Ll_transcript_461693

• Id Trinity: TRINITY_DN51149_c0_g4_i1
• Name Transcript: Ll_transcript_461693
• Sequence: CTAAATTCACACACATTTCTCTCTCTTTCTTCTTCGTAGTGTTTCTCGAATTTTCCATTTTCTTCAGTGATGAGCGAAATCCACCCACATCAACATTCCA TTATCGCCGATCCAGAACCCGATTCTCCGGTCACCGAACTCCAATCTACGCTTTCTCCAAATGCCAATTTTCTCGATTCAGAGACCCAAGATTCTAGGGT TACGGTTTCTTCAGAGGTAAATTTTGAACTTTCAGATCAAAATACTGTTGATCGATTCGATGATTTAAACAATAGAATTGAGAAGTTTCCAGGTTCTGAT ACCAAATCGAAATCGTTGTTATCGGAATTCGATGATTATGTTGCTGGAAAGAGAGATAGTGATTTAGGTCATGGTTTTGAAGTTGGTGATATGGTTTGGG GAAAGGTGAAATCTCATCCATGGTGGCCTGGGCATATATATAATGAAGCATTTGTGTCGCCGTCGGTGCGTAGAACTAAGAGGGAAGGGAATTTATTGGT GGCATTTTTTGGAGATAGTAGTTATGGGTGGTTTGAACCGGGTGAGTTAATCCATTTCGATCTGAATTTTGCTGAGAAGTCGCAGCAGACGAATTCGAGG ACTTTCTTGAAGGCTTTGGAGGAGGCGGTTGATGAAGCGAGTCGAAGGAGTGGTCTTGGATTGGTGTGTAAATGCGGGAATACTGATAATTTTCGTCAGA CAGATGTTAAAGGGTACTTAGCTGTAGATGTGCCGGAGTATGAGCCTGGAGGGTTTTATTCGAATAATGAAATTAGGAAGGCGAGGAGTAGCTTCAGGCC GAGTGAGGCTCTTGCTTTTGCAAAGCAGTTGGCATTGTCTCCACAAGACGGCGACCATGGAAGCATTGGGTATATTAAGAATAAGGCTATGGCTTTTGCG TATCGAAAGGCAGTGTTTGAGCAACATGATGAGACTTATGCACAGGCTTTTGGGTTGCAGCCATCACGATCTCAGAATAATACAAATAAACAGCCTGCTA AGCAGCCTTCTAGAGCTCCTCTGAGTGGTCCAATGGTGACGGGTGAAGCCTTGGGTAGTGGGAAGAACACTACTAAACCTCTTAAAGTTAAGGACAGTAT GAAAAAAGATAAATATCTTTTTAAGCGCCGTGATGATCCAAGCAACTCTTTCCAGATAGCATACAAGGAGGAAACACCTAATGCAACTGGGCATGATGTA CTTCAAAAGGGGGCTCCCGCTGTGCCTGTGGTGCCTCATAATTTAGAGAAGCATGAAGATACAGGGGTTACAAGTCATGATGTTGTGACTTCAACTTCAG ATGCCAAAGCAACTTTAATAGATGATGAGACTCAACCAGATGGCAGTGGCCTTGCATCCAAAGCCGTTTCCTCTGATGTAGAGCCTCATCTTGTTATGGG GAAGGAATCTCCTGCTGAAATGACCCATAGTTTAGAACTGGATGATGTTTCAAGTAAAAGCTTGGGTAAGTCCGATGTGTCTGGGGTGGTGCCATTGCTC AGCATAATTGATCAGAATGCAAAACAGTCTGGACCAGATGTTGCTAATGGGGGAAATGACTTGCATCAAGCTAAGCATCATGAAATTGCTTTAGTGAAGA AAACTAAAGGTCATAAGCGACCTGCAGATGACTTGAACTCTAAAACTTCTGCTACTGGGGAGAGAAAGAAAAAAAAGAAAAAAGATTTAAATTTACAACC TGCGTCAGGACATCTGGAGAAGCATTCTCCTTCTGGAAAATCTGTACACCTGTCAGGAAAACCTGTGTCAACTGCAATGGCTCCTAGACAGGATTTTCGA ACAGAACAAGTGCAAGGAGATTTTGCTGCCCATAATTTGCCACCAATGGATACCATAGGAGATGCTAGTTTTGAATTGCCGCAACTTTTGGATGATTTGC AAGCTCTTGCTTTGGATCCTTTTCATGATGTTGAAAGGAAGATCCCTGCAGTTGTTCTGAAGTTCTTTTTGCACTTCAGATCTGTTGTTTACCAAAAAAG CTTGTCTACAACACCACCGACAGAGAATGAAGATCATGTAGCTCTTGGTGCTAAATCTCCTTTGACTGTCAAGGCATCTGACAGTCCTGGCCATCATGTC AGAGCTACACCGGTTGTAAAACCTGCAAAACACTTCGTTCGGCCTGATGATCCTACAAAAGCTGGACGGAAAAGGGCACCCTCTGATCGTCAAGAAGAAA TTGCTGCAAAGAGGTTGAACAAGATAACAGATTTAAAGGCACTAGCGGCAGAGAAGGCTGCAGCCAGTCAGAAAACTTCTGAAGCCCGGAGAGGAGAGGA AAAAGAATCCATTTCCCAGGCTGCACCCAAGTTAGTGAAACCAGATTCGAACAGGAAAGTGCAGCGTCCAGCTAAGGTAGTTGAGCCCACCATGCTGGTG ATCAAGTTTCCTCCCCAGACATCACTTCCATCTGTAGCAGAGCTGAAGGCAAGGTTTGTTCGCTTTGGCCCAATGGATCAATCCGGTTTCCGCGTGTTTT GGAAGTCCTCTACGTGCCGTGTTGTTTTCTTGTATAGGGCTGATGCACTGTCTGCATATAAATATTCTGTAGCAAGCCCATCCTTATTTGGCAATGCGGG TGTGAGGTACTTCCTCCGGGAATCTGAGGATTCTACACCTGAAGTCGCTGTAGCTGCCAAGGCTAGGGAAGACACCAGTGCTGCCAATGACACACAGCGG CTCAAGGATCCTGCAGCAGCTCATCACCCGACATCAGTACCATCACGGCAACCTCTTCCACAGCCAACAGCCCAGCTCAAATCCTGCCTGAAGAAATCTA CCGGCGACGAGTCTGGTCAGTCAATAGTTAACGGAAGTAGTAATAAAGGAAACCCACGTGTAAAATTCATGTTAGGTGGAGAAGAAAGTAGTAGTAAGGT GGAGCCATTAATAATGGGTAATAGAAACATCAACAGTGCTAGTTTTGCTGGTGGTGGAGCACCTCCTATTGCAATGGATTTTAATAGTAAGAATGTTGTT CATTTGGTATCTTCTCAACCTCCATTGTTGCCTACACCCCCTGCTACTACACTCTTAAGTAAAACCACACAACATAATTTGCATAATTCCGAATTCGCAA TGGCACCCAGAAACACTCCCAATTTTATAAACACCACTACAAAAGCTACTTCTACTACAAAAGCTACTACTACTACAAAAGCTACTACTTCAACCACAGT TGATATATCACAGCAGATGATAAGCCTTTTAATGAGATGCAATGATGTTGTGAATAACCTTTCTGGGTTATTAGGCTATGTGCCTTACCATCAACTTTGA CAAAAAAAAATGGCACCAAATCCATCCAAATACATCAAGTTTCACCCTTTTTGGATTGTGAATGAATTGCTCAAAAGAATGCAAGAGATACAATCATGGA AGAGGAGGAAAAGTGGGGTTCATACATAAATGTTGAAGTTGAGTTTTAACTGTGGTTCTTGGGCTCCAAAACTAAGTGCATTCTCATGTCCAATGATGTC ATCTTCTTAGTTACATTACCTTTTATTTTTTGTTTTCTAGACTTGTTTTTTTTTAATATTTTAAATTACATTCAAGGTTGTGTAGTTGTTGATATATCAA ACACTAAAGGCACATTATATGCTCTAGTGTGCTACACCTTTGTAAGCTTGTGCCATTGTATGAGATTATACTAGAATTGCCTTTTTATTGTTTCTTGTAT TGCATGTATTTCCCTCACTTAGCAAGTGTTATTTGGAATTTGCTATTGGTAATTCCAATTATCTTTTTTTCTATTGATGAACTTTGTAACATATTTAACA GTTATAGAGTATTATGTCGTCATTGAATCCATGCT
• Tissue: pods
• Gene name: LI_gene_182738;
• Additional information: details;

Expression of Ll_transcript_461693

FPKM

• PAB: 5.2
• PNAB: 5
• PS1: 7.2
• PS2: 6
• PS3: 6.5
• PW1: 4.5
• PW2: 4.7
• PW3: 4.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_461693

• Blastp: Histone-lysine N-methyltransferase NSD3 from Homo with 34.74% of identity
• Blastx: Histone-lysine N-methyltransferase NSD3 from Homo with 34.38% of identity
• Eggnog: Histone-lysine N-methyltransferase(COG2940)
• Kegg: Link to kegg annotations (54904)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019418956.1)
• Pfam: PWWP domain (PF00855.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;