Ll_transcript_459963

• Id Trinity: TRINITY_DN51163_c1_g1_i18
• Name Transcript: Ll_transcript_459963
• Sequence: CCATTGTGGTTACTGTTAGAAGGAAATGATAAAGGCAGTAAGATAAGATTGTGACACCAATGTTTTCTTCACACAATATTTTTAAATATTTTCATCTAAT TTGACTTTACACTTCAATTTATATATAAAATTGAACAGTGAAAGTTTCCACTGTAATGATTAAATTTGAACATAATAACCATTGTGGTTACTGTTAGAAG GTTACAGATCCCGGATCTCTCTCCCTTTCAAATGTAATAATAATACTTCTCTTCCTTCAAATCTCATAACCTTATTCAACACACACACTCTCTCTCTCTC TCTCTACTTCTGTCGTTTAACTCTGAAGTGAAGTAACAAACAGACCAAGTTTTGAAACAAAAGCAAAAACGAACGACTTCCTAGATCTGGTGAATGTGTG AAGTTGAAGGTGGCTGGTTTTGGTTTCTCATTTGGAATCGTTAGGGTTTTCAGTTTACTTCTTTTCTCACTATGACTACCAAACGCGCCTACAAGCTACG TATCCTTTGTTAATTTTCTCTTAACATTTCTTTTATCTTTTATTTCATTTTTCTGTAGATCTCTCGCCACTTTTGCTTACTTTTTTTGCTTTTACCTTTT TTTGTCTTATTATATTTTTAACTTTATGGGTGGAACCACATCAAATGTAGTGGGGGTTCATATGTTTTAAAAAGGGCAACCCAGTGCCGAAGTTCGGGAA CGGGAGGGTATATGTATGCAACCTTACTCTTACAAGGAAAAAGTGTCTGTTTCCTTGTTTCTGTTGCTTTAAATAATAAATAATATTATTATTATATTAA ATATATTGTATATTTAAACCAAAGCATAGAAAAAAATATATGTCAAGGGGTGCAGCTGCAATCCCCGAGGCAGGGTTGCAGTCGCGATTGCTTTGTGGGT TGATGCAACCAATTGTGGCCAATGCAATTCACGACTACAGCTTGCTGCTGATGCAATGAGATGTTGTGGTCCGGGATTTATAACCCTGCCTTGAGGTATG CGGTTCTGCCCCTGGCTGGCACAAAGTGATATATTAGTTGGCCTTGACGAGTTTGTTGCAGAGGAGTTTGTAGCGCATGCTTCTAGTGTGAATTGCCTCA AAATTGGAAGGAAGTCATCCAGGGTTCTTGTTACTGGAGGTGAAGATCACAAGGTCAATCTTTGGGCTATTGGTAAACCTAATGCTATACTGAGTCTGTC AGGACACTCAAGCGGAATAGATTCTGTAAGCTTTGATTCCTGTGAAGTGTTGGTAGCTGCAGGAGCAGCAAGTGGTACAATCAAACTTTGGGACTTAGAA GAGGCAAAGATTGTTCGCACTCTTACTGGTCATAGGTCCAACTGTACATCAGTAGACTTCCATCCTTTTGGAGAGTTCTTTGCATCCGGCTCTCTCGACA CCAATCTTAAGATATGGGACATCAGAAAGAAAGGTTGTATTCATACATACAAGGGCCATACTCGAGGGGTAAATGCAATTAGGTTTACTCCAGATGGACG CTGGGTTGTTTCCGGTGGAGAGGACAATACCGTGAAGTTGTGGGATCTGACTGCAGGAAAACTCCTGCATGAGTTTAAGTCTCATGAGGGTCAGGTTCAG TGTATAGACTTTCATCCCAGCGAGTTTCTGCTAGCAACAGGTTCTGCCGATAAGACAGTTAAATTTTGGGACCTTGAAACATTTGAGCTCATTGGTTCAG CTGGTCCAGAGACAACTGGAGTGCGCTCAATTACTTTCAATCCTGATGGGAGAACTCTGCTTTGTGGGTTGCATGAGAGTTTGAAGGTCATCTCTTGGGA ACCTATAAGATGCCATGATATGGTGGATGTGGGTTGGTCTAGATTGTCAGATCTTAATGTTCATGAAGGAAAGCTTCTTGGCTGCTCATACAATCAGAGT TGTGTTGGAGTCTGGGTTGTAGACATCTCGCGCATAGAACCATATGCACTTAATAGTGTGAACCAACTGAATGAATCTTCAAGTGGAAATATGTCTGTGT TGAATGAGAACACTGCTAAGGCTAGGGTATCTATTTCACAAAATCTAGATCCATTAGTCAAGGAAACAAAATCTCTTGGAAGATTGTCAGTTTCGCAAGA TTCGGATCCCTTAAACGAGGGAAAATATTTGGCATCCGTAGGAAGCACACCGAGTACTCCTCAAAGGATCAATTTGAACTCTGCTTCCAGAGCTGCGTCT GGTGGTTCAGCAGCAGGGCCTAATACAACAGTTCAGAAGAGGGCTTCTTTGAGATCTCATACATCATCCAATGTACCTGCTATCAGCAAATCAGATATTA TACCTGTAATTGTTCCCAGAACCAGCATAAGGTCAGAGCCTGGAGTTGAGTCTAGGAAAGAAGTTGGTGTTGCTGGAAGATTGATGTCATTGCCCTTGCA GTCAAGGGCAGCAGATATACATAAATTTTCAAACAGAGATGACGTTGATAAGCCATCAATCTCTCCATCTGAATCAGCTTCAACTCAGGATAGTGAATTG GATACTTCTGTGGATAAAAACAAATTTCCTATGGCTGTAGCCTCAATTCAAGATGAAACTCAAGGGCAGAAAGCAAACAGAGAATTATGCTCTGGTGTAG TACCAAAAGGAGGGAGAATGCGGTCACTTATCAATTTGGAAAAGCGAGAGCGGTCTCTTAACTTTGAGGAACCTACCTCTAGAGTTTCCCATGGAAAGAT GTCATCGGTTTACGTGCTCCCTCTCGATAGGAGAGGACATTCCATGTCCACTGAGAAGGCAACAGTATCGGCAAGTGATGAAGATTCTATCGCTGATGTG ATGGAACAGCATGATCAATTTCTCAGTTCAATGCAAGACCGGTTAGCCAAGTTAAAGGTGGTCTTCCGATATTGGGAAAGAAATGATGTTAAGGGGGTCA TTGGTGCCATGGAAAAGATGGATGATCATGCTGTGATTGCAGATGTTGCTGACATTATTACGGAAAAAATTGATATTGTAACACTTGATATATGTACTGG TCTGATGCCTCTCTTGGCTGGCCTTCTACGCAGTGAAATGGATCGGCATCTAGGAATATCATTGGAAATGCTGTTAAAGCTGGTGAAAATATTTGGCTCA GTAATCTATTCAACTGTATCTGCTTCAACGTCCGTTGGTGTTGATATCGAGGCCGAACAAAGGCTAGAACGGTGTAACCTCTGCTTCATAGAGCTTGAAA AAGTGAAAAGTGTATTACCCTCTCTTCTGAGAAGAGGAGGATTGATTGCGAAGAATGCGCAAGAGTTGAATCTGACTCTTCAGCATGTTTCATGATTCTA ACTAATTTACTGAACTCATTGAATTGGTTCTGCCCTTCGCGTATCTGTTGGTTGCTTTTCGAGGTTTTGTGAATTTTAAGGATTTAAACCTCTCAACAAG GCACCAAAGAGTATGATGCTTTGTCATTGCCATCAATGAAGCCTGACCTGTATGTACATTTATTGCTTTTGACATTTCTGGAAGTGAAGTGGAGGCACTG ATACCTGCTAATTGTACCATTATCACCGAAGCCGGAATTTACGGGCCATGTTACCCTACTGTTGGTGGATGATTGACAGTAGTTCTGACCATAACCAAAC ATAGTGTGCTTGAGGATGAAGATATCATTCTATAATCTATTTGACCACTAACCTAATGTGTAGCACAAGATCTAACTCTGTTTGACCACTAACCTACTGA TATATAATTAATTTGTAGTTTCTGATTTCTATTCAGTTTGGTTCTTTATTTGCCTTTTTGATTGTTTAGTGGTGCCGTTCATATTTTTGCATATTCCTTG TGTCTGCTCACGGTTGTAGTGACATCGTCTTCTATGCTAAGGTTATTGTTTCTTCCACAAATTTACATGATTTCTTACTTTGTTATTCTGCAATAGTTTA TGAATTTAGCTTTAATTTATTAGCAGTATCCTCATTTTAAAGTTTAGAAGTGAG
• Tissue: pods
• Gene name: LI_gene_182840;
• Additional information: details;

Expression of Ll_transcript_459963

FPKM

• PAB: 0.2
• PNAB: 0.7
• PS1: 0.3
• PS2: 0.1
• PS3: 0.6
• PW1: 0.4
• PW2: 0.1
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_459963

• Blastp: Katanin p80 WD40 repeat-containing subunit B1 homolog from Arabidopsis with 57.86% of identity
• Blastx: Katanin p80 WD40 repeat-containing subunit B1 homolog from Arabidopsis with 57.86% of identity
• Eggnog: Katanin p80 (WD repeat containing) subunit B 1(ENOG410XQAC)
• Kegg: Link to kegg annotations (AT5G23430)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019420716.1)
• Pfam: WD domain, G-beta repeat (PF00400.31)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;