Ll_transcript_462340

• Id Trinity: TRINITY_DN51174_c0_g1_i8
• Name Transcript: Ll_transcript_462340
• Sequence: TATTATATATAGAGAGCGCCGTTTCACAATCTCACATTCTCTCTATCTTTCTCATCTCTCACTCACAGATGTCAGCCTTTCAACTGCGAGAACATTGAAG CATCCAGTTGTTGGCTTGGAATCCCTGCTAGTTCTTCCGAAGCATATTACAAGTTGAAGGCGTCACGTTCAACTTTCTTTCATGTTTGAACAGGCCACTA TCCATTTTGGAGCAACTGAGCTACTTGTATTTTCATCTTCTAGAAAAAATTATAAACCCATACAACAGAGGGCTATCTGTATGCATTCTGAGACATATCT GGAAATCCCTGAAGTTTCTTGTTGTGATTGGCCACCTTCCATTGCTAGAAGAGAGTCTTTGACGATACAAGCAGCCTAGCATTTCCTGCCTCTGATAATA TTCAACCCTTTCTCTTCGAGTCATCATGGCATTGCAGAACATTGGTGCTGGGAATAGTGACGATGCCTTCTACAGGTATAAGATGCCTAGAATGATTACC AAAATTGAGGGTAGAGGAAATGGCATAAAAACAAATGTTGTCAACATGGTTGATATTGCAAAGGCATTGGCAAGGCCAGCAGCTTACACAACAAAGTATT TTGGCTGTGAACTTGGAGCCCAGTCAAAATTTGATGAGAAAACCGGGACTTCTCATGTCAATGGAGCACATGAAACTGCAAAACTTGCAGGCCTTCTTGA GAACTTCATCAAAAAGTATGTCCAATGTTATGGTTGTGGGAATCCTGAAACTGAGATCTTGATTACCAAGACTCAAATGCTCCAGCTGAAATGTGCTGCT TGTGGTTTCGTGTCCGATGTGGATATGAGAGACAAGCTGACTACCTTTATCATCAAGAACCCTCCCGAAGTGAAGAAAGGATCCAAAGACAAGAAGGCCA TGAGGAGAGCTGAGAAGGAGAGACTAAAGGAAGGTGAAGCAGCTGATGAGGAACTGAAAAAGGTGAAGAAAGAGGCTAAAAAGAAAGTTCCTTCTTCAAA AACTGGAACTATAAAGTCTACCTCTTCAAAGAAGAAAGGAAGTGGCTCTGATGAAGAACGTACATCACCTCCTCACAGTCAAATTGAAGAGAAAGAGGTT TCTAATGATGACGATGACGATGAAGATGATGATGTCCAATGGCTAACTGATACATCACTTGATGCTGCTCGCCAACGTATCCAAGAACAGCTTAGTGCTG TGACAGCTGATATGGTCATGCTCTCTACTGAAGAACCTGAGAAGAAGAAAAAACCAGCTAGTAAAGCAAGTGATGGTTCTGAGAATGGTGATGCGAAGGA TAAACTGGCCCGGGAAGTGAAAGCAAGTTTGAAGAAAGGAGTTAGTGCAAAAGAGTTGCAGTCCCATCTTGCAGCACTCCCTGGATCTGCTCAAGAAAAG ATGAGTGTTCTGTTTGAATCCCTTTTCGAGGGAGTTGAGAAAGGTTTTGCAAAGGAAGCGATTAAGAAGAAGAGCTACCTTGCTGTTGCGGTTTCTGGGG AAGAGGGATTGCAGTTGTTATTGCTTCATGCTATTGAGGAATTTTCTTCCAAGTCTACTTCCAATGCATTGAAGGAGGTTGCACTGCTTCTGAAAACTCT CTATGATGCTGATGTGTTGGAGGAAGAACCCATAGTGCACTGGTATTCAAAAGGACTGAAGGGTGATGAAAAGGGCTCTCAACTTTGGAAGAATGTTAAA CCTTTCATTGATTGGCTTCAGAGTGCTGAATCAGAATCAGAAGAAGAGTAATGTGTGCTCAGTGCTGAATTTGGAGGAGGATTAATATGTTCACTGTTGT TTCTGTTTGTTTACTTTTATTGTGTCACTTCAATTTGTTTTACTATGATTGTGTCCCCTTTTATTTAGAATAAAGGGTCTTGTTGGCCCCATGTGTTGCT GAACTATTACTCTGAAGTCTGAACTTTGAGTTTTTTGATAAGGGTGTATGTCATTGTAGTATTGCTCTACTATATTATTGTCCTTGCTTATGATTGTGTT TTTACAAACATTTTCTGGTATAATTTCATTTTATGTTGTGTCTAATGGTTGTATTTTCAATCTGTGCCTCGCCTTCTATAACCATTACATAAAAAAATTA TGCTATTTTTGTTTGTCTATTGATTGTATTTTTAATGTGTG
• Tissue: pods
• Gene name: LI_gene_182942;
• Additional information: details;

Expression of Ll_transcript_462340

FPKM

• PAB: 12.2
• PNAB: 68
• PS1: 58.4
• PS2: 58.8
• PS3: 58.1
• PW1: 43.9
• PW2: 50.8
• PW3: 49.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_462340

• Blastp: Eukaryotic translation initiation factor 5 from Phaseolus with 81.76% of identity
• Blastx: Eukaryotic translation initiation factor 5 from Phaseolus with 81.46% of identity
• Eggnog: -
• Kegg: -
• CantataDB: Link to cantataDB annotations (CNT0001731)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419238.1)
• Pfam: Domain found in IF2B/IF5 (PF01873.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;