Id Trinity | TRINITY_DN51146_c0_g2_i9 |
---|---|
Name Transcript | Ll_transcript_462408 |
Sequence | CAAAAAATCATCCCTAAGTGTATTATCTTCTGGGAGATTTAGCAGGAGAATTTGGGAATTAAAAAAAAAACAAAAGCAGACCTGTCTCTCACATTTCCCA TTATTTTTTTTAACTGCCTGCCGTAACCACCACCCACTCCTACTCTTCTGCCGGGCCTCCACCGTCGCTTCCTCAAAACCAAACCGGCGGCACCGCCCTC TTTCAGCGGTGATCTCAGCCTAAGGTCAGCGCTGCCGGTTAAAACTCTACACCTATAAAGTAAAAGAAGAAACTCTTTCGGTTCGAGAACCTTCTCAGCC TCTTTTCTTAATTCAATTCTATTCAATTCCAGCTTTTCATTTTTGCAAAACGCAAATCGAACAGAGCACGATAATCGTAACATCAGCTTCCAATTCAGAA CTGGTGTCGTCGATTGGAATTTGGTCATTGCTTCCTTGCATCCTGCATGGAAAAACTCGAAAGTGAAAGCATGAGCTCTTGTAGATATGTACTTAAGTGA AGAGAAATTTTCAGCATTGTTGCTTTTAACTATAGGTTGTTGAGGGCACTACTCCTCAATCAATACTTATTGATTGTTTGAATTATGGGATGATGATACC TTTTTTTTGGTTGCACGCAGTGGAGAATTTGAGGGAAGACATGATTCCTACTGTCTAACTAACCTACTCTTTACTTGCACTTTTGGGTTTTAAATCATTA TATTGTACCTAAAGTTCATACCTTCTTTTTTGCCATTTTGGTTGCAGTTAGAATTTTCTAGCACATGCTACCATACTCAGTTGATTTCCACAATTAAATG AAATTTATGAAAATAATGGAAGCACTAAATTTCCGATTAAGAGATATTCTTTTTCAGGATCGGATCTACATGCAAATTGTTTGTTACTGATGCAGGTAGT ATGGACTATGGAGATATCATTGTTAAAAATGCTTGTTAGTGGCATATCCTCATTTTTGCATTTATCATTTTCTGGAAAAAAGAACTTAGAACCTGTCACA AAGTATTACCAGAAGGCTGAGGAGATACTTAAGTTGGTGAAGCCAATTATTGATGTGATTGTTAATTCTGAGCTAGCGTCTGATGAAGTGCTCTGTAAGT TATTTGAAGAACTTGGTCATGCTGTTGATGAATTAAGGGAGCACATTGAGAACTGGCACCTACTGTCTCGCAAAGTTTACTTTAAAAGTTATGGTATCAT GCTGCACACATTCATGGGTAAATCTGATGGTAGAGAAATGGTGAAGTTTTTATGTGTAACATGCTTTTCATAAAGCATTACCACCCTCTACATAAGGAAC ATGATGTTAGCCATACATCACTCCAGGTTGCTGTTTGTCTCCACCTTTATGAGATGTAATTATATTACAAGTGAACAGTGCCAGTATCTTCACTCGAATT GGCTTGCTACCTGGTTATGAAAGCTGAACCCTTGATATCTAGGATTCGAACTTCTGGGCTCAATATTTTTCAGCAGCTGAAGGCTTTCCATGATTGCCTC CCTGATGAATTGAGTTCTGAACATGTAGAGGTAAAATATTATATTAATCAAATAGTAGTGTAAAGGTCCCTCGTTTAATTGGATTTATATAAATGTTCAT TACGGGATAGAAACTTAGTATGCATAATTTTGAAGTAAAAATTGCAGCACTGTGTTCAGAAACTTAAGCATTTGGGACACGACAAAACCTCATTAGACAT TAAGGAAGCTATTACGGAACAGCAGAATGGTGTAGGGCCGGGTTCAGAGGCAATGACAAAAATTGCTGATAGCCTGGGCTTAAGGTCTAATGAGGAGGTT CTGATTGAGGCCGTGGCCCTTGAAAAGTTGAAAGAGAATGCTGAACAAACCGAACATACTGCAGAAGCTGAATACATTGATGAAATAATTGCTGTCGTGA CATGTATGCATGAGCGTCTTGTTATGCTTAAGCAAGCACAGAGTTGCAGCCCAGTCCCAGTGCCTGCTGATTTTTGTTGTCCTCTATCTTTGGAGTTGAT GACTGATCCAGTGATTGTGGCATCAGGGCAAACCTATGAGCGGTTTTCATCAAGAACTGGATTGACCTTGGCCTTAATGTTTGTCCAAAGACATGCCAGA CTCTGTCTCATACCAACCTAATACCTAATTACACTGTAAAGGCACTAATCGCAAACTGGTGTGAATCAAACAATGTGAAGCTGGTTGATCCTTCTAAGTC CACAAATTTAAGTCAAGTATCTGTTCTTCATGGGTATTTGGAGTCTGGTACAACCAGGGAATCGCCTGTTTTTGCTCATTCAAGGTGCAACCAGCCATCC TCACCTGAGTCGGTTCGTTCTCGTTCTTTTTGTTCACCAGGGAATAACTTAACTTCTGGCGGAACCCAGCAAGAGGAAACTCCACCACTGCATCCTCGTT CAACTTCAGAAGGTTCCTTTAGTGGCATGGTTAATGAGCAAAATATGGGTCCTGCAAGAATATCACCCATGGATTTAGTTGACAGATCTGCTAGCTCAGA TGAAACCAGTGTAGATTCTACTGGCCAACCATCAATATCGCCACCTAGAAGGGAATCTTCCAGTGTCTTTAGCTCTGAAGAATCTCAAACCCATGCCAGA ACTGTTTCTGATTCCAGTGCACTTGCTAACGCAAAACTTCCTCAAGAAACACAGGGCGATGACAACAGTGCTCCTCAACTGTCAACCAGTCCAAGCTACA GTGGAGATGCATCTGGTGAATTGAATCCTGGGCAAGATGCTGCTGGAGCTGCTGCTATGCTATCTCCACATAGACAACCTGAGTTCCCACCCCGTTTTGT GGAGAGAAGATCTCGCAGCCAAGCTATGTGGCGGCGACCATCCGAGAGGCTTGGTTCTAGGATAGTATCTTCTCCTGCTATTGAACCAAGAGCTGATCTG TCAGCAATTGAAAACCAGGTTCGGACTTTTGTAGAGGGTTTGAGGAGCTCTGATTTTGATACTCAGAGAGAGGCAGCAGCCGAACTTCGTCTTCTTGCTA AGCACAATATGGATAACCGAATTTTGATTGCAAACTGTGGAGCCATT BLAST |
Tissue | pods |
Gene name | LI_gene_182714; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_462408
Blastp | U-box domain-containing protein 4 from Arabidopsis with 46.83% of identity |
---|---|
Blastx | U-box domain-containing protein 4 from Arabidopsis with 46.87% of identity |
Eggnog | U-box domain-containing protein 4-like(ENOG410XU9Y) |
Kegg | Link to kegg annotations (AT2G23140) |
CantataDB | Link to cantataDB annotations (CNT0002429) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019434108.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |