Id Trinity | TRINITY_DN51153_c2_g1_i16 |
---|---|
Name Transcript | Ll_transcript_460725 |
Sequence | TACAAGTCCAATCATGTTTAATTTCTAGGTTCATTTCTTTATATATTAAAGCTCCAAATACAACATCTAAGTAACTAAGTGTTACTCTTGGAGTAAGTCA CTATTCTTGTAGTACCTAGATCTAGCTCCACATTGATGCTTCATTTTTAGTTTTACTTCACTATCATTCTTTTATTTTCTATTGAGCGAGGTCTGAAGTG TGAAATAAAACAAGTGGTTTTTCTCTTCAGTAGAAACAATGAGAAACTCCATTATGCTACAACTACTGTTATGCTTTGTTATTGGTTTAGTAAGTGTATG TGTGGTGCAAGGAGAAGATGCATATAAGTTTTACACATGGACTGTGACTTATGGAACTATTTCTCCACTTGGTACTCCCCAGCAGGTTATTCTTATCAAT GGTCAGTTTCCTGGTCCTAGACTTGACTTGGTAACTAATGACAATGTAGTTCTCAACCTCTTCAACAAGCTGGATGAGCCATTTCTACTTACTTGGAACG GCATTAAACAAAGGAAAAATTCATGGCAAGATGGAGTACTAGGAACCAATTGCCCCATTCCTCCAAACTCAAATTACACTTACAAGTTTCAGCCCAAGGA TCAGATTGGCACTTATTCATACTTTCCATCAACTGCATTCCATAAAGCAGCTGGAGGTTTTGGAGGACTCAATGTTTACCATAGATCTGTTATTCCTATC CCTTATTCAAACCCTGATGGAGATTTTACTTTACTCATTGGTGATTGGTACAAGACCAACCACAAGACATTAAGGCAAACTTTGGATTCCGGAAAATCTC TTGCATTCCCTGATGGCCTCCTTATCAATGGCCAGACTCATACTACCTTCACAGCTAACCAGGGTATGCCTGTTTTATTATAAGTAATGATACACTCACT TTATAAGCATTGATCATCTACAATTGTTATCTTTCAAAGCAAAAGTCTTTTGATCAATGATTGTAAAATAGGCGAGAAAAGGTGCATGAATAAAATTGCT TGTGAGATAGTCATTTTCCTTCTTTTTAAAAGGGTATAGTTGGACTATGAACAAATTCTAAGTGATACATTCAACTTTGTAATTGCATTTACCAACAGTA TTTTGGTTTTGCTTTCAGGTAAAACTTACATGTTCAGGATCTCAAATGTTGGTTTGTCAACCTCAATTAACTTCAGAATTCAGGACCATACCCTAAAACT AGTTGAGGTTGAAGGATCACACACTCTCCAAAACATATACCATTCGCTTGATGTGCATGTTGGTCAATCTGTTTCTGTGTTAGTAACCTTAGATCAACCT CCAAAGGACTATTACATTGTTGCCTCAACAAGATTTTCTCAGACAGTTCTCTCAACAACTTCAGTACTACACTATTCAAACTCTAATTCCCAAGCATCTG GACCCTTGCCTGCGCCACCAACAGACAAATATGACTGGTCCATTGAACAAGCCAGAAGCTACAGATGGAATCTGACAGCAAATGCTGCTAGGCCTAACCC ACAAGGGTCATTCCATTATGGGAAGATAACACCTACCCGAGTAATTAACTTGGCCAATTCAGCACCTTTGATTAATGGAAAGCTTCGTTATGCTGTTAAC AAGGTCTCATATGTTAACTCCGATACCCCTCCGAAGCTTGCTGATTACTTCAACATTCCAGGAATCTTCAATACAAACTTACTTCAAAGCAATGGTCCTG TAACCATAGCTACGTCAGTATTGCCAACTTCTCACCATGATTTTATTGAGGTTGTTTTCCAGAACAACGAAAACGCCATTCAATCTTGGCATCTTGATGG TTATGACTTTTGGGTTGTTGGGTATGTTAGCTTCCTTTATTTGAATTTTGCTTCCAGCTATATTTGTTTTTATTAGTAGGAAAAATCCAACTTTACTTAG AATAATCTTAAGGGACTTTTAATGATGATTGTTAAAATTACATTTACAGTTATGGTTTGGGTCAATGGACAAGTGCAAGTAGAAGTTCCTATAATCTAGT GGATGCCCTGACTAGACACACTGCACAGGTAACTAAACAACAAAACTACCTTATATTCCATATAGTATTAAGATTTATCATGTGCATAATATAATAGTAT ATGTGCCTATTGGTACCTTATGATATGGTTAAAATGAATGAATGCAGGTATATCCAAACTCTTGGACAGTGATATTAGTGTCCTTGGATAACCAAGGAAT GTGGAACCTTAGGTCTGCAATATGGGAAAGGCAATATCTTGGGCAGCAATTCTATCTGAGGGTGTGGAATGCACAACAAAACCTTGCTAATGAATATGAC ATTCCACATAATGCTCTGCTTTGTGGCCAAGCCATTGGAAAACAGCACCCTTAACTAGTTATAATTATCACCAACTATTCATTGGTGTCTTTTCCAGTCA TGAAGGATTGACTACAATTATGAAGTTAAGGGGAACCAAAAACAGGACATAGAGGGAAAAGTTAATTCTCAAATTTCAGGTTGTCTTATATATATATATT TGAGGAAAGTCTTGGTACTAAATTTCCATTGCTCATCTATGTATTAACAATTAATTCATAGTTAATCATTTATTGTTATTATGTATGAAGTGAGTTGGAT AGATTTCATGGTGACTTGGTTGACAAATCATTGTCACATTGGTATGTGGTACGAATACGTGATTTACTTAGTATATATTTCATCATTAAGATGAACCGAT AATAAGGTGACACTATTTATGATACAGCAGATATGCTCCCTCGCTTTGTTAACATTGGACCCTAGCCCCTTAACAATCTCTTGGCAAGTGAATTTTTTTC TACAAGTACTTGGTAGTAGTATATGGCCTGCCTCTATAATAGAAGCACGCCTCATCACAATTTATGCCTGGTTTTGCTAACGATTGTTATACAATGGTGG AGGAACTGAAAATAACAAAAAATGCACTCAATATTCGTGAGGTTTACTAGGATGGAACACAAATCCTTCTAATTTTAAAAACTATACTAACTTCCCTACT ATGACTTTTGTGTTACACTATGCCTTAATGACAAAGATTTAGTTCAAATATTCTCACTCTCTTATCTCTCTTTAATGCGCATGCTAGAGGAGTGGATTAG CATCAATGTAACTAAAAAAATCAAAATAAGGATGTTTGGTGTCATTTTCTAATCTAGATCGCAGCAAAACTCAGCA BLAST |
Tissue | pods |
Gene name | LI_gene_182777; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_460725
Blastp | L-ascorbate oxidase homolog from Nicotiana with 55.45% of identity |
---|---|
Blastx | L-ascorbate oxidase homolog from Brassica with 53.44% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (107766889) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019421361.1) |
Pfam | Multicopper oxidase (PF07732.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |