTAACCACTTGAGT TGTTAATTACTCCTAAACTTGAAATTTAAAGAATTCCTTATTCGGAAGTCTCCTAAGCTTATCTCTGACATCCTGTTAACCTTTGAGTTATTGCCAAGTG TGCTGCTTGTTATCAGTGACGGTGTTGGTATTCTGGTACAAGTTGAGGATGATCATTTTTTGTCCTTCTACTGTGCCAATCATTACTTATTACTTTATAA TTTATGACATAAGCAACACAAAAATTAGGCATTATTAGATGCTACACTGTCTAGTGAAAATTTAGATTAACAGAAACTGATATAATGAAACTACGACAGG GAACATTGAATGTAAGTTGGGTATTTTTAAATATAAGAATGATTTTCAGTTCACTGTAAACTGACCTTTTTTGTTTTTTGCAGTAAATTTGTGATTCAGG TGGTGTCTGGTTATCTACCAAGTGTGATATTGGTTTTATTTTTGTGTGCTGTTCCACCAGTTATGATGCTATTTTCTGCAGTGGAGGGATCTATTTCTCG TAGTGGAAGGAAGAAGAGTGCATGCTGCAAAGTCTTGTACTTCACAATCTGGAATGTGTTTTTTGTTAATGTTTTTGCCGGTTCCATTATCAGTCAACTC TCAGTCTTCTCTAGTGTAAGAGATCTGCCTGCTCAGCTTGCGAAGGCAGTGCCATCACAGGCTACCTTCTTCACAACTTATGTTTTATCATCTGGTTGGG CAAGTTTGGCAATTGAAGTTATGCAAATTTGTCCTCTTTTATACAATCTGTTCCAAAGAGTCATACTCAGGGTTAAGGATGATTCAGAGGGTGGCAGCCT ATCTTTTCCATACCATACAGAGATTCCAAGGATCTTACTATTTGGATTCCTTGGCTTCACCTGTTCTATTCTTGCACCCCTAATGTTGCCCTTCTTACTG TTCTACTTTTTCCTTGCTTACCTTGTTTACCGAAACCAGATTATCAATGTGTACATTACGAAATATGATAGTGGGGGACAGTACTGGCCCATCGCTCACA ACACAACGGTCTTTTCATTAATCGTTGCTCAAGTTATCGCACTTGGGGTGTTTGGACTAAAACACTCATCAGTTGCATCTGGGTTCACCATTCCTCTGCT GATTTGCACTCTTCTATTTCACCAGTATTGTAGGCAACGATTTCTCCCAATATTTAAGAGCAATTCAGCACAGATTCTTATTGACATGGATCTGAGAGAT GAGCATAGTGGAAGCATGGGAGAAATATATGAACATTTGAGTTCAGCCTACAGCCAGTCCAGTTTAGTGCCGGATGCCTCAAACCATACTAAATGCTTCA GTAATCGTGAGGACAAGAGGAGTGATCAGTCTTCAGAAGATATAGAGAAGGGCAAGGAAGTTATTCAAAAAGAATGATAGGCCATGGGATGTTAACTGCA CTTTGAGTTCGAAAGAGGTACCTAGTGAGGAGTAAATTAGTTCTTCAGTTTGTACATTATGTATTAAATCATGTTGATGGGCCCTAAAAGCTAAATGCAG GTGCATTAACAGTTGTTAGAAATCATGATACTGAGTAAATGTTTGAAAGAGTTAGAAAGTGATAGAAAAGAGAGATGGAATAGAAGATGAATGTAATTGT CATAGTGAGTTTGTATATATACAAATTGTACAGAAAGATATTGTAGAGAAATTTTCTCAATTACAACTAAGATTTACTCCCTATTTTAAGGAATTTAATA ATGAATACAACAATAAGGACGâBLAST |
Tissue | pods |
Gene name | LI_gene_182570; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_460416
Blastp | CSC1-like protein RXW8 from Arabidopsis with 61.35% of identity |
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Blastx | CSC1-like protein RXW8 from Arabidopsis with 61.35% of identity |
Eggnog | transmembrane protein 63C(COG5594) |
Kegg | Link to kegg annotations (AT1G58520) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458484.1) |
Pfam | Late exocytosis, associated with Golgi transport (PF13967.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |