Id Trinity | TRINITY_DN51154_c4_g2_i7 |
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Name Transcript | Ll_transcript_462072 |
Sequence | CTAGAATTAGTTTCATATGGAGTGTTCCTGGAAATCTAAAACTATATATACCAAGTTACGTGCTAAAATTGATAGGCACATTTCAAAGCTGTCGTTATCC TCTTATGTCTTATGAGTCTTATCCCACCCTCTCCATTATTGTGTGTGTACTCTAATTGAATATTACAATCATTTATTGAACTTTCAAAGACCAAAGTTTC CTCTCAGAATTAGAATCAAGCACAATGATGATTCAAAGAACTGTGTGCTTTTCAAGTTTAAGGAAATTGCTTCATCAGGCTGGTTGTGTTTCTTCTTCGT CTAAGGTTGGAGCTTACAATGGATATGCATCTCAGTCCTCTTCCTCTCTTCCACTCCCCTTCCCATCTTACAGCGGTGAAGAATATGCTGATGTGGACTG GGACAGTCTTGGATTTGGACTGGTGCCAACTGATTACATGTACATTAATAAATGTTCAGCTGGCCACAATTTTGGTGATGGACAACTCAATCGGTATGGC CACATTGAGCTCAGCCCATCAGCTGGAGTACTGAATTATGGCCAGGTATATGTCTTTATCGACATGTATGTGTCAGTTGTTATGATTGGTCAGACTACAC CACTCTCTATCGGTTAGAAAAGTGTTAGTCCAAAACTGAAGTCATTGGTGACAAAATTGTGTCATTCCAATACTCTAGAAGTATTTTTCTGACTAATTAC AACAAGTGACATACTCCGACTTAAATAAATATTTTTTAGAAAATTGTGGTTGCGGTCGTGATTACGGTAATGGTTGGGGTTAGTGTGACCGTTGCGATGC GAATTGTGGTCGTGAATTAATTTGTGAGTAAAAACATGTTTTTGACATGGATGCGGTCTGATGCGGCCTAATGCGGTTGCGTTGGGGCCCATGCAGTCCG ATGCGGTTGCGTTGTGGCCTGTTGCGGTCGCGTTACTGTGATTCGGTATCACACCGCAATTGCGGTATGATGCGGTTCCAGTGGTCACCTCTACCGTAAT ATTGCGGCCCTATCACATGATATGATCCGCATTTTAAAACACTGTTTAGAAAAGAAGGCACAAAAGCATCATACATTTGTGGAACTGTAAACAACAGGGA TTATTTGAAGGCACAAAAGCATACAGAAAAGAAGATGGGAAGCTTTTGCTGTTCCGTCCAGAACAAAATGCAATTCGCATGCAGAATGGAGCAGAGAGAA TGTGCATGATATCCCCTTCTATTGAACAATTTGTTCATGCTTTGAAACAAACTGTCTTGGCAAATAAGCGTTGGGTTCCTCCTCCTGGCAAAGGATCATT GTACCTAAGACCTCTGCTCCTAGGAACTGGTCCAGTGTTGGGTTTGGCTCCTGCACCTGAATACACTTTTCTCATATATGCTTCCCCTGTTCGCAACTAT TTCAAAGAGGGTTCAGCACCCCTTAACTTGTACGTGGAGGAGGATTATGATCGCGCTTCTCGCCGTGGTACTGGAAGTGTTAAAACCATTTCTAATTATG CACCAGTATGTATTTCAATTTTCAAGTCTTTTAATTGAAATCAAATAAAGATCACTGCATCGTCTCATGTATAAAACTGCCAGTACAAAATGCTTATGGA TTTTATTTTAGTTTTGGAGTGAAGTTTAATTTGATTAGGAGTTGGGTTAATTGTACTAACTCTCCTTAACTCATGTGAGTGTCATGAATTGGATGGATCG ATTTCGCTGTATGAAAAATGTTAGTACATGGAGTTAAAAGTATAAACCTTTCTACTTTGGAAAGGAAATGAGATGATACCCTATGCATGATGCTGTTAAG GGTATTCAACTTTACTGCATGTCTTGAAATATAGGTCTTGATGGCACAAATTAGAGCCAAAAGCAGAGGGTTTTCAGATGTGTTATACCTTGATTCAGCC ACCAAGAAAAATCTAGAGGAGGTCTCTTCTTGTAACATTTTTATTGCCAAGGTATTCTTCCAAATATTTTACCTTTTTCTCTTTAATGGTAAACATAGAT TGATGTGTATTTTCAACAATGATGTTTAATATATCATATGATCAATAAACATGCATACTAAGATAGCTAGCACAAGGTTGTAAAAAGAAAAGGAAAATGA CTAGTTTTATATGATCCTAATTGAGTTCAATTGTTATTTTCCTGCTTGTACATGTTCTAAATTATCTGGTGAAATTTACTCAGCACAAAAAGTTATTGGT TATAAATACTTGCAAGTTGCAACCAACCAATCTTCCTTGTATTCTAATTTCCTAGGGCAAATGCATCAAAACACCTGCTACCAATGGAACCATTCTTGCT GGAATTACCAGAAAAAGTGTCCTTGAAATTGCTCGTGATCACAACTATCAGGTAGAAGAACGTGCAGTAACAGTGGATGAGTTGATTGAGGCTGATGAAG TTTTCTGCACAGGTACTGCTGTTGGTGTTGCTCCTGTAGGGAGTGTCACATACCAGGATAGAAGGGTGGAATATATTACAGGCTCTGGAACCATTTGTCA AGAGCTGAATGCAACCCTTTTAGGAATTCAAACTGGTATTATTGAAGATAAGAATGGATGGGTCATTGAAATTAACTGAATTACTTGAGTCACACTCCTC TATGGTGAGAAGATTGTTTTTTTTTTCTCTTTTACTTTTGAAGGTAAAAATTAAATATCTTCACATTGTGAATAAGAGGATGCAAATATCATTGTATGTG ATTTTTTATTATTATTTCATGGTACTTTTAATTACTTATGATTTGATACAAGAAAATGCGACCCAAAAGTGGAGGTCCGTGTATCAATTGTGTTGATATA AAAAAAAGTGTGTTATAGACAATGTTCAATATCAATATGAATTATTTGTCCTTGTTGAATTATGGACAGGGTTTTGTTGGTAG BLAST |
Tissue | pods |
Gene name | LI_gene_182788; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_462072
Blastp | Branched-chain-amino-acid aminotransferase 5, chloroplastic from Arabidopsis with 75.45% of identity |
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Blastx | Branched-chain-amino-acid aminotransferase 5, chloroplastic from Arabidopsis with 76.81% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (AT5G65780) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019437869.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |