Ll_transcript_462427

• Id Trinity: TRINITY_DN51146_c0_g2_i17
• Name Transcript: Ll_transcript_462427
• Sequence: CAAAAAATCATCCCTAAGTGTATTATCTTCTGGGAGATTTAGCAGGAGAATTTGGGAATTAAAAAAAAAACAAAAGCAGACCTGTCTCTCACATTTCCCA TTATTTTTTTTAACTGCCTGCCGTAACCACCACCCACTCCTACTCTTCTGCCGGGCCTCCACCGTCGCTTCCTCAAAACCAAACCGGCGGCACCGCCCTC TTTCAGCGGTGATCTCAGCCTAAGGTCAGCGCTGCCGGTTAAAACTCTACACCTATAAAGTAAAAGAAGAAACTCTTTCGGTTCGAGAACCTTCTCAGCC TCTTTTCTTAATTCAATTCTATTCAATTCCAGCTTTTCATTTTTGCAAAACGCAAATCGAACAGAGCACGATAATCGTAACATCAGCTTCCAATTCAGAA CTGGTGTCGTCGATTGGAATTTGGTCATTGCTTCCTTGCATCCTGCATGGAAAAACTCGAAAGTGAAAGCATGAGCTCTTGTAGATATGTACTTAAGTGA AGAGAAATTTTCAGCATTGTTGCTTTTAACTATAGGTTGTTGAGGGCACTACTCCTCAATCAATACTTATTGATTGTTTGAATTATGGGATGATGATACC TTTTTTTTGGTTGCACGCAGTGGAGAATTTGAGGGAAGACATGATTCCTACTGTCTAACTAACCTACTCTTTACTTGCACTTTTGGGTTTTAAATCATTA TATTGTACCTAAAGTTCATACCTTCTTTTTTGCCATTTTGGTTGCAGTTAGAATTTTCTAGCACATGCTACCATACTCAGTTGATTTCCACAATTAAATG AAATTTATGAAAATAATGGAAGCACTAAATTTCCGATTAAGAGATATTCTTTTTCAGGATCGGATCTACATGCAAATTGTTTGTTACTGATGCAGGTAGT ATGGACTATGGAGATATCATTGTTAAAAATGCTTGTTAGTGGCATATCCTCATTTTTGCATTTATCATTTTCTGGAAAAAAGAACTTAGAACCTGTCACA AAGTATTACCAGAAGGCTGAGGAGATACTTAAGTTGGTGAAGCCAATTATTGATGTGATTGTTAATTCTGAGCTAGCGTCTGATGAAGTGCTCTGTAAGT TATTTGAAGAACTTGGTCATGCTGTTGATGAATTAAGGGAGCACATTGAGAACTGGCACCTACTGTCTCGCAAAGTTTACTTTGTTATGAAAGCTGAACC CTTGATATCTAGGATTCGAACTTCTGGGCTCAATATTTTTCAGCAGCTGAAGGCTTTCCATGATTGCCTCCCTGATGAATTGAGTTCTGAACATGTAGAG CACTGTGTTCAGAAACTTAAGCATTTGGGACACGACAAAACCTCATTAGACATTAAGGAAGCTATTACGGAACAGCAGAATGGTGTAGGGCCGGGTTCAG AGGCAATGACAAAAATTGCTGATAGCCTGGGCTTAAGGTCTAATGAGGAGGTTCTGATTGAGGCCGTGGCCCTTGAAAAGTTGAAAGAGAATGCTGAACA AACCGAACATACTGCAGAAGCTGAATACATTGATGAAATAATTGCTGTCGTGACATGTATGCATGAGCGTCTTGTTATGCTTAAGCAAGCACAGAGTTGC AGCCCAGTCCCAGTGCCTGCTGATTTTTGTTGTCCTCTATCTTTGGAGTTGATGACTGATCCAGTGATTGTGGCATCAGGGCAAACCTATGAGCGGTTTT CATCAAGAACTGGATTGACCTTGGCCTTAATGTTTGTCCAAAGACATGCCAGACTCTGTCTCATACCAACCTAATACCTAATTACACTGTAAAGGCACTA ATCGCAAACTGGTGTGAATCAAACAATGTGAAGCTGGTTGATCCTTCTAAGTCCACAAATTTAAGTCAAGTATCTGTTCTTCATGGGTATTTGGAGTCTG GTACAACCAGGGAATCGCCTGTTTTTGCTCATTCAAGGTGCAACCAGCCATCCTCACCTGAGTCGGTTCGTTCTCGTTCTTTTTGTTCACCAGGGAATAA CTTAACTTCTGGCGGAACCCAGCAAGAGGAAACTCCACCACTGCATCCTCGTTCAACTTCAGAAGGTTCCTTTAGTGGCATGGTTAATGAGCAAAATATG GGTCCTGCAAGAATATCACCCATGGATTTAGTTGACAGATCTGCTAGCTCAGATGAAACCAGTGTAGATTCTACTGGCCAACCATCAATATCGCCACCTA GAAGGGAATCTTCCAGTGTCTTTAGCTCTGAAGAATCTCAAACCCATGCCAGAACTGTTTCTGATTCCAGTGCACTTGCTAACGCAAAACTTCCTCAAGA AACACAGGGCGATGACAACAGTGCTCCTCAACTGTCAACCAGTCCAAGCTACAGTGGAGATGCATCTGGTGAATTGAATCCTGGGCAAGATGCTGCTGGA GCTGCTGCTATGCTATCTCCACATAGACAACCTGAGTTCCCACCCCGTTTTGTGGAGAGAAGATCTCGCAGCCAAGCTATGTGGCGGCGACCATCCGAGA GGCTTGGTTCTAGGATAGTATCTTCTCCTGCTATTGAACCAAGAGCTGATCTGTCAGCAATTGAAAACCAGGTTCGGACTTTTGTAGAGGGTTTGAGGAG CTCTGATTTTGATACTCAGAGAGAGGCAGCAGCCGAACTTCGTCTTCTTGCTAAGCACAATATGGATAACCGAATTTTGATTGCAAACTGTGGAGCCATT
• Tissue: pods
• Gene name: LI_gene_182714;
• Additional information: details;

Expression of Ll_transcript_462427

FPKM

• PAB: 3.2
• PNAB: 3.2
• PS1: 0
• PS2: 0.4
• PS3: 1.2
• PW1: 1.6
• PW2: 3.9
• PW3: 1.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_462427

• Blastp: U-box domain-containing protein 4 from Arabidopsis with 46.83% of identity
• Blastx: U-box domain-containing protein 4 from Arabidopsis with 49.61% of identity
• Eggnog: U-box domain-containing protein 4-like(ENOG410XU9Y)
• Kegg: Link to kegg annotations (AT2G23140)
• CantataDB: Link to cantataDB annotations (CNT0002429)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434108.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;