Ll_transcript_462385

• Id Trinity: TRINITY_DN51185_c0_g1_i12
• Name Transcript: Ll_transcript_462385
• Sequence: ATTTTATTTGAAAAGAGAACAAAGAAACCAAACTCCAACGTCTCTCTCTCTCTCCTCTTTGCAGATTCTTTCCCCATTCGGATCTGCAATATTAGTATTT GGGGTTTCATATCTGAACTAAAGTTACTGTCTTTGAACCCAAACGAGGAGTTTGTTGCTGTGGTTCCTTAAAGGGACTATAATGATTTCGGGTGGAAACC TTGGAGAGAGTTGCAGTCGAGTCGGAGTTCGGACAATTACTTGTCTGCGAAAAAGCTATGGATGGTGATCGGAAAACCCCCGATCCATCTGATTATCCTA TAGATGGTGCTCAGAAAGTTAGATCATTGCACGGGAGGACTAGTGGCCCTACAAGGCGTTCTACAAAGGGGCAATGGACGTCCGAGGAGGATGACATCTT GAGGAAGGCTGTTCAGCGATTTAAAGGAAAGAATTGGAAAAAAATAGCTGAGTGTTTCAATAATAGAACTGATGTACAATGCCTACATAGGTGGCAGAAA GTTTTAAATCCTGAGCTTATCAAAGGTCCATGGTCTAAAGAGGAAGATGAGGTGATTATTGAACTGGTGAACAAATATGGCCCTAAAAAATGGTCTACTA TTGCACAACATTTACCTGGACGTATTGGTAAACAATGTCGAGAAAGGTGGCATAATCATCTTAATCCGGCTATAAACAAGGAAGCATGGACACAGGAAGA GGAGTTAGCTCTAATACATGCTCATCAGATTTATGGGAACAAATGGGCGGAATTAACGAAGTTCTTGCCTGGAAGGACCGACAATGCTATTAAAAATCAC TGGCACAGTTCTGTAAAAAAGAAATTGGATTCTTACTTGGCGTCGGGCTTGCTTAATCAATTCCAATCTGTACCTCATGTGGGAAATTCAAATCAATCGA TGGTTATAGGCTCTTCGAGCTTGCAGTGTGGAGATGGTAATGATTCAAAGCAGACAGAAGGAGAAGAAGTTTCGGAGTGTAGCGAGTCAGCTAATGGTGG TCATTTTCCATCAGCAAGAGAGATGAGCAATGCTGGCTTACAAACTAGAGAGGACTACAGAGCAAATGAAGATTCTAGTCATGGAAAGGATCATAGTGCA TATCAAGCATGCTGTTCAGAGCCATATTATGTGTCTCTTGATGATGTTACTATATGCGACCCAGACATTACTCGCCAAGACGCTCACGCTTCTCAATTTA TTGAACATAAATTCTCACATGAATCTGGAATTTCTATTAGCAGGGATGGTCAATTTAATTTTCATTCCTTCCCCAATATTTCATCAGAGGGCTTGGCGCA GAAATCCTCAAAATTGCAAAGCAACTGTGTAGCTCCTAGTGAAATCTGCGACTATGTTCCGTTTCAAACTTCAGGGAGGTTAGCTGTTTCTACATCCACG GGACCTACTTCTACACATTCTGTTAGACCAGAGCCCATGTTGATATCTGATGATGAATGTGGCAGAGTCCTTTTCTCAGAGGCAGGGAACGACACAGGCT TTTGCTCCGGAGATAATAATGGTGTAGATTTTGTCGACTTTTCTGGATATACTTCATTTCTTTCCCAGTCGTGTGATATCCATATGTCTGAAACCGGTGG AACTTCAACTTCACAGCAAAGTTGTCCTCCCTGTTCTAATACTTTTAATACTTCATCCTCTCAATCTGTGCCACCAGTACTTTCTTCTAGTGGCCGCTGT CTGGTTTTTACTGCCAATGATAATCAATTATTTGAGCCGGAGGATCAGCAGATTGTTTCTGGTGCACCTGATAATTTTGTTTATGCCAATGACATGTCCA GTTCTCCCCGTGTTGATGGTATAGATAGTGCAGTAATGCAAAAGGCACCAGATATTGTGAAGGATACTTCAAAGCTGGTCCCTGTAGATAGGTTTGGCTG CGCATCAGGATCTATGCAAACTTGTTATCCGACAGATGAAAAGCCAACCACACATATAAACAAGGAGGGTGGGGGAGCTCTATGTTATGAGCCTCCTCGT TTTCCAAGCTTGGATATTCCTTTCTTCAGCTGTGATCTTGTACAATCTGGGGCTGATATGCTGCAAGAATTTAGTCCCCTTGGTATCCGCCAGTTTATGA TGTCATCAATGAACTGTCTGACACCTTTCAGGTTGTGGAGCTCACCCTCTCGGGATGATAATCCAGATGCATTGTTGAGAAGTGCAGCCAAAACTTTCAC GGGCACCCCATCCATACTAAAGAAACGTCGCCATTGCCTGTTGTCACCACTGTCAAATAAAAGAATTGGCAAGAAACTTGACGCTGACATGGCAGCCACA CAGACCAAAAATTTTCCCAGCTTGGAAGGCATCTTTAATGGTAATGAGATTTCGGAAGTAGATATGCTTTCTCCAACTGTAATGGAAAAAAGGAACTCTA ATCTGGCAGTTGATGTTGATAAAGAAAATTGTGGACCAGCCTTCAAAGGGGAACAAGTGGATGAGAAATTGAAATCTGCAATTTTGGACAAAATGAATTC AGAAAAAGTTACCATTGACAGTAACTCTGAGGATAAAATTAAGCAGCGGCCTCTTGATATTGATGCTAAAATGAAGACCGTTGTTGATGCTGCTGCTGAT ATTGTGCGACAACCTTCCGGAGTTTTGGTTGAACATGATATAAATGACCGGTTGCTGTTCTCTCCTAATCAAGTTGGTTATAAGTCAGACAATGTTCTGG GTTCAAGTGCTAGAACTCCCAAGAAGTTGGACGATGAGAGTTTGGAAGAAGCTTCAAATCAGAGCATCCCTTTGAAATTAGCATCTGAAAAACCATGCCC AAATGTTAACTCTCCTTTTGTTCATGCAAAGGAGCATGAAAGACTTTCAGTTGCTGTTACTTGTGTACAATCCGTCTGTTCATCAACCCCAGGGGAGAAC TCACGGTATCAAACCAGAATCGATGGTGCTTTTGAAACTAGTAACATATTTGCTTCAACACCTTTCCGGAAAAGCCTTGAGTCACCTTCTGCATGGAAAT CTCCCTGGCCCTTCAACACTCTTCTGTCCAGCCCCAGATTTGATACCGAACTTACAATTGAGGATTTTGGGTTTTTAATGAGCCCGGGTGGTAGAAGCTA TGATGCAATCGGATTGATGAAACAAGTCGACGAACAAACTGCTGCCACATATGCCAATGCTCAGGAGATTTTGAGAGATGAAACTCCTAAGGTGTTGAAG AAAGAGACATTTGGAAACAAGGATGGGGACGAGGAAAACAATGATATATGCAAACAGGCCGGGAAAGTTTCTCAATTGGGTTCAAATTCTTTGATGGAGC GACGAATACTCGACTTTAGTGACTGTGGAACACCAGGCAAGGGGGGTGATAACAGCAAATCCTCCTCAGCTATGAACTTCTCAAGTCCTACTTCATACTT GCTGAAAGGTTGCAGATAGCTGATTGCCAATTATAGCTAAAATCTCCAGATTTTTGGACTCTGAATTTCATGTTTTAATATAAATACTATAAATACACAT ATGCATAGTATATGCCATTTTTCAGATTTTTTGTTTTGACTTCTACAGTGACAAGACTTGTTGTAATTGGAATTAAAAATGTTATTTAACATTTTTTATA TAAATTAATAATCAAACAACTCTTCATATTGTGTCTCTTTTTATTTG
• Tissue: pods
• Gene name: LI_gene_183028;
• Additional information: details;

Expression of Ll_transcript_462385

FPKM

• PAB: 3.9
• PNAB: 15
• PS1: 12
• PS2: 12.3
• PS3: 15.5
• PW1: 11.7
• PW2: 5.1
• PW3: 6.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_462385

• Blastp: Transcription factor MYB3R-4 from Arabidopsis with 39.27% of identity
• Blastx: Transcription factor MYB3R-4 from Arabidopsis with 38.93% of identity
• Eggnog: Myblike DNAbinding domain containing protein(COG5147)
• Kegg: Link to kegg annotations (AT5G11510)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447482.1)
• Pfam: Myb-like DNA-binding domain (PF00249.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;