Ll_transcript_461821

• Id Trinity: TRINITY_DN51176_c4_g1_i1
• Name Transcript: Ll_transcript_461821
• Sequence: ACACAATCAAGATAGGCATAGATCTTCAGAAACACTCTCTCTCGTCACTCAGATTCCAAACTCTCCCAAACTACCTTTATCTCTCGCCGGAATATTCCTT TTCTCCACCGGAAAATGGGTTTGCGCTAAAAATACTGATCGTTAAAAAATGGGCGAGGAAGACTTCACCGGAGAATCTAAACCATTTCAAAGCTTGCCAG AACAACCCCCCGGAATCTCCAACCTCCAGAAATCCATCGAGTTCATCTCCTCCTTGATCCCCCTCTCTCACTCCGTCCGTGTCTTCGCCGGAAAATGGCA ACACATTCGTAACAAACTGGAGGAGCTTTACTCCGGCCTCATCGCCGCCGAGAACTTCGATTCCGGCGAGAACCCATCACTCTCCGGCGTGGTCATTTCG ATATTGGCCACAACAAGTGAATGCTACGATCTCGCGAAACGGTGCGTCAATCTTTCTTACAGTGGGAAGCTTCTTATGCAGAGTGATTTGGATGTAGTTT TTGCAAAGTTCGATAACCATGTTAAGAAGCTATCTGAGATTTACAAGAAAGGTATTTGGTCAAATGGGTATGCACTTGTTGTGTCAAAACCGAGTCTTGC TGCTTCTAAGGAGGATATGAGGTTTTACATAAGGGATTTGTTGAGTAGAATGAAGATTGGTGATTTGGGTATGAAGAAGCAAGCTTTGATGAATCTTTAT GATGTTGTTGTTGAGGATGAGAAGTATGTTAAAGTGATTGTTGATGTTGGTGATGTTGTTCATGTTTTGGTGGGGTTTTTAGGTTCCAATGAGGTGGGAA TTCAAGAAGAGAGTTGTAAGGTTGTTTCGATTATTGCGAGTTTCGATTCATATAAAGGGGTTTTGGTTGCTGCTGGGGTTATTGCTCCTTTGGTGAGGGT TTTGGATTGTGGGAGTGAGGCAGGAAAGGTTGGTGCTGCGAGTTGTTTGATGAAATTGACTGAGAATTCGGATAATGCGTGGTGTATTTCGGCTCATGGA GGTGTCACTGCTTTGCTGAAGATTTGTGGTGAAGATTGTGAAGGGGATTTGGTTGGTTTTGCTTGTGGGGTGTTGAGGAATCTTGTTGGTGTCGAAGAGA TAAAGAGGTTTATGGTTGAGGAGAGTGTCGTGTCCACTTTTATTAGGCTTCTGAGGTCCAATGAGGAAGTAATTCTGGTGAACTCAATTGGGTTCATTCA AAGTATTACCTATGGTGATGAGCTGGTTCTGGAAATGGTAATTAGAGAAGGTGGAAGTCGTGCTTTGTTGAGTGTATTGGAACCTAAATTGAGTTATTCT TCTAAGACAAGGGAGATAGCAATGAGAGCTATTGAGAAATTGTGTTTTTCTTCATCCACTTGTGTAAGTATTTTGATGAGTTATGGTTTTGTTGATCAGC TGTTATATTATGTTAGAAATGGTGAAGTTTCAATGCAAGAGTTGGCTCTGAAAGTGGCTTCTAGATTGTGTGGAACATCAGAGGAGGCTAAGAAAGCAAT GGGTGATGCAGGCTTTATGGCTGACCTTGTTATGTTTCTAAACGCAAAATCATTTGAAGTTCGAGAAATGGCAGCCGAAACACTCTCTGGCATGGTTATG GTACCTAAAAATAGAAAGAAATTTGTGCAAGATGACCGTAGCATTGCCCTTCTTCTGCAATTGCTTGACCCAGAGGAGGGAAATTCAGGTAACAAAAGGT TCTTAATCTCTATCTTAATGTCATTAACAAATTGCACCAGTGGGAGGAAAAAGATTGTTAGTTCTAGTTATGCCAAAAACATAGAAAAACTTGCAGACGC TGAAGTTTCTTCTGATGCCAAGAGACTTGTAAAGAAGCTAACCGCAAACCGGTTCCGCAGTATGCTGAGTGGAATCTGGCACTCATGAATGTATTTTATT TTTTCCTTCATTTTTAACTGTATATTTTCGTAAGTATTACAAGTTTTGCTAATTTGCTTTCCCCTTCTTATTATGTTCTCTATCTTATTTCATTTCCCTT GCCAATGACAAGAGTAGCATAGGTTTATGTTGAGATTGGAACCACATGTAGTGACACCATAAAATCATTGTTGTAGATTTTCTTGAGGATACTCTACCAT TGTTGTTTGCCTTCAACTATGGTAGTTTGTACCAAAGAAGTAATGAATTGTAGTAGTATTATATGACAAAAAATTAATGTAATTACTGATTACAG
• Tissue: pods
• Gene name: LI_gene_182969;
• Additional information: details;

Expression of Ll_transcript_461821

FPKM

• PAB: 1.3
• PNAB: 16.2
• PS1: 10.4
• PS2: 5.4
• PS3: 4.8
• PW1: 4.3
• PW2: 4.4
• PW3: 2.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_461821

• Blastp: Vacuolar protein 8 from Nakaseomyces/Candida clade with 23.6% of identity
• Blastx: Vacuolar protein 8 from Nakaseomyces/Candida clade with 23.99% of identity
• Eggnog: U-box domain-containing protein(ENOG410XRTN)
• Kegg: Link to kegg annotations (CAGL0M03355g)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019424113.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;