| Id Trinity | TRINITY_DN51141_c0_g3_i11 |
|---|---|
| Name Transcript | Ll_transcript_460774 |
| Sequence | GTTCTATCCTTTCCTTGAGATTGTGACCAAGAATCTAACCCAAAAGAAAACAATCTCTTACAAAAATGAGACACATAGGTCTAATCTGCACCCTTCTTAT AGCCAACATACTCATGGCTACTCGTCTTACTCTTTCTCTCACTTCCTCTCGTTCCATTATTCCCCCACTCCTTAACCACACTCGTCGTTCCTTTTTTCAC CCTAAACAATTCCCTAAATCCTATTCCTGTCCCCTTTGGTCTTCTTCCTTTTCTTTCTGCCTTGACACTCTTCACAAATCAACTTCACCACTTTCCTTCA CTTCTTCTTCTTCTCCTTCTTGTTCTTCTTGTTCTTGTTCTTTCTCATCCATGGCTTCTTCTGCATCACTTCATGACGACGTCGCATCTAACCCTCTTCT CCAGGATTTTGAATTCCCTCCTTTTGATGCCGTTGAACCCAAACACGTGCAACCTGGCATTCGTGCACTCCTAAAAAAGCTGGAAAGTGATTTAGAGGAA TTGGAACGAAACATTGAACCCTCATGGTCGAAGTTAGTGGAACCGTTGGAGAAGATCGTTGATCGATTGTCTGTTGTTTGGGGCATTGTCAATCATCTCA AATCTGTTAAGGATAGTGCGGAGCTTCGTTCTGCCATCGAAGATGTTCAGCCTGAAAAAGTGAAGTTTCAGCTTAGACTGGGCCAAAGCAAACCGATTTA TAACGCATTCAAAGCCATTCAAGAGTCTCCTGATTGGCAGACGCTGAGTGAAGCTCGCAAACGTATAGTTGAAAGCCAGATAAAGGAGGCTGTCCTTAAT GGTGTTTCTCTTGAAGATGATAAGAGAGAACATTTTAACAGAATTGAACAGGAGCTAGAAAAGTTATCACAAAAATTTGGAGAGAATGTTCTTGATGCTA CAAAGAAATTCGAAAAGCTAATCACAGATAAAAATGAGATTGAAGGCTTACCTGCTACTGCTCTTGGGTTGGCTGCACAAAGTGCAGTGTCTAAGGGACA TGAAAATGCCACTGCTGAGAATGGTCCATGGGTCATTACCTTGGATGCTCCAAGTTATATTGCTGTCATGCAACATGCTCGTAACCGTTCTTTACGTGAG GAAGTCTATCGTGCATTTGTATCACGTGCATCTGGTGGAGAATTGGATAATACAGAAATAATTGAGCAAATTTTAAAGCTTAGGTTGGAAAAGGCCAAGC TTCTGAACTACAATAACTATGCGGAGGTTAGCATGGCAACAAAGATGGCAACTGTTGATAAAGCAGAAGAACTTCTGGAGAAGCTTCGCAGTGCTTCCTG GGATGCTGCAGTGCAAGATATAGAAGATCTTAAGAAATTCTCCAAAAGTCAGGGTGCATCAGAGGCTGATGATTTGACACATTGGGACTTTGCCTTTTGG AGTGAAAGGCTTCGTGAGTCAAAATATGATATAAATGAGGAAGAGCTTCGTCCGTTTTTCTCTCTGCCTAAGGTTACCGATGCACTCTTCAGTCTTGTAA AGACACTTTTTGGCATTGAAATTGAGTCAGTTGATGGTCTAGCTCCGGTTTGGAACAAAGATGTTAGGTTTTACCGTGTTAAGGATTCTTCAGGTAGTCC AATTGCATATTTCTATTTCGATCCTTATAGTCGTCCTTCTGAAAAAAGGCAAGGTGCATGGATGGATGAAGTTTTTGCTCGTAGTCGTGTATTAGCACGC AATGGTACCTCAACAAGGTTGCCTGTTGCACACATGGTGTGCAATCAAACACCTCCGGTGGGAAACAAGCCAAGTCTAATGACATTTCTTGAGGTTGAGA CAGTTTTCCACGAATTTGGCCATGCTCTTCAACATATGCTTACCAAGCAAGATGAGGGTTTGGTTGCTGGTATTAGAGGAATAGAGTGGGATGCTGTTGA GTTACCTTCTCAGTTCATGGAAAATTGGTGTTACCATAGAGAGACGTTAATGGGCATTGCAAAGCATTTTGAAACTGGGGAGAGTCTCCCTGAAGAAGTA TATTTGAAGCTTGTTGCTGCTAGAACTTTTCGTGCGGGCTCTCTGAGTCTTCGACAGATAAAATTTGCAAGTGTGGATCTGGAACTTCATACAAAATATG CTCCAGGGGGACAGGAATCTATCTACGATGTTGACCGTAGAGTTTCTGAGCGGACTCAAGTGATTCCTCCATTACCAGAGGACAGGTTTCTTTGCGGCTT TAGTCATATATTTGCAGGTGGCTATGCAGCTGGATACTATAGTTACAAGTGGGCGGAGGTGTTGTCTGCTGATGCTTTCTCTGCATTTGAGGATGCTGGA CTGGATAACAGCAAGGTATATTTGATAGAGGAAATCTATCAATGCTGACTTTATTGTTGTAGGGACATGCTTGCTTAATTTTCAAAATCCCTCATGTTTC ATAATTACTTATGATTGAATAAGCATAGTAGCCTATCTCCTTCTGTCACTTTTTAATTTAAAAAATATTAGTATGTTATTCATCTTAGTAATGGCACTGG TGGGACATCTGAAGATTCCTATGCTTTGTGAGGTTACTATTTATTTAATTTTTGGCAAGTTAAGTTTACTATTACTGCTGGTTGATTTTACATTTTTCTA CTTTATTAATTGTTAACAATTCAACATTATATGTCCCACATTCTTGTGTGGGATATCCAATCATAAGTTAGGTTTTCCTACATTGGATAGGAGGGTAATT ATTAGATTAACAAGACAAGCCACATACCTATAACCAGTCTGTACAAGGCTTTTGAGTTTTAGCCCCTGTTTTGACCAGTGCTATCTGACATGAGAGAAAA TGAAAAATGGCGTTTTGCAGCACGGATGAGTAGAGTAAAATGGGTGAGAATATGAGATTGGTGTATCTGGTTCCTTTTGTTAATAACAGAGAAAACAAGT ATCATGTGCAGGGTCCGAAACAATGATGGAGTGTGTGAGGAGGGTGAAGGCCTAGAATTTGATACTTACAATCAGAAAATAATTTTCACAGGTTCTTGGC AAGCCTGATAGTGTTATCATATAATTGTAGGATAAACTAGGTGGACCACATATGGAATACCAAACATGTGATAAAAGAGACATGCTATACCCTCCAGGAA GTCCTCTTACGCAGTTCAATTTGACACATTACATGCTATATTTGTGGAGTATTAGTTAATCTTGACTTTTCAGCATTTTCTCCTTTTCCATGTAAGTAGG AGGATTTGTTGGAAAATATCTAGTGATAAAAATAGGGCATGGACTATAAACTTATGCTACTAGGCTTTATACTATGTAACATAGATTAGTGGAGTTTTGT TGTTTTGGTAGTACCACCTTTAGGCTTGAAATTTGGGTGTTTGTGTCTTAGTGGTTTTGGATTTTCCTACCTTGGTAAAGAAAGGAGAGATTATTTTGCA CTTTCAAAAGTGATACTTTCAAGTTTCAAGCAATAAGTAGCTATTGTATAAATCTGATTTTTTCTTTCCTCTCCTCCGGTTTCATTTTCCTCAATTGGTG ATATGATCCTGCATATTCATAAACTTTCTTAAATGATTTATAGTGTCTACATAATTATAATAATCAAACATTGGTATGGGATGTTTCTGCTTTCGAGTGT TGGTTATCACATCTACCGGAGCCCTTGTTTAGTTAGACCGTTTCTCTACTTGCTACATTTGATTGTGTTCATTTTGTATGAAAACAGGCTGTTCAAGAAA CCGGACACAAGTTCCGGGAAACCATTCTTGCTCTTGGAGGTGGCAAGGCACCATTAGAGGTCTTTGTGCAATTCCGTGGGAGAGAACCAACACCAGATGC TTTGCTCAGGCACAATGGCTTACTATCTGCTTCAGCATAGAGTTGGCTCAATTGTATTCATAACTGGGAATGTTTTTACATTTACATTTTAGAATAACTT TAACCTGAAACATTTACAGGAAATATAATCAAACATGTTTACCAAGTTATGGGCCATTAATCTCAGCTATTTGTCAATTTATTTTATTTATCAATGACTT AGATTGAAACATCATTGAAGGTGCATCTTACTATCTTAGAGTGAGTCACCAATAAACGTGATGTATGTAATGTTGGAATTTTTTGGTTAATAGCTAAATA TTGAAATTTAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_182676; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_460774
| Blastp | Organellar oligopeptidase A, chloroplastic/mitochondrial from Arabidopsis with 77.94% of identity |
|---|---|
| Blastx | Organellar oligopeptidase A, chloroplastic/mitochondrial from Arabidopsis with 80.11% of identity |
| Eggnog | oligopeptidase a(COG0339) |
| Kegg | Link to kegg annotations (AT5G65620) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445352.1) |
| Pfam | Apolipoprotein A1/A4/E domain (PF01442.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |