Ll_transcript_460951

• Id Trinity: TRINITY_DN51187_c0_g1_i4
• Name Transcript: Ll_transcript_460951
• Sequence: GCCAAAATTCCTTTCCTAATGTAAAAGAAAAGAAAATTCCAGAAACTGAGTCACACCTCACATCACAATACAAATAAAAAATCAACAACTAACTCTCTCT TCATAAACTTTCCTCACTTTCTCTCTCCTCTTCCATTCATTCCCCATCACACACACAAAATCTAGAGAGAGAAAGCGAGAAAATCAAGCTCTGAGAATCG AAAATGGCTACTCTTCAGTCATGGAGAAAAGCCTATGGCGCTCTCAAAGACACTACCAAAGTTGGTCTTGCTCATGTCAACAGCGATTACGCAGATTTGG ATGTTGCTATAGTCAAAGCTACGAATCATGTTGAGTGTCCTCCAAAAGAGAGACACCTTAGAAAAATTCATTTTGCCACGACTGCTATACGACCGAGAGC TGATGTTGTTTATTGCATTCATTCCCTTGCTCGTCGATTGGCCAAGACGCGAAATTGGACGGTTGCACTGAAAACACTAATAGTCATCCATAGGTTGCTG AGGGAGGGAGATCCTACTTTTAGAGAAGAGCTTCTTAATTTTTCTCAGAGGGGACGCATTCTCCAACTTGCTAATTTCAAGGATGATTCTAGTCCAATTG CTTGGGATTGTTCTGCCTGGGTACGTACTTATGCATCATTTTTGGAAGAAAGACTTGAATGTTTCCGGGTTCTGAAGTATGATATAGAAGCTGAGCGTCT ACCCAAGCCTGCCCCAGGACAGGAAAAGGGGCACAGCAGGACCAGGGATTTGGATACTGAGGAGCTATTGGAGCAGTTGCCTGCTTTGCAACAGCTGCTT TATCGTCTTGTTGGTTGTCGGCCGGAAGGAGCAGCTTTTAGAAACCATGTGATACAATATGCCCTAGCTCTGGTACTAAAAGAAAGCTTTAAGATCTATT GCACTATTAATGATGGCATTATCAATCTTGTTGATAAGTTTTTTGAGATGTCCAGACATGAGGCTATTACAGCCCTTGATGTCTATAAACGTGCGGGTCA GCAGGCGGCAAGTCTCTCTGATTTCTATGAAATCTGCAAAGGGTTGGAGCTTGCTAGGAATTTTCAGTTTCCTGTCTTAAGAGAGCCTCCACAATCTTTT CTTACAACCATGGAGGACTACATAAGGGAAGCACCAAGAGTTGTTATGGTTCCAACTGAGCCATTGCTGCAATTGACTTATAGACCAGAAGATGATGTTC TCACAATTGAAGACACTAAATCATCTGTTGAAGAACAGGAGCCATCGGTGCCTGTTGATGATGTTGTTGTCTCTAACTCTGAGCCTGCTCCTCCTCCTCC TCCACCACCTCCTCACAACAATTTTGAAACTGGAGACTTACTGGGGTTGAATGACATTACTCCTGATGCTTCATCTATAGAAGAAAGAAATGCTCTCGCC TTAGCTATTGTCCCCTCCGAAACTGGAACAACACCAATTGCTGCTCAAGCAACAGATTTTGATCCATCCGGATGGGAGCTTGCTCTGGTGACCACAAGTA CCAATATTTCTTCAGCCAATGAGAGACAATTGGCTGGTGGATTGGATTCTCTTACCCTTAACAGCTTATATGATGAAGGAGCATATAGATCTGCACAGCA ACCAGTATATGGAGCACCAGCCCCAAATCCATTTGGTGTGCAAGATCCTTTTGCTTTTTCAAGCAGCACCCAAATGGCAGTGATGCCTCAACATCAAGTC AATCCGTTCGGTTCGTACCAACCTTATCAGGTACAGCAGCCACATATGATGATGAACCCAGAAAATCCTTTTGGGGATGCAGGGTATGGAGCATTTCCTG TGAATTCAGTTTCTCACCCACAGCATAACACTCCATTTGGAAGCACTGGCTTATTATAAGAACACTATTTTGTTATAAGAACAATGTTTTGGAGATGCTA TGTATTTAATCAATCAAGTTGGTTTTGGTTGCTAGTTAGATGGTTTTTTCGAATGAAATGATTGTAAAATTTAGATTACATATTTGTCAGAGTGATGGGT TTTCTCGATGTGTACAATGTTTATATACTTTGGAATTAAGTTATATATTTAATATGCTATACGCGATAGATGAAAATGTGTGATTAGTATTAATGTTGGA CGCCTTAGATATGTT
• Tissue: pods
• Gene name: LI_gene_183041;
• Additional information: details;

Expression of Ll_transcript_460951

FPKM

• PAB: 78.9
• PNAB: 38.1
• PS1: 50.2
• PS2: 45.5
• PS3: 52.2
• PW1: 55.9
• PW2: 76.4
• PW3: 70.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_460951

• Blastp: Putative clathrin assembly protein At2g01600 from Arabidopsis with 72.32% of identity
• Blastx: Putative clathrin assembly protein At2g01600 from Arabidopsis with 71.06% of identity
• Eggnog: Clathrin assembly protein(ENOG410XQ90)
• Kegg: Link to kegg annotations (AT2G01600)
• CantataDB: Link to cantataDB annotations (CNT0000240)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437441.1)
• Pfam: ANTH domain (PF07651.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;