Ll_transcript_460768

• Id Trinity: TRINITY_DN51141_c0_g3_i6
• Name Transcript: Ll_transcript_460768
• Sequence: TTCATTCTCTTATAAGGAACATACTCGTTTAACTCTAATTCGCACTTTGTCCTCTTCTTCCCTCACATCCATGGCATCTTCTGCATTACTCCAAGACGAC GTCGCATCCAACCCTCTTCTCCAGGATTTCGAATTCCCTCCTTTTGACGTCGTCCAACCCAACCATGTGCGACCCGGCATTCACGCACTCATCAAGAATC TGGAAAGTGATTTGGAGGAATTGGAACGAAACATTGAACCATCGTGGCCCAAGTTAGTTGAACCGTTGGAAAAGATCACGGACCGTTTGTCTGTGGTTTG GGGCATTCTGAACCATCTCAAATCTGTTAAGGATAGTTCCGAGCTTAGGTCTGCTATTGAAGATGTTCAGCCAGAAAAAGTGAAGCTTCAGCTTAGACTA GGGCAAAGCAAGCCCATTTATAATGCGTTCAAAGCCATTCGTGAGTCTCCTGATTGGGAGACGCTGAGTGAAGCTCGCAAACGTATAGTTGAAAGCCAGA TAAAGGAGGCGATTCTTAATGGTGTTTCTCTTGAAGATGATAAAAGGGAACATTTTAACAGAATTGAACAGGAGCTGGAAAAGTTATCACAAAAATTTGG TGAGAATGTTCTTGATGCTACAAAGAGATTTGAAAAGCTAATCACAGATAAGAAAGAGATTGAAGGATTGCCTGCTACTGCTCTTGGGCTGGCTGCACAA AGTGCAGTGTCTAAGGGGCATGAAAATGCCACTTCTGAAAATGGGCCATGGGTAATTACATTGGATGCTCCAAGTTATATTGCTGTTATGCAACATGCTC GCAACCGCTCTTTACGTGAGGAGATCTACCGAGCATATATATCACTGGCATCTAGTGGAGATTTGGATAATACAGAAATAATTGAGCAAATTTTAAAACT TAGGTTGGAAAAGGCCAAGCTTCTCAACTACAATAACTATGCTGAGGTTAGCATGGCAACAAAAATGGCAACTATTGATAAAGCAGAGGAACTTCTAGAG AAGCTTCGCAGAGCTTCCTGGGATGCTGCAGTGCAAGATATAGAAGATCTTAAGAAATTCGCCAAAAGTCAGGGTGCACCAGAAGGTGATAATTTGACAC ACTGGGACATCAACTTTTGGAGTGAGAGACTTCGTGAGTCAAAATACGATATAAATGAGGAAGAGTTGCGGCCATTTTTCTCTCTGCCAAAGGTTATTGA TGCGCTATTTAACCTTGCAAAAACACTTTTTGGCATTGAAATTGAGTCAGCCGATGGTCTAGCTCCGGTTTGGAACGATGATGTTAGGTTCTTTCGTGTT AAAGATTCTTCAAGTAGTCCAATTGCATATTTCTATTTCGATCCTTATAGTCGTCCTTCTGAAAAAAGGCAAGGTGCATGGATGGATGAAGTTTTTGCTC GTAGTCGTGTATTAGCACGCAATGGTACCTCAACAAGGTTGCCTGTTGCACACATGGTGTGCAATCAAACACCTCCGGTGGGAAACAAGCCAAGTCTAAT GACATTTCTTGAGGTTGAGACAGTTTTCCACGAATTTGGCCATGCTCTTCAACATATGCTTACCAAGCAAGATGAGGGTTTGGTTGCTGGTATTAGAGGA ATAGAGTGGGATGCTGTTGAGTTACCTTCTCAGTTCATGGAAAATTGGTGTTACCATAGAGAGACGTTAATGGGCATTGCAAAGCATTTTGAAACTGGGG AGAGTCTCCCTGAAGAAGTATATTTGAAGCTTGTTGCTGCTAGAACTTTTCGTGCGGGCTCTCTGAGTCTTCGACAGATAAAATTTGCAAGTGTGGATCT GGAACTTCATACAAAATATGCTCCAGGGGGACAGGAATCTATCTACGATGTTGACCGTAGAGTTTCTGAGCGGACTCAAGTGATTCCTCCATTACCAGAG GACAGGTTTCTTTGCGGCTTTAGTCATATATTTGCAGGTGGCTATGCAGCTGGATACTATAGTTACAAGTGGGCGGAGGTGTTGTCTGCTGATGCTTTCT CTGCATTTGAGGATGCTGGACTGGATAACAGCAAGGTATATTTGATAGAGGAAATCTATCAATGCTGACTTTATTGTTGTAGGGACATGCTTGCTTAATT TTCAAAATCCCTCATGTTTCATAATTACTTATGATTGAATAAGCATAGTAGCCTATCTCCTTCTGTCACTTTTTAATTTAAAAAATATTAGTATGTTATT CATCTTAGTAATGGCACTGGTGGGACATCTGAAGATTCCTATGCTTTGTGAGGTTACTATTTATTTAATTTTTGGCAAGTTAAGTTTACTATTACTGCTG GTTGATTTTACATTTTTCTACTTTATTAATTGTTAACAATTCAACATTATATGTCCCACATTCTTGTGTGGGATATCCAATCATAAGTTAGGTTTTCCTA CATTGGATAGGAGGGTAATTATTAGATTAACAAGACAAGCCACATACCTATAACCAGTCTGTACAAGGCTTTTGAGTTTTAGCCCCTGTTTTGACCAGTG CTATCTGACATGAGAGAAAATGAAAAATGGCGTTTTGCAGCACGGATGAGTAGAGTAAAATGGGTGAGAATATGAGATTGGTGTATCTGGTTCCTTTTGT TAATAACAGAGAAAACAAGTATCATGTGCAGGGTCCGAAACAATGATGGAGTGTGTGAGGAGGGTGAAGGCCTAGAATTTGATACTTACAATCAGAAAAT AATTTTCACAGGTTCTTGGCAAGCCTGATAGTGTTATCATATAATTGTAGGATAAACTAGGTGGACCACATATGGAATACCAAACATGTGATAAAAGAGA CATGCTATACCCTCCAGGAAGTCCTCTTACGCAGTTCAATTTGACACATTACATGCTATATTTGTGGAGTATTAGTTAATCTTGACTTTTCAGCATTTTC TCCTTTTCCATGTAAGTAGGAGGATTTGTTGGAAAATATCTAGTGATAAAAATAGGGCATGGACTATAAACTTATGCTACTAGGCTTTATACTATGTAAC ATAGATTAGTGGAGTTTTGTTGTTTTGGTAGTACCACCTTTAGGCTTGAAATTTGGGTGTTTGTGTCTTAGTGGTTTTGGATTTTCCTACCTTGGTAAAG AAAGGAGAGATTATTTTGCACTTTCAAAAGTGATACTTTCAAGTTTCAAGCAATAAGTAGCTATTGTATAAATCTGATTTTTTCTTTCCTCTCCTCCGGT TTCATTTTCCTCAATTGGTGATATGATCCTGCATATTCATAAACTTTCTTAAATGATTTATAGTGTCTACATAATTATAATAATCAAACATTGGTATGGG ATGTTTCTGCTTTCGAGTGTTGGTTATCACATCTACCGGAGCCCTTGTTTAGTTAGACCGTTTCTCTACTTGCTACATTTGATTGTGTTCATTTTGTATG AAAACAGGCTGTTCAAGAAACCGGACACAAGTTCCGGGAAACCATTCTTGCTCTTGGAGGTGGCAAGGCACCATTAGAGGTCTTTGTGCAATTCCGTGGG AGAGAACCAACACCAGATGCTTTGCTCAGGCACAATGGCTTACTATCTGCTTCAGCATAGAGTTGGCTCAATTGTATTCATAACTGGGAATGTTTTTACA TTTACATTTTAGAATAACTTTAACCTGAAACATTTACAGGAAATATAATCAAACATGTTTACCAAGTTATGGGCCATTAATCTCAGCTATTTGTCAATTT ATTTTATTTATCAATGACTTAGATTGAAACATCATTGAAGGTGCATCTTACTATCTTAGAGTGAGTCACCAATAAACGTGATGTATGTAATGTTGGAATT TTTTGGTTAATAGCTAAATATTGAAATTTAAA
• Tissue: pods
• Gene name: LI_gene_182676;
• Additional information: details;

Expression of Ll_transcript_460768

FPKM

• PAB: 1.2
• PNAB: 0.7
• PS1: 0.4
• PS2: 0.3
• PS3: 0.6
• PW1: 0.2
• PW2: 1.1
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_460768

• Blastp: Probable cytosolic oligopeptidase A from Arabidopsis with 81.48% of identity
• Blastx: Probable cytosolic oligopeptidase A from Arabidopsis with 81.48% of identity
• Eggnog: oligopeptidase a(COG0339)
• Kegg: Link to kegg annotations (AT5G10540)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019420944.1)
• Pfam: Peptidase family M3 (PF01432.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;