Ll_transcript_461067

• Id Trinity: TRINITY_DN51164_c1_g1_i4
• Name Transcript: Ll_transcript_461067
• Sequence: CCAAAAGCGTGACTCTCTCTGAATCCATTGCGATTTTTTGCATATATTTCGCGCCTGACTCAGTGAGTCCAACTCGCTCCGACTACGGAATTTCCGTAAC CCTTGTCGGAGACGATGAACAACAAGTCTTCGCGCACAGATCTCTCAGTCTTCGATTTCAAGGAAGAAGATGAGATCGACGAGGAGAATCAATTCTCCAA ATTCAAAAACCCTATTCAATCCCTCTCTCGCCCCGATTTTCTCCCTCGTGAGGCCCGGGTTGACAATTTTGGTGTAAAGAATGTTGCAAGTACTCCTTCT GTTGATGTTAATGCAGTTGGTGGTAGCTTTAATTTGGAAAAGGGTGGTTCAGATCCCCCTCTGGACACAGTGGGAGTTATATTTCATAGCAAAGAGGAGA ATGCCGAGGAAGAAGCAGTCAAACAATCTTTATCCATTAATCATGAAAATCACTGTCATATAAAAATAGGTATTCATAAATACAATGAACCAGAGATGAA GGATACAAGTGGTGGTGTATCTCCACCTGAGACGAGCCAGATAGATCCTTCAGGGTCTCCATCCGATATAGAATCAGTTGATGCTAATTCAGAGACGGTT GAGTTCATGTATGAGAGTGTGGGAAGAAGTCCTGCCTCCGATAATGCAGAGAATGGCGTATTTAACCTTTCATTGAATGGCTGTGGATTGAATGGCATAT ACAGTTTTGACATGAATGACGCAAATACAGAAGTTGTTCTTCATCCAGATTATGTCATATACCAGGATAATTATTATATGGGGCCGAAGTTAACCTTTTC AGATTGTTGCGTCAAGATCTATGTTTCAACTTCATGTATAAAGCAAGGTGCCTTAGATCTTGAATGGGCAGTTGATGATCTCATTGATATTAAGTGTCAA TTGTTCCAAAGTAGTGAAACGGTCATTATGAAGCTTCACGTAATATCGAGTAACACAAGTCAGTCAAATGGTGTAAGCGGCACTTCAGGCATTGAGGAAT TGGAGATAGCAGTTGTTGATTCCAATTGGTCCCTGAGGCATAGACAGATCACATCTCTTAATATGAAATACTTGGCTATTTGGAATATTGTGCTTAATAC GGATGATGAAGGCAATGAAAATGATTCAGGTGAACCAAGATGCTACTTCCCCAATTTTGAGGAGCCTTTTGATGAAGTTGTCTATCCAAAAGGGGATCCA GATGCTGTTTCCCTAAGTAAAAGAGATGTTGATCTCTTGCAACCAGACACTTTCATCAATGACACAATTATTGATTTTTATATCCAATATCTAAAGAGTC AGATACAAGAAGAGGAGAAGCCTAGATTTCACTTTTTCAATAGCTTTTTCTTTCGAAAGCTGGCTGATATGGACAAAAATCCATCCAGTGCTTCTGATGG CGAGGCAGCATTTCTACGTGTTCGTAAATGGACAAGAAAAATAAATTTATTTGACAAAGATTATATCTTCATACCTGTGAACTTCAATCTTCACTGGAGT TTAATAGTCATTTGTCATCCTGGTGAAGCGGTTAATTTTAATGGTAAAGAGGTGGAGAAGTCACTTAAAGTACCCTGTATTTTGCACATGGATTCTATAA AAGGAAGTCACAGCGGTCTGAAAAATCTCATGCAAAGATACTTATGGGAAGAATGGAAAGAGAGGCATATGAATACATTGGAAGAAGACCTTTCATCAAG ATTCCTTAATATGCGTTTTCTTCCACTTGTGTTGCCCCAACAAGAAAACTCATTTGACTGTGGCCTCTTTCTGCTGCACTATTTGGAACTCTTCCTTGCT GAAGCTCCTTCTAATTTCAATCCATTCAAACTAACCAAGTTCTCCAACTTTCTCAATGTGGACTGGTTTCCACCAGCCGAGGCTTATCTCAAGCGAACAC TTATCCAGAGGTTAATATTTGAGCTCTTGGAAAACCATGGTTCACATGAAAGCTCTTCCTCGGACTGCAGTGATGATGACCACATCTATGTAGAAAATAA TGAGAACAGAACTAGCATGCAGCTTACTGAAATCAATAAGGAGTCCAGTTCCCGTGCTGGGAAGGGAATAGAAATGACTCTGTTGGCGGCGTCATCATCT TTGGATCCTCAATCTTTTAACAATGAAGGCTTGGTTCTTAAGGAGTTTTTTGCGCTAGGAGCTACAGCAGACACATCACTTGGACAATGTCAATCTTTCG ATCAGCAATCATCTGATTATTGTTTTAATGGTTCAATATTTCCAATGGAGGAAGACACAAACATCAGGGAACAACTCATGTATTTGGATGCAGATCATAA CATCCAGCAAGTAGCTGCTGGAATTACACCTCAAACTTGTTCTTTGCAATACTTACCTACGGATTGTGGAGATGAGACTTTTCATACACCTGAGATTTCT CCACGAGCTGAGCATGAGATGGCTGAGTCTTTTCTAGATGCATCAAGTGATGCCTCAGATGATTCAGAAGACATAGGGATCATTGAAAATTTCCCAGTTG AAAATGAAGCCCAATCGTCTAATGAAGTTGGACGAGGTGAAAAAACTTGTTCACTGGAGGAAAACCCTGAGCAATTAACAGATTTTTCTGTTTCTGATGC TAACAATCTTTCGATTACCCCTCTCATTGGAATTTCTCAAACCTGGAATACAAAATCCGATGGTAACAACAACGGAGATCTTCACTCTTCCTCTCAGGAG ATTGCAACAGGTCAACTGGATCATGTTTCTGATGCAGTAGATGACAAGGTAACAAGTGATGGTCAGATGATTGATGACATGGAACCCGATGTTTATGAGG AACAAGCTGCAAAGAGGAGGAGGCTTATACCCTTGAATACCGAGTTGTAGGACTGTTTCATTTGTGAACACGAGGAGTCGGACTGGAGGACCGGATAGCC GGGATGGAACAAGGTTCATGGCATGTATACATCTAGGCAAGGGACTAATATATACCGAGGACTCACATATATAAAAATATATGTATGTAAAAAAATGTAT AGTTTTGTTTAAAAATACTACACACATATGATTATATAAAGTATATGTGAAATATGTTAAGGTTACAACGACGCAAGTGGCAATTAGAGGAATAATCTAA GATTGTTGTAAGATTTTATCTCAAAACAGATTAACAAGTGGAGGCGTAAACCTATTTGTATTTAAATCATTCATGAAATAATGAGGTAATCAATGTGTG
• Tissue: pods
• Gene name: LI_gene_182844;
• Additional information: details;

Expression of Ll_transcript_461067

FPKM

• PAB: 1.1
• PNAB: 1.8
• PS1: 2.1
• PS2: 1.3
• PS3: 0.4
• PW1: 0
• PW2: 1.6
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_461067

• Blastp: Probable ubiquitin-like-specific protease 2B from Arabidopsis with 47.68% of identity
• Blastx: Probable ubiquitin-like-specific protease 2B from Arabidopsis with 50.55% of identity
• Eggnog: SUMO1 sentrin specific peptidase(COG5160)
• Kegg: Link to kegg annotations (AT1G09730)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415425.1)
• Pfam: Ulp1 protease family, C-terminal catalytic domain (PF02902.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;