Ll_transcript_462343

• Id Trinity: TRINITY_DN51174_c0_g1_i10
• Name Transcript: Ll_transcript_462343
• Sequence: ATCGTGTAGAAAAAGAAAAAGAAAATAGATTATATATAAGGCCATACCTTACGCCGCGTTTTCACATCTCTCTCTCTTTCTCTCTCTCTATCTTTCTCTC TCATCACTTTTCTCCTTCATCTTCATCTTATCTCAATTCTCTGCAGGATTCCTGCAGGTTCTGTGGCTGAAGATCCAAAGGTGAAGGTGTCACGTTGAAG TTTCTTTCATGTTTGAACAGGCTATCATCCATTTTGGAGCAATTGAGTTGCTTGGAGAGTATTTTTCATCGTCTAGAAAAAAGAACAGGCCATTGCCAAC TATATTTAGCTGCATGCATCGTGCGCCATACCAGGAACATACTGAGTTTTGTAGTTACCTTTGGCTGCGTACTATAATTGCGGAAGGAGAGTGTTTGTGA TTACAATAAGCAATCTACATCGAAGCTGCATATACTTCGAATTCCAGAAATTTCTGCCTGACACATCTAGTGTGTTTCTTTGAGTCTTTTAGTGTTTTAG TCATCATGGCTCTGCAGAACATTGGTGCTAGTAACAGTGATGATGCCTTCTATAGGTATAAGATGCCTAGAATGATAACAAAAATTGAGGGTAGAGGTAA TGGCATTAAAACAAATATTGTCAATATGGTTGACATTTCAAAAGCCTTGGCAAGGCCAGCCGCTTATACAACCAAGTATTTCGGTTGTGAACTCGGAGCC CAATCAAAATTTGATGAGAAAACTGGCACTTCTCATGTTAATGGGGCACATGAAACTGCAAAACTTGCAGGCCTTCTTGAGAACTTCATCAAGAAATATG TCCAATGTTATGGCTGTGGGAATCCTGAAACTGAGATTCTCATTACCAAGAGTCAAATGATCCAGCTGAAATGCGCCGCTTGTGGCTTTATGTCTGACGT GGATATGAGAGACAAGCTGACTACCTTTATCATCAAGAATCCTCCTGAAGCAAAGAAAGGAACCAAGGACAAGAAGGCCATGAGGAGAGCTGAGAAAGAG AGATTGAAGGAAGGTGAAGCAGCTGACGAGGAACTGAAAAAGCTGAAGAAGAAAGTCTCTTCATCTTCAAAGAATGGAACTGTGAAATCTACCTCTTCAA AAAAGAAAGGAAGTGGCTCTGATGAAGACCGCTTGTCACCTACTCACGGTCCAATTGATGAGAAAGAGGCAGCTAGTGATGAAGATGACGATGATGATGT ACAATGGCAAACAGATACATCGATACATGCTGCTCGTCAACGTATCCAAGAACAGCTAAGTGCTGTGACAGCTGATATGGTCATGCTCTCCACAACTGAA CCCGAGAAGAAGAAAAAATCAGCTACTAAGGCAAGCGGTGGTTCTAATGGTAACTCAATGGACCACGGTAAACTGGTTGGGGAAGTGAAAGCAAGCTTGA AGAAAGGCATTGGTGCAAAAGAATTGCAGTCCCATCTGGCATCACTTCCTGGATCTGCTCAAGAGAAGATGCGTGCTCTTTATGAAGTCATACTCGACGG CACGGAGAAAGGGTTTCCTAAAGAAGTAATGAAGAAGAGAAGTTACCTTGCAGCTGCAGTTGCAGAGGAGGGTTCACAGTCGATGTTGCTGCATGCAATT GAGGAATTTTCTGGAAAGTCCAGTTCCAATGCATTGAAGGAGGTTGCACTGGTTTTGAAGGCACTCTATGATGGTGATGTGTTGGAGGAGGAGCACATAG TGCAGTGGTATCAAAGAGGGCTGAAAGGTGATAACAAGGACTCTCAGATTTGGAAGAATGTTAAACCCTTCATTGATTGGCTTCAGACTGCGGATTCAGA ATCAGAGGAAGAATGATCTGCTTCAATTATTTGTTACTGTTTCCTTTGCTTGTGTCTTTTGTTTCAAATAAAGGGTCTTCTGATTTGGCCCCTTGTGTTG TTGAACTTTGTTTTATTTGTTTCTGTTTCCTTTGCATGTCTCTTTTGTTTGGTTTCGCCCCTTGTGTTGTTGAACTTTGGGCATATATGTAACCCTCTCC TTTTATGGAACCAAAAACTTAATGCATTATTATGATGACAATTTAGAAGTTAAAA
• Tissue: pods
• Gene name: LI_gene_182942;
• Additional information: details;

Expression of Ll_transcript_462343

FPKM

• PAB: 89.6
• PNAB: 20.7
• PS1: 47
• PS2: 39.9
• PS3: 53.2
• PW1: 70.8
• PW2: 115.9
• PW3: 171.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_462343

• Blastp: Eukaryotic translation initiation factor 5 from Phaseolus with 80.36% of identity
• Blastx: Eukaryotic translation initiation factor 5 from Phaseolus with 78.95% of identity
• Eggnog: -
• Kegg: -
• CantataDB: Link to cantataDB annotations (CNT0001731)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419270.1)
• Pfam: Domain found in IF2B/IF5 (PF01873.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;