Ll_transcript_462374

• Id Trinity: TRINITY_DN51185_c0_g1_i1
• Name Transcript: Ll_transcript_462374
• Sequence: CTCGAGTCCGCCCCTTTATGTTTGAATACAACATCGAAGACCGTTTTCACTATCTCACTCTTTCTCTCTCTAAATTCTTCTTCAGATTTTGCTTATTATT GATCTCAATTTGCGAAATCTTCCTTCGTAATCTTCGTTTTGGATCTCCAAACCGTTTCAACTGTGGTCTCCATTATCACTCGTCTTCGCATTCTGAATCT CTGTTTGATTCATGTGTTTATTCGCAGGAGTTAGCCGTTGGGGATTATAATGCTTCGGAGAGACACTTGCGGAGAGAATTGTAGTGGAATCAGAATTGGA GTGTGCTATCTTGACCATCTGCCAACAAACTATGGAAAGTGACAGGAAAGTCCCTGCTCAATCAGATGGTGTTGTTCAGAAGGGCAGGGCATTGCATGGG AGGACTACTGGCCCTACAAGGCGTTCTACAAAAGGACAATGGACACCTGAGGAGGATGAGATTTTGTGCCAGGCAGTACAGCGATTTAAAGGAAAGAATT GGAAAAAAATAGCCGAGTGTTTCAAGGATAGAACTGATGTACAATGTTTGCATCGGTGGCAGAAAGTCTTAAATCCAGAACTTGTCAAAGGTCCATGGTC TAAAGAGGAAGATGAAATAATTATTTCTTTGGTGAACAAATATGGTCCTAAAAAGTGGTCTAATATTGCACAACATTTACCTGGGCGTATCGGTAAGCAA TGTCGAGAAAGGTGGCATAATCATCTTAATCCTTCTATAAACAAGGAAGCGTGGACGCAAGACGAGGAGTTAGCTCTAATACTTGCTCATGAAAAATTTG GGAACAAATGGGCAGAACTAACAAAATATTTGCCTGGAAGGACAGACAATGCAATAAAAAACCACTGGAACAGTTCTGTGAAAAAGAAATTGGATTCTTA CAAGGCATCAGGCTTGCTTGCTCGATTACAATCTTCAAGGTTGCAATGTAGTGGAGATGAGAATGGTTCCAAGGGGATTGAAGGAGGGGAAGTTTCACAG TGTAGCCAGGAGTCAGCTAATGTCCGTCACTTTCCTTCTGCCACAGAAATGAGCAATGCTGCTTTTCAAACTAGAGAGAAAAACAAGCCAAATGAAGAAT CTAGTCTAGGAAAGGATTATAGTCCTAGTCAAGCATCCTCTTCAGAGCCTTATTACGTGTCTCTCGATGATGTTGAATTCATTGAGCAGAAACACACACA AGAACCTGGAAATTTCACAAATGGGGATTGTCAGCTTAATTTACATGCTCTAACCGATATTTCCACATTGGACTTTGTACGGGAATCCTCAAGGTTGCAA AATGATTGTATAGCTCCAAGTGAAAGCCGTGAAATGCTGATATCTAATGATGAATGTTGCCGATTGCTATTTTCAGAGGCACTGAGTGATGAATACTTTT CCTCTGGATATAATAAAGGTGTAAATATGGCTGACCTTTCTGGATGCACTTCGTTTAGCTGCCAGACATCTGCTGCTCCATCAGTATCTTCTTCTGGTGA TGATAGGTTGTTGTGTACTGCTGAAGCCAATCAGTTAGTTGGATCTGTGGATCAGCAGTTTGTATGCCCGGCATCTGCTCCACCAGTACCTTCTGCTAGT GATGGTAGGTTGCTGTATATTGCTGGAACCGATCAGTTAGTTGCATATGAGGATCAACAGTTTGTGTCCAGAGCAGAGGACAACATCCTTTATACCAATG ACTTATCCAGTTCTCGAGGTATCAATGAGATAGATTGTGCAGAAATGCAAAAGCGAACAGATAATGTTGAGGATACCTCAAAATTGGCCCTTGTAAATAG TATTGGCTGTGGTTCAAATACTAAACAAACTTGCTATCCAACAGATGAAAAGCCAAATGTGCATACAGAACAGGAGAACACAGGATCTCTCTGTTACAAA CCTCCCTGTTTTCCAAGCTTGGATATTCCTTTCTTAAGCTGTGATCTTATACAACCTGGGGGTGACATGCAACAAGAGTTTAGTCCCCTAGGTATCCGCC AGTTGATGATGTCTTCTATGAACTGTCTATCTCCTTTTAGGTTGTGGGACACACCTTCTCGAAGTGATAGTCCAGATGCTTTGTTGAAAAGTGCTGCTAA AACTTTTATAGGTAGACCATCCATATTAAAGAAAAGACACCGAGGCCTCATATCTCCGCTATCGGATAAAAGAATTGAGAAGAAACTTGACTTTGACATG GCATCAACATTGATAAAAGATTTTTCCTGTTTGGAAGTCATGTCTGATAACATTGAGACTCAGGAAGCAGTTTTGCTTTCTCCATCTTCAATGGAAAAAA AGAACTCTGGTACCTCTGTTGAAGATGATAAAGAAAATTGTGGACAAGCTGTTAAAGAGGAACAAGTATTGGAGAAAAATGATTCTGCAATTTCGAATGA CAAAAAGTCAGAACTAGATGCAGGTGATAGTAATTCTCAAGAGAAGAGTACACAGCTAGTTTCTGAACTTAAGTGTGAGATGAAAAATGATGTCAATGCG ACTGCTGAGATTGTGCATCAACCTTCTGGAGTTCTGGTTAAGCATGATAGGAATAACCTGTTACTGCACTCTCCTGATCTAGTTGGTTTTAAATCAGACA GCGATCAAAGTTTATGTGCTAGAGCTCATAAAAGTCCATGCTCGGGTGTGAAGTCTCCTTATGGACAGGAAAAACTTAGAGTTGCTGTTGCTAGTTGTGT ACAATCTTTCTGTTCATCAGCCCAGGGGGAGAATTCAGATATTCATGCTGGAAAAGATGGTGGTTTTGAAACGTGTAGCATATTTGGTGGAACACCTTTT ATGAGAAGTATCGAGTCACCAACAACATGGAAATCACCTTGGCTCTTCAATACTTTTCTGTCTAGCCCCAAGATTGATACTGAAATTACTATTGAGGACT TTGGGTATTTCATGAGCCCAGGTAATAGGAGCTATGATGCAATCGAGTGGATGAAACAGATCAGCCCAATTGCTCGTGAAATTTTGGAAAATGAAACTCC TAAGGCACCACCAAAAAATGAATCTGGAAATCACCGTGATGGGGACCAAGAAAATAAGGATCCCCGTGATGAGCCTGGGAACCGTTGTCAGTTGGCTTCA AATGCTATCTTAAAGGTGGAACGACGTATACTTGACTTCAGCGAATGTGGAACACCAGGCAAGGTTGATAGCAGCAAATGCTCAACTATAAGCTGTTGAA GCCCTTCATATTTGTTGAAAGGGTGTAGATAACTGCTTTTCAAATTATTAGAGCAGATGTTGCATCTATGATGATCCAAATATGGAACTCCTATCTAATG AAAGCTGCTTGTTGTTAGAACTGAGTTTGTCATTCGGAGGTAAATCTCGTGCGAGATAATGATTTCAAAGACGCATATCCGGACCTATCTCCATTGTCCG GCTGGTCTCAAGGGATTGGATCCAGTCCCATTTGCTCTCCATGTTTATGTAAATTTTATATAATATGCCATATTTAAGTTTGTTTTTTGGTTTATCTCCT ACAGTGGTTAAACTTAAATATATAATTGTCATGAAAACATTCTGCTTCTATATATAGTAAGTAAACTGCAATGACATGAAAGGATGTGAACTTTTCTTGT ATTAGTTAGGCCACAACACTCTTTGATTAAGTTCTCTTGCTTAGCATGCACTATAGTAGAATATTGCAGCAGATTAGAGGCTCTTCAATATGATCTTCCA TCATCAAGTTGTTTCTGTGGATCGGATGTCGCAATCACATTCACGTGGAGAATTACGGCTATCCCAGCTTTCTATGTTTGTGATGGATGCTAGCGAAAAA ATGCAAAAAATGTCCCAATTTTTAGAAGTCCATTTGTTTAGTTTTGTCCCTTTCTCCGACCCTATCCCGGAGTAGGATGAGAAGAGACCTAGTCTCTCAA CTCAGTGCCTTTCTCATCTCTTCAGCCCTTTGTACTTTGCTTCTTCTATCGATTTTCTAGCTATTTTCTGGCAACCATGTCCCTAATGTTGTGTATTGGC TATTGCTATCTCTTCCCAGTTCTTTATTATCTTGAAAAAAAA
• Tissue: pods
• Gene name: LI_gene_183028;
• Additional information: details;

Expression of Ll_transcript_462374

FPKM

• PAB: 0.1
• PNAB: 6.6
• PS1: 7.2
• PS2: 2.6
• PS3: 6
• PW1: 3.5
• PW2: 1.3
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_462374

• Blastp: Transcription factor MYB3R-4 from Arabidopsis with 36.92% of identity
• Blastx: Transcription factor MYB3R-4 from Arabidopsis with 36.76% of identity
• Eggnog: Myblike DNAbinding domain containing protein(COG5147)
• Kegg: Link to kegg annotations (AT5G11510)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019438403.1)
• Pfam: Myb-like DNA-binding domain (PF00249.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;