| Id Trinity | TRINITY_DN51132_c1_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_460410 |
| Sequence | CAAAAAAGAAAAAGAAAAAGAAATTGAAAGTAATGATAATGCTGTTTGTTGCTGTGACTAATTAGCTACGATTCCTTGTTCGCTTTACTTTTTTATTCGA TTTATTTTTTCTGGCGAAACTTTTAAAGACGAAACCATAAGCCCACACCACAATTCTTACGGTTTTCATTTTTTTTCTTGTTTCACATACCAATCTTTCT TTAGCGTAAACGTTTCTGTAAAGTTCAATTGAAGCATTTCAACCATTCTTCAAGTTTTTCACCGTTTTATATAATCCTACATTTTTCGTTTGTTTTTTCA TCCAAGCTATTTTTTTAATATTTTCTAGATTCTTCTATCACTGTTTTGCTGATAATTGATCCGTGTCGACGAATTGTTCATCATCCTTATGCTGGTACAT TTCGCTTTTGTTTTTCTATTTTCCAATTTATTTAGGTTCGGGTTATATATGGAGATAGAAAGCCTGCAATTTACTCAATTGATTCTGATCATTTTTTCTT TCTTTTCTACTGGAACTTTGATGTTCCTACCCTCTTAGTTCGGAGGAGTTGTTTTGTTGTTCTGCGTTTCGTGTAATTGGCGATACAGAAAGAAATTACT GGCTTTACTAATTCTACTAACCTCTAAAAGCTGTGTGATGCATGGGTGATGAGTTGTGCCAAACTTGCTAATACGGTGGGAAGGGATGAACATTGCTGCT CTTTTAACTTCTGCTGGAATTAATATCGCCATATGCGTGGTGCTCTTTTCATTATATTCGGTATTAAGGAAACAGCCGGGTAATGTGAGTGTGTACTTTG GACAGAGGCTATCCTCTCAACGTTCAAGACGCCTTGATCAATGTTTAGAAAGATTTGTTCCTTCCCCTAGCTGGATATTGAAAGCATGGGAAACATCTGA GGATGAGATACTGGCCACTGGTGGCCTAGATGCTGTGGTTTTTGTCCGGATACTTGTGTTCAGTATCCGAATATTTTCCATTGCTGCTGTCATCTGCACT CTTCTAGTGCTTCCAGTGAATTATCATGGCGGCGAAAGAATGCATACACATATACCTTTTGAGTCACTGGATGTATTTACCATTGGGAATGTCAAAGAAG GTTCAAAGTGGCTTTGGGCTCATTGTCTTGCATTATACATCATAACATTAGCGGCTTGTACTCTTCTTTACTTTGAATATAAAAGCATTACTAATTTGAA GCTGGTACATATCATTGGATCCCCTCCAAATCCAAGTCATTTTGCAATTCTTGTCCGATCAATTCCCTGGTCTTCAGAAGAATCATATTGTGACACGGTG AAAAAATTCTTCTCATATTACCATCCATCGACATATTTGTCACACCAAATGGTTTATAAGTCTGGTACAGTTCAGAAATTGAAGGATGATGCAGAACATG TGTGTAAGGTAATTAGAGATACTTCATTGGAAAATACTTGTAAGCCAAGTTTTACGCAATGTTGGTGTTCTGGAGGAACAACAAATTCTTTTAAGATGAT TTCTAATGAGATAGATATAGAGAGCGTACATGGGAGAACAGGATACACCGACAAACATTTAGATGAAAGTAAAAAGGAATGCCCAGCTGCTTTTGTGTTT TTTAAAAATAGGTATGCTGCTCTTATGGCTGCACAGACTCTTCAATCATCAAATCCTATGTTATGGGTGACAGACCTAGCTCCTGAACCACATGATGTTT ACTGGTCCAATATTTGCATACCTTATAGACAGCTTTGGATCCGTAAGATAGCTACACTTGTGGCTTCTATAGTCTTCATGATTGTGTTCCTTATCCCTGT CACATTTGTACAAAGCTTGACTCAACTAGACAATCTTCAGAAAATGCTACCTTTTATGACAGAGATGCTTAAAAAGAAATTTGTGGTTCAGGTGGTGTCT GGTTACCTACCAAGCGTGATATTGGTTTTATTTTTGTGTGCTGTTCCACCAGTTATGATGTTATTTTCTTCAGTGGAGGGGTCTATTTCTCGTAGTGGAA GGAAGAAGAGTGCATGCTGCAAAGTCTTGTACTTCACAATCTGGAATGTGTTTTTCGTTAATGTTTTTGCGGGTTCCATTATCAGTCAGCTCTTAGTCTT TTCTAGCGTAACAGATCTGCCTACTCAACTTGCAAAGGCAGTGCCATCACAGGCTACCTTCTTCACAACCTATGTTTTCTCATCTGGTTGGGCGAGTTTG GCAATTGAAGTTATGCAAATTTATCCCCTTCTATGCAATCTGTTCCGGAGAGTCATACTCAGGATTAAGGATGATTCACAGGGTGGAAGCCTATCTTTTC CTTATCATACAGAGATTCCAAGGATCTTACTATTTGGATTCCTCGGGTTCACCTGTTCTATTCTGGCACCCCTTATGTTGCCCTTCTTACTATTCTACTT TTTCCTTGCTTACCTTGTCTACCGAAACCAGGTTAGTACTTCTATAGTGCTTGTTTTCTCCTTTCTCATTATGGAATTGATTGCGCTTAATTCTTTTCTT TATGCACAACAACTTAACTAATTTCTGTATGGAGATTCTTCTTATTTATGTTTTCATATTTCATTTTAGGCATTAGTATCTATTAGGGACCATTCCCACC AATTTGATTAACTACTGGGGAATAAGTTTAGGTAAGGGGACAGCATGGTTCATGTTACCCTGTTTTAAAAAATGTGAAGTTATTTATAATATGAAGAAAT TGTTCATGAGAGACAAGAACTGGAACTTAAAGTTAATACTTATGGCTTGCATGAACCTTAGTAGTAAGGAGATTTCTCTTCTTTTGGACTGATAAGAGCA GACTTACAGAATAGGAGCTTGCATGGACCTTAATAGTAATGTCATTTGGATTTGTTATATTGTATTAAGGTCTTGCATGCAAGTTTCAGAAATTAGAAAC TCTGAATGCTTGAATCTCACAACTCAATAGGCTGTTTGTAGAGTTTAATTCATTAATTTTCTATATATTGGTAGTTTCTCCACATATATCTACCCAGTCC CCTCACTTTTCTAGCCATTGGAGATAATTTAATTGGGAGTGAAATAGGTGGCTTTAAAAACACTAGTGATGTATAGATCTTTGCATGGAATGATATGTGA TAATGTTTAATTTTGGTTTCTAGGACAACTTACTAGACTAAATATATTCTGCAGTCCACTTAATGATCTCATTTGAAATACTTAATGTTCCTTTGATTTA TTCTTAACCCAGAAAAAGGATTTCCCCTAATATCCGCCTTTTCAGATTATCAATGTCTACATTGCAAAATATGATAGTGGGGGGCAGTTCTGGCCCATCG CTCACAACACAACGGTCTTTTCATTAATCGTTGCTCAAGTTATTGCGCTTGGGGTATTTGGACTAAAACGTTCGACAGTTGCATCTGGATTCACCATTCC ACTGCTGATTGGTACCCTTCTATTTCACCAGTATTGTAGGCAACGATTTCTCCCAGTATTTAGGAGCAATTCAGCTAAGATTCTTGTTGACATGGATAGA AGAGATGAGCATGGTGGAAGGATGGGAGATATGTACGAGCATTTGCGTTCATCGTATGACCAATCCAGTTTAATGCAGGATGCCTCATACCAACCTCAAT GCTTTGGTCATTATGAGAACAAGAGGAATGATAAGTGTTCAGAAGATACAGAGAAAGGCAAGGAAATTATTCAAAAAGATGATAGACCATGGTATGTTAA CCGCACTTTGAGTTCGAAAGCGGTACTGGGTGCGAAGTAAATTAGTTATTCAGTTTGATCATTGTATTATATTAAATAATCTTGATGTGCCATATAAGCT AAAAGTGCTGGTGCATGGATAATTTATAGAAATCATGATCACTGAAAAAATGACTGAGAATAAGAAAGTGATGGAAGATTTTTGGTAGAAAAGAGAGGTA ATGGGAGATGAATGTAATTCACATTGTCAATTTGTCTGAATACCCTTTCTGTCTTGCTCCATTTGGGAAGACATTAGAGATTTTTTTCCAAATTCAACTA AGACTTGCTCTCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_182570; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_460410
| Blastp | CSC1-like protein RXW8 from Arabidopsis with 63.03% of identity |
|---|---|
| Blastx | CSC1-like protein RXW8 from Arabidopsis with 60.26% of identity |
| Eggnog | transmembrane protein 63C(COG5594) |
| Kegg | Link to kegg annotations (AT1G58520) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458484.1) |
| Pfam | Late exocytosis, associated with Golgi transport (PF13967.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |