Ll_transcript_459800

• Id Trinity: TRINITY_DN51133_c4_g1_i15
• Name Transcript: Ll_transcript_459800
• Sequence: TTAAGAAACTAATCCTTCAAAGTGTGTGGATCTCCCTCGTAGATTTGAGTATAAGGTAAAAAAAGAAGAATGAAAATAATATTTTAGGATTTACTTTTTT GTATTCAATTTCAAATTCTACTCATGAAACAAAAACAAGATAATACAGAGTCAGGGATGAAAAGGGCCCAATAGCGCGAGAGAAAATGGCGCCGCTGAAA TCTCTGGAGAATGAGTATCCAATTATCGACTCTAATTTTCAAAGCTTTTGTGCTTCCCACACCATTTTCTCTGTTGAAGATTTCCTCCTTTACGATCTCG ATGCACTAATCGCTTTTGCCGATAATGATCACACTTGTTCACACACATTGAAGCAGGATTGATGCATTGCTTGGAGGTGGGTTAAGTGAAGGACAATTAA CTGAACTTGTTGGGCCATCCTCTTCTGGCTTGCCTGCTGTCTGCCTCGACTGTTGCAAAACATAAGAGTTCAGTTATATACTTAGATACAAGCAACTCCT TTTCACCGCAGCGTATTGCACATTTGGTTGGTCAGACATCTGGTTATGTCTTTAACAGCCAGG
• Tissue: pods
• Gene name: LI_gene_182586;
• Additional information: -

Expression of Ll_transcript_459800

FPKM

• PAB: 0.1
• PNAB: 0
• PS1: 0.3
• PS2: 0
• PS3: 0
• PW1: 0.2
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_459800

• Blastp: -
• Blastx: DNA repair protein RAD51 homolog 4 from Arabidopsis with 62.5% of identity
• Eggnog: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage (By similarity)(COG0468)
• Kegg: Link to kegg annotations (AT1G07745)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019454026.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;