Ll_transcript_460455

• Id Trinity: TRINITY_DN51152_c2_g2_i12
• Name Transcript: Ll_transcript_460455
• Sequence: AGACGAGAAAACGAGGTCGGTGCTTCTGCTCCGTCACGAAAATAAAACGAAATGACCAAAATACCCCGAAATGGTATTTTTCGTAACATGGTTGCAAAAA AATGGAGAAATTGAACCTTATCTGTGAAATTGTGAATGAATAACTATTTAGTGCGTGGAAGTGAAAGCTGTTATTTTTCTGAAACCGGTTTTTTCTTTTC TTTCTGGTGTTCAAAATCCTCCGAGAAAGTTCATACTTCGGAGTCTCCAAGAAAAATAAATTGAAGGAGGAGGATTAACAACATCATCAAAGTATAGCAC GGGAATTTAACAACATCTTTTACATAAAAGGAACAAGGAAAAATCGAAATCCCCATAATTTTTTTCAGCCTCGAGATTTTTGGTTCTGAATCTTGATATT GTTGATTCAATAACGGTAATCAGTAGGTGTTGGAGGAACAATTTATGTGTATATAATCGGGGTTGTTTTCATTGAAAGCAAGGGTTTGACTTTGATTTTT CGGCACCAGAGAAATGAATGTGGTAGGAAAAGTTGGGAGCTTGATAACCCAAGGTGTGTACTCAGTTGCTACTCCTTTTCACCCTTTTGGTGGGGCTGTT GATGTGATAGTTGTTCAGCAGCAAGATGGGACTTTTAGGAGTACCCCTTGGTATGTTAGGTTTGGTAAATTTCAAGGTGTACTTAAAGGCACAGAGAAAA TTGTTCGGGTAAATGTTAATGGTGTTGAAGCTAATTTTCATATGTATCTTGATAATTCCGGGGAGGCTTATTTTATCGAAGAGGTGGATGATGATAAAGG AATTGAGTCAAATGGGGTTGTTCAAGATTCTAATAATGAAGATAATAGTTTTCCCGGTAACGTGCATAGACATGATCATAGTGTCTCTGATTCTGTGGTG CTTCAATTGAAAGGTGAAGGTGATTCCTCCATGTTGCCTCGAATTCAAAGGGCAGAATCTGATGGTGATAGGAGATTTTGCGATTTCCAAGATGACCGAT CTTCTTTCGAAGATCCAATTGAGTTGCCAGAATATGGGTCTAATGCATATGAGAGTCTAGAGGGAGAAAATTTTGAGGACTCACATGGTTCCCATCCAGA GATGGTCTTGGTGAGTGTTGATGGTCATGTATTGACGGTCCCTATCTCAGAATCAGAGAAGAATGAGGACAATGTGCAGTTAAGAAATCCTCAATTTCAT CTCGGCCCAGCTGAAGAGACTGACTTATGTGAAGGTGGTGATGAGTTTAGTTCTGGTGAAAATGCTTGGGCTGCTGATTACATTAGTCGGCTGGATGCTC CAACAGCTAATGTTTCACCAAAACAGTTTGACATTGATGGTGTTGATAATACTTCTGAGATCCCGTTGGAGGTTAGCAAGGAAAGGGATGGACATATTCG TCAAGCACGGGAAACCTTGGGGATTGAAAATCAAGATCTTCGTGTGCAAGCTGATTCTGAAGGCATGGCATCTGGTATACAGAGGGAGAATGTTTTCAAA CATGAATATGAACAAGAGAGCACTGTCCAATCTAAAAACATTGACAAGGTATCTCCAAAATCAGAATTGGGGCTTGAAGAGGTTAAGAGAAATGCATCAG GAGAGGTTGAAATTGCTCCCGATGCTCATTCTGCTACTAGTTATACTGAACGGAATGATGAAAATGTTGGCAAGACAGCATCAGATGATGAGGTAGATGA CAATCAACAAACCCCTGCACTTGAAGACATGAGTAATAATAGTGAGGTAGTTGAACCTCAAATAGAGACTTCAAATAAAGGGGACCAAGTTCATTCAGCT TTGGGATTTGAGATCTCATTATGTGGTCATGAACTTAAGGCGGGTATGGGTTTAACGGCTGCTGCTGAAGTGTTTGAAGCACATACGATATCCGCAGTGG ACTTTACAAGTTCTGCACCTTCATTAATTAAGAATCAAAATCTTGTTGTCAAGTTTAATGATAGGTATTTGACATGGGAAAAGGCTGCTCCTCTAGTTCT TGGAACGGCTGTATTTGGTTTGGATTTACCTGTTGAGTCCAAGGATACAATTCCTGTAGAAGAGGATTATGCACAGGAGTCTAGGGATGATAATCCTGGA TCATCTTCGTCTGGACGCAGATGGAGCTTTTGGCCTATTCCTTTTCGAAAGGTCAAGAGAATTGAGCACACTAACAGCAGCTCATCAAATGATGACATAT TTCTAGATTCTGAGTCTGTATTTTTCGTAGAGCCAAGTCCAACATCCAGTTCCCAGGGATCCCCCCATAAACAACTTGTAAGGACAAATGTTCCCACCAA TGAGCAGATAGCATCCTTGAATCTCAAAGATGGTCAAAATTTGATAACATTCAGTTTCTCTACAAGGGTTCTTGGAACACAACAGGTTGATGCTCATATA TACTTATGGCACTGGAACACAAGAATCGTAATTTCAGATGTTGATGGAACTATTACCAAGTCTGATGTTTTGGGGCAATTCATGCCTTTAGTTGGAAAAG ATTGGACACAATCTGGAGTGGCACAGCTTTTCTCTGCCATTAAGGAAAATGGATACCAGCTACTCTTTCTGAGTGCCCGTGCAATTGTCCAGGCATATCT AACCAGAAAATTCTTGCTTAACCTGAAACAGGATGGAAAAACCTTACCCAATGGACCTGTTGTTATTTCACCTGATGGATTATTTCCCTCACTTTACCGA GAAGTAATTAGAAGAGCACCTCACGAGTTCAAGATTGCTTGTTTAGAGGATATCAAAGGACTTTTCCCTGCTGATTATAATCCATTCTATGCGGGATTTG GCAATAGAGACACCGATGAACTTAGTTACAGGAAGATCGGAATCCCGAAGGGTAAAATTTTTATTATTAACCCTAAGGGTGAGGTGGCTATTAGTCAGCG TATCGGCGCAAGATCTTATACATCGTTACACACCCTAGTCAATGACATGTTCCCCCCAACTTCTTTAGTCGAGCAGTTGCAGGAGGACTTCAACTCCTGG AATTATTGGAAAATGCCATTGCCAGATATTGAGTAGTTCAATGCTCATAATGTTTAATTCCCTCAGGCAAGAGAAGATGTTAACTAAATGCCAGACATTC CCTCCTATGTGACCCATTTTTTGTGCAGATATTGATTAGAGACTGTCCTGCTATGTTGGAATTCATTGTGGGCATGCAAGTTTTAGTAGAACATTGTTCA TTTTGAATCATTATAGTCCACCATCAACAGAATTGTTCAACATTTTCCTTATATTGTATTTTACATACACCATGTATATTTTACGTTCAGGGAATAAATG GCAAAAATGCTTACCAAAGCAACATTTTTTTCTCCAAAAA
• Tissue: pods
• Gene name: LI_gene_182771;
• Additional information: details;

Expression of Ll_transcript_460455

FPKM

• PAB: 1.8
• PNAB: 2.5
• PS1: 11.5
• PS2: 1.6
• PS3: 3.3
• PW1: 10.7
• PW2: 2.8
• PW3: 3.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_460455

• Blastp: Phosphatidate phosphatase PAH1 from Arabidopsis with 53.65% of identity
• Blastx: Phosphatidate phosphatase PAH1 from Arabidopsis with 52.89% of identity
• Eggnog: phosphatidylinositol transfer protein(COG5083)
• Kegg: Link to kegg annotations (AT3G09560)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461646.1)
• Pfam: lipin, N-terminal conserved region (PF04571.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;