Ll_transcript_461759

• Id Trinity: TRINITY_DN51175_c4_g1_i6
• Name Transcript: Ll_transcript_461759
• Sequence: TATTAATTGGTGTTTGAATCGATATTAATCAAGAATTTAATGTGAGACTAGAGATTTTATCTTGTTTCTCTCATGGTAGCTATATTACTCATCTTTGTAA TATGGAAATGCTTAATGTATATATTCGATAAATGGTTTTCCATAAGTTATTCATGATATAGGGCTTGTAGAGAAGCCAATATTGAAATATATTTTTTTAA TATCAGAAGCATTAACCAAAGTGATTGCATTGTGGGTCCTTCCACTTGTTTGGTTGGAATGAACAATGGTACATGTAAATCTCAAAATCAAGCATTTAAG GGAAATAATTGCTTCTTAACCAGTGGAGCAGGAGATAAGGATAAAGTGACTATTACATTTTTGTGGATGTTGCCCATTTAACATTTTTTGGTTTCTTCCT GATGGAAATGGAACTAAGGTTCAGTCGAAATAACTGCAGAGAGTTTCGATTGCAATCATCTACAACTTCTTCGAATGGAATTGAGTTTTGTGCTGTCTGT CTCGAGACGCCTTGTTCAGTGGCTGCAGAAGGATGTGGGCATGAGCTTTGTGTAAGCTGTGCTCTCCATCTTTGTTCAACAAGCAATGGTTCTCGTGACA TCGTTAGCCCTCCTGGTTCTATCCCTTGCCCCCTTTGTAGGCACGGGATTGTGTCGTTTGTCAAGTTACCAGGTTCTCAAGCAAAAGAAAATAAACAGAA TGTGTCTCTCCGCCTGTGTACACCATGCATGCTACATCCACGTGATGTACATCGACCAGCCCTTTCTCATGCATCAGAGATTAGGAGAAATCGTGTAGCT TCTGTTTCTTCAGAGACGATCTGTTCCATCACTTGTACTCCATTTCCATCTATGGCAATTCCTCTATGTACTTGCAACGGTGGTTCTTGTCCATCATTTC AATCCCGTGAAGTAGAAACTGGAGATGAACCTTCTCATAGCTCACAAGCGTCAGCATTGGATCAGAATAAAACGGAGGGGCCAAGAGTAGAAAAAACATC ATGTACAAACATGTTTCGGGCTAGAAGAAGTTGCAGCAGAGAGCATCGTTGCGATTCAGAAATAAATACTGGAACTCAGTAGGTAAGAATATGCATAGTA ATATAAAATTTTAGATCAAAATAGAACTGCACAGCTATCTCATAACCAGCTTCCAATAGTTAAAGCTAGTGGATATATCAAAGAAAAAAGATGCTTCCAA CATTTGTTTTGCGAGTGTAATATCTATGTGCCGTAAGTGTAAAGATTTATACACAGTCAATAAATCATTCACCATTCATTTGTATTAATTTTTTGAAGAG TCAATGATGATTAAATATGAACGGCGAATGATACAGTAACAGTGTATAAAACTCATACGCTGTCAGTGCATACATTTTCTCTCGTTTTGCTACAATGGTT GCATAGTAGATGGTAAATAATATTCTTGCATTTTAGCATCCCCATCACCTTTTTAGTTCTCATTTATAATATTTTATAGAGGGTTTGTAAAAATTCATAT GATCCAATTGTTATTCTAATTGGGTGTCATTTTATGAGAAAAAGAAGTATTTCTCAAGAGGAAGAATAGAAAAAATAATACCCTTATGGTTTAGCTTAGT TAAATATCAAATTAGGGGGTTTGTATTTAATGCTTGTTAGAAATTGTATACTTTTACAAAGAACAAAATTGAGTATGAAAAAGGGGTATTGTTGATGCAT TTGAATATGACCATGTTGTGTGATTGATGGTGTTTCTTCCTTCACTCTGGCTCTTGCATTTTACACTAAATCACTACATATTCAATTTTAAGGAAAAGAA AAGGTAGAAAATAAATATGGGAAGTATGTTTCACTTTTTTGTTTTCCTGAAAAAGGAAAATGTAGGAGTTGGGCAAAGAATGGAAGTTTTGTAAATTTTG CGGGTTTATATTTGGTGACCTATAAATAACAGTGACTTTGTGCATTTAATGAATG
• Tissue: pods
• Gene name: LI_gene_182957;
• Additional information: details;

Expression of Ll_transcript_461759

FPKM

• PAB: 0.1
• PNAB: 0.2
• PS1: 0.2
• PS2: 0.3
• PS3: 0.3
• PW1: 0
• PW2: 0.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_461759

• Blastp: Probable E3 ubiquitin-protein ligase XBOS33 from Oryza sativa with 48.6% of identity
• Blastx: Probable E3 ubiquitin-protein ligase XBOS33 from Oryza sativa with 48.6% of identity
• Eggnog: Ankyrin Repeat(COG0666)
• Kegg: Link to kegg annotations (9266159)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464952.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;