| Id Trinity | TRINITY_DN51167_c1_g3_i9 |
|---|---|
| Name Transcript | Ll_transcript_461927 |
| Sequence | CTATATCACAGTCCAAATCCAAAGCCTAGTTCTTGTATTATTGTTCCCTCAAGCACTCTCATCTTCACACACCATAAAAGAAGGAGAGTTTCATGGTTTT TGTCTTCCTCTATTTGCACAAATCCCTTGTTTTCTGCTTCAATTTCCTCTTTTTTAATTCGTCCATAGTATTTTTCTCATGAAAATCTTGCTTTAGAGAA CAACTTCAACAACAAGAGGAGTGAAACAACCACCAGTGTTAACATTTTCAATAGATTAATCCCTTTTCTTTGGGCTACCTTCAATGTCAAACATCACAAG TTGTGATAGTGGGAGCTTCTCCACAGAGAATACAACAGAAGATGCAGTTAAACAACAATTAGATATACTTGGTCAGTTCAATAGGCCTCATTCTCATACT TCAACAACAACAAATAATAATAGCAATGTTTCCAACACAAGTTTACAACCATCTCCTTCTACTAAGAGGAAAAGGAGCCTCCCAGGAAATCCAGATCCAA AAGCTGAAGTCATAGCTCTATCACCAAACGCATTAATGGCCACAAACAGGTTCCTATGTGAAATATGCAACAAAGGGTTTCAAAGAGACCAAAACCTTCA ATTGCACCGACGAGGCCATAATTTACCATGGAAGCTTAAACAAAGAACAAGCACAGAAATTATAAAAAGGGTTTATGTTTGTCCTGAACCTTCATGTGTT CACCACAATCCAGCAAGAGCACTAGGTGATCTTACTGGCATTAAAAAGCACTTTTGCAGAAAGCACGGTGAGAAGAAGTGGAAATGTGATAAGTGCTCTA AGAAATATGCTGTTCAATCAGATTGGAAAGCTCATTCTAAGACTTGTGGCACAAGAGAATATAGATGTGACTGTGGAACACTCTTCTCCAGGTAACAAAC CTAACCAATTAATCAGTACTTGCTATTTCACAATTCATTCTTATTTTATAAATCATCTTTATGTTATTGAGGCAATTCAATATTATCGAGATCATTGTTT TAATCGATTTCATCGAAACAATCATGATTTTGATTTTGAATTGCAATCCATAACCGTAATTGCGATCATAATGTTGTTACGACTGCAATTATAGTCACAA TTTAAGTGTATTGTATTTGAAGAAAACATGTTGCCAATTAATGGACAACTTGTGAAGTTTAGGTCTGGTTGGTTTAGTTTAGGGTTTGTTTTATTTTTCA GGTAGCAAGAGGGAAGAAAGTGCCTTAGATGCTTTCTCTTTCTATTTGAGTTTGGTTTTCTACCAATTGATTAAGATTCTCTCTTCTCTTTCCATTTCTC TTGTATGGTTTCCTTTGTCGTTTTACTCTTATATGTTAAATGGAAGGAAACATCCTTCACGTGAATAATCTCTGAAAATCAGAAAACACACACGGAGGAA CAGCACCCTTTTCTTTCTCCAATAAAAGTGAAAAATAAAATCTAACTTTCACATTTTACCTCAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_182885; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_461927
| Blastp | Zinc finger protein MAGPIE from Arabidopsis with 86.75% of identity |
|---|---|
| Blastx | Zinc finger protein MAGPIE from Arabidopsis with 87.67% of identity |
| Eggnog | Zinc finger protein(COG5048) |
| Kegg | Link to kegg annotations (AT1G03840) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452362.1) |
| Pfam | C2H2-type zinc finger (PF13912.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |