Ll_transcript_460412

• Id Trinity: TRINITY_DN51132_c1_g1_i8
• Name Transcript: Ll_transcript_460412
• Sequence: CAAAAAAGAAAAAGAAAAAGAAATTGAAAGTAATGATAATGCTGTTTGTTGCTGTGACTAATTAGCTACGATTCCTTGTTCGCTTTACTTTTTTATTCGA TTTATTTTTTCTGGCGAAACTTTTAAAGACGAAACCATAAGCCCACACCACAATTCTTACGGTTTTCATTTTTTTTCTTGTTTCACATACCAATCTTTCT TTAGCGTAAACGTTTCTGTAAAGTTCAATTGAAGCATTTCAACCATTCTTCAAGTTTTTCACCGTTTTATATAATCCTACATTTTTCGTTTGTTTTTTCA TCCAAGCTATTTTTTTAATATTTTCTAGATTCTTCTATCACTGTTTTGCTGATAATTGATCCGTGTCGACGAATTGTTCATCATCCTTATGCTGGTGATG CATGGGTGATGAGTTGTGCCAAACTTGCTAATACGGTGGGAAGGGATGAACATTGCTGCTCTTTTAACTTCTGCTGGAATTAATATCGCCATATGCGTGG TGCTCTTTTCATTATATTCGGTATTAAGGAAACAGCCGGGTAATGTGAGTGTGTACTTTGGACAGAGGCTATCCTCTCAACGTTCAAGACGCCTTGATCA ATGTTTAGAAAGATTTGTTCCTTCCCCTAGCTGGATATTGAAAGCATGGGAAACATCTGAGGATGAGATACTGGCCACTGGTGGCCTAGATGCTGTGGTT TTTGTCCGGATACTTGTGTTCAGTATCCGAATATTTTCCATTGCTGCTGTCATCTGCACTCTTCTAGTGCTTCCAGTGAATTATCATGGCGGCGAAAGAA TGCATACACATATACCTTTTGAGTCACTGGATGTATTTACCATTGGGAATGTCAAAGAAGGTTCAAAGTGGCTTTGGGCTCATTGTCTTGCATTATACAT CATAACATTAGCGGCTTGTACTCTTCTTTACTTTGAATATAAAAGCATTACTAATTTGAAGCTGGTACATATCATTGGATCCCCTCCAAATCCAAGTCAT TTTGCAATTCTTGTCCGATCAATTCCCTGGTCTTCAGAAGAATCATATTGTGACACGGTGAAAAAATTCTTCTCATATTACCATCCATCGACATATTTGT CACACCAAATGGTTTATAAGTCTGGTACAGTTCAGAAATTGAAGGATGATGCAGAACATGTGTGTAAGGTAATTAGAGATACTTCATTGGAAAATACTTG TAAGCCAAGTTTTACGCAATGTTGGTGTTCTGGAGGAACAACAAATTCTTTTAAGATGATTTCTAATGAGATAGATATAGAGAGCGTACATGGGAGAACA GGATACACCGACAAACATTTAGATGAAAGTAAAAAGGAATGCCCAGCTGCTTTTGTGTTTTTTAAAAATAGGTATGCTGCTCTTATGGCTGCACAGACTC TTCAATCATCAAATCCTATGTTATGGGTGACAGACCTAGCTCCTGAACCACATGATGTTTACTGGTCCAATATTTGCATACCTTATAGACAGCTTTGGAT CCGTAAGATAGCTACACTTGTGGCTTCTATAGTCTTCATGATTGTATTCCTTATCCCTGTTACATTTGTGCAAAGCTTGACTCAACTAGACAATCTTCAG AAATTGCTACCTTTTATGACAGGGATGCTTAAAAATAAATTTGTGATTCAGGTGGTGTCTGGTTATCTACCAAGTGTGATATTGGTTTTATTTTTGTGTG CTGTTCCACCAGTTATGATGCTATTTTCTGCAGTGGAGGGATCTATTTCTCGTAGTGGAAGGAAGAAGAGTGCATGCTGCAAAGTCTTGTACTTCACAAT CTGGAATGTGTTTTTTGTTAATGTTTTTGCCGGTTCCATTATCAGTCAACTCTCAGTCTTCTCTAGTGTAAGAGATCTGCCTGCTCAGCTTGCGAAGGCA GTGCCATCACAGGCTACCTTCTTCACAACTTATGTTTTATCATCTGGTTGGGCAAGTTTGGCAATTGAAGTTATGCAAATTTGTCCTCTTTTATACAATC TGTTCCAAAGAGTCATACTCAGGGTTAAGGATGATTCAGAGGGTGGCAGCCTATCTTTTCCATACCATACAGAGATTCCAAGGATCTTACTATTTGGATT CCTTGGCTTCACCTGTTCTATTCTTGCACCCCTAATGTTGCCCTTCTTACTGTTCTACTTTTTCCTTGCTTACCTTGTTTACCGAAACCAGATTATCAAT GTGTACATTACGAAATATGATAGTGGGGGACAGTACTGGCCCATCGCTCACAACACAACGGTCTTTTCATTAATCGTTGCTCAAGTTATCGCACTTGGGG TGTTTGGACTAAAACACTCATCAGTTGCATCTGGGTTCACCATTCCTCTGCTGATTTGCACTCTTCTATTTCACCAGTATTGTAGGCAACGATTTCTCCC AATATTTAAGAGCAATTCAGCACAGGTAAACCCTCCTTGTACTGTCTTCTCCACTCAATTGTCTCATTCACTGATTCACCCCTTAACTCCGAAATAATGA CAATAAGAGTTTGATTGCGAGTGGGATTTTAGATGGAAAAAATTCAGAGTCATCTCACAAATGTATTTCATGTTTTCAGACCTTTCTCTTTATCTCAGTC ACTCTCTAAAAACCAACTCGCAAACATCTTATCAGAGTTTTGTTATATTTTTAAATTTTTACTTTAATGAGTAACAAACATTTGATTGGCTGTGTCTGAT AAGCATTGTGCCTATATAACATTCATGCTAAATAAATTGAGTCTGTTTTAGATTCTTATTGACATGGATCTGAGAGATGAGCATAGTGGAAGCATGGGAG AAATATATGAACATTTGAGTTCAGCCTACAGCCAGTCCAGTTTAGTGCCGGATGCCTCAAACCATACTAAATGCTTCAGTAATCGTGAGGACAAGAGGAG TGATCAGTCTTCAGAAGATATAGAGAAGGGTTTGCCTTCACCAAATGGTTGGAATTTCACTTTTCTATCATAATGGATATAATAACTTGACACTTTTCAC TTTTCACTTTTCAGGCAAGGAAGTTATTCAAAAAGAATGATAGGCCATGGGATGTTAACTGCACTTTGAGTTCGAAAGAGGTACCTAGTGAGGAGTAAAT TAGTTCTTCAGTTTGTACATTATGTATTAAATCATGTTGATGGGCCCTAAAAGCTAAATGCAGGTGCATTAACAGTTGTTAGAAATCATGATACTGAGTA AATGTTTGAAAGAGTTAGAAAGTGATAGAAAAGAGAGATGGAATAGAAGATGAATGTAATTGTCATAGTGAGTTTGTATATATACAAATTGTACAGAAAG ATATTGTAGAGAAATTTTCTCAATTACAACTAAGATTTACTCCCTATTTTAAGGAATTTAATAATGAATACAACAATAAGGACG
• Tissue: pods
• Gene name: LI_gene_182570;
• Additional information: details;

Expression of Ll_transcript_460412

FPKM

• PAB: 0.4
• PNAB: 0.3
• PS1: 0.3
• PS2: 0.6
• PS3: 0.4
• PW1: 0.2
• PW2: 0
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_460412

• Blastp: CSC1-like protein RXW8 from Arabidopsis with 64.96% of identity
• Blastx: CSC1-like protein RXW8 from Arabidopsis with 64.96% of identity
• Eggnog: transmembrane protein 63C(COG5594)
• Kegg: Link to kegg annotations (AT1G58520)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458484.1)
• Pfam: Late exocytosis, associated with Golgi transport (PF13967.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;