Ll_transcript_459750

• Id Trinity: TRINITY_DN51133_c1_g3_i2
• Name Transcript: Ll_transcript_459750
• Sequence: CTAAACCTAGTTCCATATTATTAAAACAAACAATAATTTCCTCTCCTTATTATGAACCTAACCCCACACAGGTTAACACTTCTGCAAAAGTGAGTAGTAT CCATGGCACAGTAAGAACACTCAAAGAGTGAGTGAAACTGTGGAGCATTGTTGAGAGCAACAAAACTTGCACTAACTCAACACTCACCAACCCTTTTCTT CAATCAACAATGCTCCAAAAAACCTGCATTTTACTTATATTCTCTGTTTTTGGTTACTTTTTACCACTTGGAACATCAATGCTGAACTTAACTCTTCCAG GAACACACCCTGACCCTGAAGCTGTTGCTCATGAAGTTCATAGGAAGATAAATGCTTCAATCACAAGAAGAGAAATGCTAGCATTATCACAGAAAGATGA ATCATCATGCCTAACAGGTAACCCAATTGATGATTGTTGGAAATGTGACCCAGATTGGCCCAACAACCGTCAAAGGCTAGCAGATTGTGCCATTGGGTTT GGCCAATATGCAAAAGGAGGAAAGGGTGGTGAATTTTACATTGTTACTGATTCATCTGATAATGATGCTGTTAACCCAAAACCAGGAACACTTAGATATG CAGTGATACAAAATGAGCCACTTTGGATAGTGTTCCCAAGTAACATGATGATTAAGCTTTCTCAAGAGTTGATTTTTAATAGCTATAAGACCCTTGATGG ACGTGGTGCTGATGTGCACATTGTGGGTGGAGGATGCATTACTCTTCAGTTTATAAGCAATGTCATTATACATAATATTCATATCCATCATTGTCATCCC TCGGGGAACACAAACGTGCGGTCAAGCCCAGAGCACTATGGGTATCGCACAGAATCAGATGGTGATGGTATATCAATATTTGGATCAAAGGATTTATGGA TTGACCATTGCACCCTTTCACGTTGCAAAGATGGGTTGATAGATGCAATTATGGGTTCCACAGGGATCACTATATCAAACAACTTCTTCTCTCATCACAA TGAAGTTATGCTACTTGGCCATAGTGACCATTACACTCCTGACTCAGGCATGCAAGTTACTATTGCCTTCAATCACTTTGGGGAAGAACTCGTGCAGCGC ATGCCAAGGTGCAGGAGGGGTTACATCCACGTAGTTAACAATGATTTTACCCGATGGGAGATGTATGCTATTGGTGGCAGTGGAGAACCCACCATCAACA GCCAAGGGAACCGTTACATGGCTCCAACTAACCCTTTTGCTAAGGAAGTTACTAAGAGGGTTGATACTGAGGAAGGAATGTGGAAGGGGTGGAATTGGAG GTCTGAGGGTGATATCATGGTTAATGGAGCCTTCTTTGTAGCTTCTGGTGAAGAGGTTGAGGTTAAGTATGAGAAAGCTTATAGCGTCGAGCCTAAATCG GCCGATCGAATAAGTATACTCACCATGTCCGCCGGTGTTCTTGGCGTTGCCAGGGACAACAACCTTGGAATGTGGAGCAGAGGACCCAATGGTGAAGGTG ATGACATAACATATTCAGGAGGAGTTGATTACTCAGATGAAATGTCCCTTAGTGCAAGGGTTGTTATACCACCTTTGCTTACTTTCACTATTCTTCTTTC ATCTTTTCTATTGTTGTGTTTTGTGTCTTATAGAATACCATTAGTTGTTATTCTATAACACTTAACAATTCAAGAACCGTGCGTCTTCAATGTATTGTGG CGCTGTTTCTTTTTTCATTGGAATGAAAAGGGTCTGGTCCTAAAGTTAAAGGTCAGGCACCATTTAAGACTGTATATATATTTTTCACCTTCATCATTGA ACTCTTTTTTAATGTGCT
• Tissue: pods
• Gene name: LI_gene_182578;
• Additional information: details;

Expression of Ll_transcript_459750

FPKM

• PAB: 0.1
• PNAB: 42.9
• PS1: 46.5
• PS2: 7.7
• PS3: 15.6
• PW1: 29.1
• PW2: 3.8
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_459750

• Blastp: Probable pectate lyase 12 from Arabidopsis with 74.27% of identity
• Blastx: Probable pectate lyase 12 from Arabidopsis with 77.78% of identity
• Eggnog: pectate lyase activity(COG3866)
• Kegg: Link to kegg annotations (AT3G53190)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425862.1)
• Pfam: Pectate lyase (PF00544.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;