Ll_transcript_460967

• Id Trinity: TRINITY_DN51187_c0_g1_i13
• Name Transcript: Ll_transcript_460967
• Sequence: GCCAAAATTCCTTTCCTAATGTAAAAGAAAAGAAAATTCCAGAAACTGAGTCACACCTCACATCACAATACAAATAAAAAATCAACAACTAACTCTCTCT TCATAAACTTTCCTCACTTTCTCTCTCCTCTTCCATTCATTCCCCATCACACACACAAAATCTAGAGAGAGAAAGCGAGAAAATCAAGCTCTGAGAATCG AAAATGGCTACTCTTCAGTCATGGAGAAAAGCCTATGGCGCTCTCAAAGACACTACCAAAGTTGGTCTTGCTCATGTCAACAGCGATTACGCAGATTTGG ATGTTGCTATAGTCAAAGCTACGAATCATGTTGAGTGTCCTCCAAAAGAGAGACACCTTAGAAAAATTCATTTTGCCACGACTGCTATACGACCGAGAGC TGATGTTGTTTATTGCATTCATTCCCTTGCTCGTCGATTGGCCAAGACGCGAAATTGGACGGTTGCACTGAAAACACTAATAGTCATCCATAGGTTGCTG AGGGAGGGAGATCCTACTTTTAGAGAAGAGCTTCTTAATTTTTCTCAGAGGGGACGCATTCTCCAACTTGCTAATTTCAAGGATGATTCTAGTCCAATTG CTTGGGATTGTTCTGCCTGGGTACGTACTTATGCATCATTTTTGGAAGAAAGACTTGAATGTTTCCGGGTTCTGAAGTATGATATAGAAGCTGAGCGTCT ACCCAAGCCTGCCCCAGGACAGGAAAAGGGGCACAGCAGGACCAGGGATTTGGATACTGAGGAGCTATTGGAGCAGTTGCCTGCTTTGCAACAGCTGCTT TATCGTCTTGTTGGTTGTCGGCCGGAAGGAGCAGCTTTTAGAAACCATGTGATACAATATGCCCTAGCTCTGGTACTAAAAGAAAGCTTTAAGATCTATT GCACTATTAATGATGGCATTATCAATCTTGTTGATAAGTTTTTTGAGATGTCCAGACATGAGGCTATTACAGCCCTTGATGTCTATAAACGTGCGGGTCA GCAGGTGGCTATTTGCATTAGTATTTCATGTAACATTTTGGGACTTGTATTTTTATGCTGTAAACTGGAAGCCTTTTGCAATTTATATTTAGGATGCCTG TGTTGAATCCATGTAAATTGTTGCAGGCGGCAAGTCTCTCTGATTTCTATGAAATCTGCAAAGGGTTGGAGCTTGCTAGGAATTTTCAGTTTCCTGTCTT AAGAGAGCCTCCACAATCTTTTCTTACAACCATGGAGGACTACATAAGGGAAGCACCAAGAGTTGTTATGGTTCCAACTGAGCCATTGCTGCAATTGACT TATAGACCAGAAGATGATGTTCTCACAATTGAAGACACTAAATCATCTGTTGAAGAACAGGAGCCATCGGTGCCTGTTGATGATGTTGTTGTCTCTAACT CTGAGCCTGCTCCTCCTCCTCCTCCACCACCTCCTCACAACAATTTTGAAACTGGAGACTTACTGGTAAGACTTTGCTTCAAGGTTCATTATCACAGGTT ATGCTTTAATATGACTTTCTTTATCTCTGTCCTCTGTGCAGGGGTTGAATGACATTACTCCTGATGCTTCATCTATAGAAGAAAGAAATGCTCTCGCCTT AGCTATTGTCCCCTCCGAAACTGGAACAACACCAATTGCTGCTCAAGCAACAGATTTTGATCCATCCGGATGGGAGCTTGCTCTGGTGACCACAAGTACC AATATTTCTTCAGCCAATGAGAGACAATTGGTAGGTCCTTCATGTGAACTTTCTAGTATAAATTAACATCTGTGTTAAAGTCAAAGTTACGTGATTGAGA ATCATTTATGAAATCCTGTTGGATTAAAAGCTGACATCATCTAGACCACTTTTAGGATCTAATTTGAAAGTGGACTTGAGTCACCATCGCGAGGCTTATA TGGACTTGAGCTCTCCTCGAAAAGAGCTACCTTTTTTGTTATGGTTCTCCTAAATTTTGATACAATTGGTATCAAACCCTCTCACCATGCCTTTCATTTG CCAAAGAGTGGCACAGAGGGTGATGTCGGCATTTTGTCGTTTTCGGCTGGAACTAGTCAAAGGACTAGTGCATGTTTAGCCCATGTGGGTTTGGCTGCAC ATGAGTGGATCGTGATGGAAAGTTAGTAACAAGTTTCCAATTGGTGTGTGGGTGGAGGGTGTTATGGACTTGGGCTCTCCCACCATAATGGCTTGTGGTG TGGTTATCCCAACGTTTGTACCATCCACACTACGGAGATATTATGTTATTAAGATATTACTTTATACTAGAATTTTCACACGATATTTATGTTCCTACTT GTTAATTTTATACGGGCCAGTGTTCAATTTATTTTAAAAATTTAGCTTGCATGATTGACCATACAGTTGGATCAAAGAAAACCAAATCTGCAACTACAAT AATTATTTGTTGGTTGTTGTGTTAGAAGTATTATCCGTGTCAATATATACTGTGAACATTCACGATGTTTAGGATTTGGAGAGAAATGTACTGTTCTAAA AGACATCAATATGCATACATTCATGAATCAGGGAGATCATTTCATTAATCTATGGTTGACTTCACTAATAATTTGCTGGAAATTCTTGTTTGTGTAACAT GTTTGGATATCAACACACCTCAGATTGGTTAATAAATGTTGAAAATAACATTTATCATTTTTGTCTCATTGAATATCAGGCTGGTGGATTGGATTCTCTT ACCCTTAACAGCTTATATGATGAAGGAGCATATAGATCTGCACAGCAACCAGTATATGGAGCACCAGCCCCAAATCCATTTGGTGTGCAAGATCCTTTTG CTTTTTCAAGCAGCACCCAAATGGCAGTGATGCCTCAACATCAAGTCAATCCGTTCGGTTCGTACCAACCTTATCAGGTACAGCAGCCACATATGATGAT GAACCCAGAAAATCCTTTTGGGGATGCAGGGTATGGAGCATTTCCTGTGAATTCAGTTTCTCACCCACAGCATAACACTCCATTTGGAAGCACTGGCTTA TTATAAGAACACTATTTTGTTATAAGAACAATGTTTTGGAGATGCTATGTATTTAATCAATCAAGTTGGTTTTGGTTGCTAGTTAGATGGTTTTTTCGAA TGAAATGATTGTAAAATTTAGATTACATATTTGTCAGAGTGATGGGTTTTCTCGATGTGTACAATGTTTATATACTTTGGAATTAAGTTATATATTTAAT ATGCTATACGCGATAGATGAAAATGTGTGATTAGTATTAATGTTGGACGCCTTAGATATGTT
• Tissue: pods
• Gene name: LI_gene_183041;
• Additional information: details;

Expression of Ll_transcript_460967

FPKM

• PAB: 1.1
• PNAB: 0.4
• PS1: 0.2
• PS2: 0.5
• PS3: 0.5
• PW1: 0.4
• PW2: 0.3
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_460967

• Blastp: Putative clathrin assembly protein At2g01600 from Arabidopsis with 80% of identity
• Blastx: Putative clathrin assembly protein At2g01600 from Arabidopsis with 86.57% of identity
• Eggnog: Clathrin assembly protein(ENOG410XQ90)
• Kegg: Link to kegg annotations (AT2G01600)
• CantataDB: Link to cantataDB annotations (CNT0000240)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437441.1)
• Pfam: ANTH domain (PF07651.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;