Ll_transcript_460756

• Id Trinity: TRINITY_DN51141_c0_g3_i3
• Name Transcript: Ll_transcript_460756
• Sequence: CCTATATAGTCTTTAAAGAAATACTTCAAATAAAAAAATGATGTTATTTCAGTACCACTAATCTTTATCTTGAAGACAAATTTTATAGAAAAGTTGCAAG AATTTCTAAAATATTTCTAACTTATTTGGTTGAATGTTGTAAATAAATTACTAATCCACAATTTATAAAATATGTAATTAGACTAGACTTTTTAATTTCA AAAATCTGTTGTTGCGTGTAAGAAGTGTTCTCATACTTTTTTTTATTCCTACAGGAGTTTTTTGGCCACTTGAGTAGCCATTTTTTTTGTTCTCTAACAC CATATTGTGCCATATTGTATTAATGGAAAGTTTCAAAATTTGGGTTATTGTACTTTTCATGTTCTGGCTATTATTTTCATGCTTTGCTAATTGTTCACTC CTTTGAATAATGAAACTACTTCCATTGCTTTTAATATCTCAGTGTGTTGTCATTGAAACTTTTATGCTGCCTTGTATAACTTAAACTTTTGCTATTATGT TGCACAGGAAGAGCTTCGTCCGTTTTTCTCTCTGCCTAAGGTTACCGATGCACTCTTCAGTCTTGTAAAGACACTTTTTGGCATTGAAATTGAGTCAGTT GATGGTCTAGCTCCGGTTTGGAACAAAGATGTTAGGTTTTACCGTGTTAAGGATTCTTCAGGTAGTCCAATTGCATATTTCTATTTCGATCCTTATAGTC GTCCTTCTGAAAAAAGGCAAGGTGCATGGATGGATGAAGTTTTTGCCCGTAGTCGTGTTTTAGCACGCAATGGTACCTCAACAAGGTTGCCTGTTGCACA CATGGTGTGCAATCAAACACCTCCGGTAGGAAATAAGCCAAGCCTAATGACATTTCGTGAGGTCGAGACTGTCTTCCATGAATTTGGTCATGCTCTTCAA CATATGCTCACTAAGCAAGATGAGGGTTTGGTTGCTGGCATTAGAGGAGTAGAGTGGGACGCTGTCGAGTTACCTTCTCAGTTCATGGAAAATTGGTGTT ACCATAGAGAGACATTAATGGGTATTGCAAAGCATTATGAAACTGGGGATAGTCTCCCTGAAGAAGTGTATTTGAAGCTTGTTGCTGCTAGAAACTTCCG TGCTGGCTCTCAAAGTCTTCGGCAGATAAAATTTGCAAGCGTGGATCTGGAACTTCATACAAAATATGTTCCAGGGGGACAAGAATCTATCTACGATGTT GATCGCAGAGTTTCTGAGCGAACTCAAGTTACTCCTCCATTCCCAGAGGACAGGTTCCTTTGCAGCTTCAGTCATATATTTGCAGGTGGCTATGCAGCTG GATACTATAGTTACAAGTGGGCTGAGGTGTTGTCTGCAGATGCCTTCTCTGCATTTGAGGATGCTGGACTGGATAACAAAAAGGCTGTTGAAGAAACAGG ACACAAGTTCAGGGAGACCGTTCTTGCTTTGGGAGGCGGCAAGGCACCATTAGAGGTCTTTGTGCAATTCCGTGGGAGAGAACCAACACCGGATGCTTTA CTCAGGCACAATGGTTTATTATCAGTGCCAGCTTCAGCATAGACTTCACTCTATTCTATCTAATAAGTGGGAATATTCTGACGTTTTCATTTTTATGATA ATTTTAACTTGCAACATTTAAAGGAATTTAAATTTTGAAATCAATTACCTTTCTATTTTGTTTTTGTTTTTTATGAAGTCTTTTGCAAAATAATTAAACA ACGCTGCGTGCCCACCCATTCCCTTCTATAAGCACTCAATTTCCCTTCCATAAGTACACTGCATTGAATATGATTTTTGCTTCACAACCGCAAAGACGTT AAACATAATCATTATAACAGAATGGTATTCTAGTTAAGTTAAATAAATTCAATTTGTTTCTGTCTTGCTTCATTCACAAACCCGAGAAAACCATAAGGCC CCATAAGGTAAAAGTTTAAGAACATTCTATATAGCTTCACAGCCGCACTAGCCATTTCTCTCTATTTCCCCATCTTGCCCCATTAATCATGTTCAAAAAA TCTGTGTTACTAGTGTTGCC
• Tissue: pods
• Gene name: LI_gene_182676;
• Additional information: details;

Expression of Ll_transcript_460756

FPKM

• PAB: 0.7
• PNAB: 0.5
• PS1: 0
• PS2: 0.2
• PS3: 0.2
• PW1: 0.5
• PW2: 0.4
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_460756

• Blastp: Organellar oligopeptidase A, chloroplastic/mitochondrial from Arabidopsis with 85.19% of identity
• Blastx: Organellar oligopeptidase A, chloroplastic/mitochondrial from Arabidopsis with 84.53% of identity
• Eggnog: oligopeptidase a(COG0339)
• Kegg: Link to kegg annotations (AT5G65620)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445352.1)
• Pfam: Peptidase family M3 (PF01432.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;