Ll_transcript_460470

• Id Trinity: TRINITY_DN51152_c2_g2_i27
• Name Transcript: Ll_transcript_460470
• Sequence: GTTTTGTTCTTTTTTTTTTTTTTTTTTTTCTATTTTCTATTTAATCAGTTATTCAGTTTGTTTAAATCTGTTGTTTTTAATTTTTTTTAATCTTTACTCT AAGTTATTGTATGCCATGCAGTGCTATTGTTTTTTTATCAAGAACCATAACCAGTGGAAAGTGTTGGAGGGAACATTATATGTGTTAGATTGGGGTTGTT TTCATTGAAAACAAGGTTTAGACTTTGAGGCTGGTTTGTATATTTTTGGTACAAGAAAAAATGAATGTGGTAGGAAAAGTTGGGAGCTTGATAACCCAAG GTGTGTACTCAGTTGCTACTCCTTTTCACCCTTTTGGTGGGGCTGTTGATGTGATAGTTGTTCAGCAGCAAGATGGGACTTTTAGGAGTACCCCTTGGTA TGTTAGGTTTGGTAAATTTCAAGGTGTACTTAAAGGCACAGAGAAAATTGTTCGGGTAAATGTTAATGGTGTTGAAGCTAATTTTCATATGTATCTTGAT AATTCCGGGGAGGCTTATTTTATCGAAGAGGTGGATGATGATAAAGGAATTGAGTCAAATGGGGTTGTTCAAGATTCTAATAATGAAGATAATAGTTTTC CCGGTAACGTGCATAGACATGATCATAGTGTCTCTGATTCTGTGGTGCTTCAATTGAAAGGTGAAGGTGATTCCTCCATGTTGCCTCGAATTCAAAGGGC AGAATCTGATGGTGATAGGAGATTTTGCGATTTCCAAGATGACCGATCTTCTTTCGAAGATCCAATTGAGTTGCCAGAATATGGGTCTAATGCATATGAG AGTCTAGAGGGAGAAAATTTTGAGGACTCACATGGTTCCCATCCAGAGATGGTCTTGGTGAGTGTTGATGGTCATGTATTGACGGTCCCTATCTCAGAAT CAGAGAAGAATGAGGACAATGTGCAGTTAAGAAATCCTCAATTTCATCTCGGCCCAGCTGAAGAGACTGACTTATGTGAAGGTGGTGATGAGTTTAGTTC TGGTGAAAATGCTTGGGCTGCTGATTACATTAGTCGGCTGGATGCTCCAACAGCTAATGTTTCACCAAAACAGTTTGACATTGATGGTGTTGATAATACT TCTGAGATCCCGTTGGAGGTTAGCAAGGAAAGGGATGGACATATTCGTCAAGCACGGGAAACCTTGGGGATTGAAAATCAAGATCTTCGTGTGCAAGCTG ATTCTGAAGGCATGGCATCTGGTATACAGAGGGAGAATGTTTTCAAACATGAATATGAACAAGAGAGCACTGTCCAATCTAAAAACATTGACAAGGTATC TCCAAAATCAGAATTGGGGCTTGAAGAGGTTAAGAGAAATGCATCAGGAGAGGTTGAAATTGCTCCCGATGCTCATTCTGCTACTAGTTATACTGAACGG AATGATGAAAATGTTGGCAAGACAGCATCAGATGATGAGGTAGATGACAATCAACAAACCCCTGCACTTGAAGACATGAGTAATAATAGTGAGGTAGTTG AACCTCAAATAGAGACTTCAAATAAAGGGGACCAAGTTCATTCAGCTTTGGGATTTGAGATCTCATTATGTGGTCATGAACTTAAGGCGGGTATGGGTTT AACGGCTGCTGCTGAAGTGTTTGAAGCACATACGATATCCGCAGTGGACTTTACAAGTTCTGCACCTTCATTAATTAAGAATCAAAATCTTGTTGTCAAG TTTAATGATAGGTATTTGACATGGGAAAAGGCTGCTCCTCTAGTTCTTGGAACGGCTGTATTTGGTTTGGATTTACCTGTTGAGTCCAAGGATACAATTC CTGTAGAAGAGGATTATGCACAGGAGTCTAGGGATGATAATCCTGGATCATCTTCGTCTGGACGCAGATGGAGCTTTTGGCCTATTCCTTTTCGAAAGGT CAAGAGAATTGAGCACACTAACAGCAGCTCATCAAATGATGACATATTTCTAGATTCTGAGTCTGTATTTTTCGTAGAGCCAAGTCCAACATCCAGTTCC CAGGGATCCCCCCATAAACAACTTGTAAGGACAAATGTTCCCACCAATGAGCAGATAGCATCCTTGAATCTCAAAGATGGTCAAAATTTGATAACATTCA GTTTCTCTACAAGGGTTCTTGGAACACAACAGGTTGATGCTCATATATACTTATGGCACTGGAACACAAGAATCGTAATTTCAGATGTTGATGGAACTAT TACCAAGTCTGATGTTTTGGGGCAATTCATGCCTTTAGTTGGAAAAGATTGGACACAATCTGGAGTGGCACAGCTTTTCTCTGCCATTAAGGAAAATGGA TACCAGCTACTCTTTCTGAGTGCCCGTGCAATTGTCCAGGCATATCTAACCAGAAAATTCTTGCTTAACCTGAAACAGGATGGAAAAACCTTACCCAATG GACCTGTTGTTATTTCACCTGATGGATTATTTCCCTCACTTTACCGAGAAGTAATTAGAAGAGCACCTCACGAGTTCAAGATTGCTTGTTTAGAGGATAT CAAAGGACTTTTCCCTGCTGATTATAATCCATTCTATGCGGGATTTGGCAATAGAGACACCGATG
• Tissue: pods
• Gene name: LI_gene_182771;
• Additional information: details;

Expression of Ll_transcript_460470

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0
• PS2: 0.4
• PS3: 0
• PW1: 1.5
• PW2: 1.1
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_460470

• Blastp: Phosphatidate phosphatase PAH1 from Arabidopsis with 51.78% of identity
• Blastx: Phosphatidate phosphatase PAH1 from Arabidopsis with 50.95% of identity
• Eggnog: phosphatidylinositol transfer protein(COG5083)
• Kegg: Link to kegg annotations (AT3G09560)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461648.1)
• Pfam: lipin, N-terminal conserved region (PF04571.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;