Ll_transcript_460331

• Id Trinity: TRINITY_DN51170_c0_g11_i1
• Name Transcript: Ll_transcript_460331
• Sequence: TTGTGGGCACGTTACTCTGAATTATATCCCAAAAATGATCTTGTCTTCACTGTTGGTGTTAGTGACTATAAAAAGGATTGGTTTTATGCTCATGTTACCA GGAAGGTAGGAGACACATACCAGCCAACCGTATGGCAGATTGTATTTCAACTTCAAAATAGCACATCCAAAGGAAATTACACACTTCATCTGGCTCTAGC ATCCTCTAATGGTGCTGAAGTGCAGGTTCGGCTCAATGAGGCCAATGCTCAATCTCCGGTGATCTTTTCAACGGGGCTAATCGGTGGCGACAACGCCATA GCAAGGCACGGCATACATGGCTTGTACTGGCTGTTTAGCATACCTGTACCTAGCAGTCATTTGGTAAGTGGAAAGAACACCATCTATCTGAGGCAATCAA GAGGTAGAACCCCTTTTGCTGGAGTTTTGTATGATTATATCCGCCTAGAAGGTCCTGCAAACTAAGGGTGTTTGATGTGCATATAACTTGTAGTGAGACA ATGTGCTCGTGTGACTATGCATTAGGATTATTTTTTCATTTGACATTTAATCTACAGTCATAGATAGCATGATCAATACCATTGGCTAGAAAGCATAGAT TGTGAAGAAGGAATGTAATAAAGCCAGTCATTAGGTTAATATTTGTGTGTTGTAGATGAAAGAAGTAGTGACAGAC
• Tissue: pods
• Gene name: LI_gene_182914;
• Additional information: details;

Expression of Ll_transcript_460331

FPKM

• PAB: 0
• PNAB: 0.9
• PS1: 1.1
• PS2: 0.2
• PS3: 0.6
• PW1: 0.2
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_460331

• Blastp: Rhamnogalacturonate lyase from Dickeya with 31.97% of identity
• Blastx: Rhamnogalacturonate lyase from Dickeya with 31.97% of identity
• Eggnog: Rhamnogalacturonate lyase(ENOG410YE12)
• Kegg: Link to kegg annotations (Dda3937_01465)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019420624.1)
• Pfam: Polysaccharide lyase family 4, domain III (PF14683.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;