Id Trinity | TRINITY_DN51187_c0_g2_i2 |
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Name Transcript | Ll_transcript_460959 |
Sequence | GCTCTAAAGAAGAGAGAAAGAAAAGACAAGAAGAAGTATGCAGAGGGTAATCATGCAGCTTTTGCCAAAGAAATGCAATCCCCACGTTTTCAAGCCATCC TCAGACTCACAAGTGGCCGCAAAAAGAGACAGAATGATATTAAAAGCTTTTCCCATGAACTCAACTCTAAAGGTGTTAGACCTTTTCCAATATGGAAACA CCGTGCTTTTGGCCACATGGAGGAAGTAAGGGCTGCGGTTAGAGCTAAGTTTGAAAAGTTAAAGGAAGAAGTGGATTCTGACTTGGGTTCCTTTGCTGGA GATTTGGTGGGTATTCTTGAAAAAATCTCAGGAACTCATCCTGAATGGAAAGAGAGTTTGGAGGATCTGTTGGTTGTTGCTCGACAATGTGCAAAGATGT CTCCTACTGAGTTTTGGATCAAATGTGAAACTATTGTTCAAAATCTTGATGACAAGCGTCAAGAGTTACCAGTTGGGATCCTCAAGCAAGCCCATACACG CCTCCTATTCATTCTCACTCGCTGCACTCGCTTAGTGCAATTCCAAAAGGAAAGTGGCTATGAACAAGATCATATTCTGGGCCTTCACCAACTCAGTGAT CTTGGAGTATATTCAGAGCAAAATTTCCATGCTGCTTCACAACAGACATTCAGTGTTCCACTACCTTCTGGACATGACCAGATGATGGCTGAGAAGCAGT CACAGAAGACACGTAGTAATGAGAAAGACAAATTGGTAGTAAAAAAAACTCAGGTTGATCAACTAGTAAGCGAGGCAAATGACAATGCGGTCAGTCCAGC AAAAAGTAATGAATCAACTCCAAGCAGTTACAGGATGTCTTCTTGGAGAAAGCTTCCATCTGCCGCTGAGAAAAAACGCAAAGATAAAGATACTGTAGAA TTCCCACCCAAAGGTGAACTGGATCAGTTGATAGTTAAAGATGGAAATGCTGAAAACTTGGACGACTCATCATGTCATCCCGAACATTCAGAACCATCAT CAAGAACACGAAAGGTTTCTTGGGGATTCTGGGGGGATCAACAGAATCTAACATATGAAGATTCAATGATCTGCAGAATTTGTGAGGTTGAAATACCAAT TGTACATGTAGAGGAGCATTCTCGAATATGCACAATTGCTGATAGATGTGATTTGAAAGGCTTAACTGTAAGTGATCGGCTTGAAAGAGTTTCTGATACT ATTGAAAGGATACTAGAATCCTGGACACCAAAAAGCACTGATGCTCCAGGAGAAAGTTTTGAGGGAGCCAGAGTGTCTACATCAAGTCTGCACGAAGAGT TGAATGAGTTATCTCTAGAAAGAAATAACTTGTCTTGGAGAGGCTCTGATGAAAATATTGAATCTACTCTTGATGCTGACAGTACTTTTGTTATGGATGA TCTTAACCTTTCATCTGAATGTGAAGCACGCAACTGCTTGAAACCTGATCATAGCACAAAGGTTTCTTCAGCTGGAAGCTTGACACCAAGATCACCATTA GTAACACCACGAACCAGTCAGATAGAAATGTTATTAAGTGGACGAAGAACACTGTCTGAACTTGAGAGTTATGACCAGATACACAAGCTGGTGGAAATTG CCCGTGCTGTGGCAAATGTGAACAACTGTGACTACAGTGCTTTGGAGTATATGCTTGATCGCTTAGAAGACCTGAAATATGCAATTCAAGACAGAAAAGT GGATGCACTTATTGTGGAGACTTTTGGACGACGCATAGAGAAACTTTTGCAGGAGAAATATGTATCTTTTTGTGGGCAGATAGAAGATGAAAAGGTAGAC TCATCAAATAGTGCAGCTGATGAAGAGAGTTCAGTGGAAGACGATACTGTCCGTAGCCTTCGTGCTAGCCCAATTAATCCTTGTTCTAAGGACCGAACCT CTATTGAAGACTTTGAAATAATAAAACCAATAAGCAGAGGCGCATTTGGAAGAGTTTTTCTTGCCCGAAAAAGAGCAACTGGTGATTTATTTGCAATAAA GGTTCTTAAAAAGGCTGATATGATCCGTAAGAATGCAGTCCAGAGTATTTTGGCTGAGCGAGACATCCTAATATCTGTTCAAAACCCTTTTGTGGTCCGT TTTTTCTACTCTTTCACATGTAGGGAAAATCTTTATCTGGTTATGGAGTATTTAAATGGTGGGGATCTGTATTCTCTGTTAAGAAATCTAGGTTGCCTAG ATGAAGATATGGCTCGCGTATATATTGCAGAAGTTGTTCTTGCATTGGAGTATTTGCACTCCTCAAATGTGATTCACAGAGACTTGAAGCCAGATAACTT GTTGATTGGTCAAGATGGTCACATCAAGTTGACAGATTTTGGGCTCTCTAAGGTTGGTCTTATCAATAGCACAGATGATTTATCAGCACCATCATTTTCC ACTAACGGGTTCCTAGGAGATGATGAACCAAAATCTCGACATTCTTCAAAATGGGAAGAACGTCGAAAGCACTCAGTAGTTGGCACCCCAGATTATTTGG CACCTGAGATACTCCTTGGCATGGGACATGGTTTGCAGTTTATCTGCTGCTGATTAAATAGTGCAACTGCAGATTGGTGGTCTGTGGGTGTTATACTTTA TGAGCTTCTTGTGGGCATTCCACCATTTAATGCAGAACATCCACAGCAAATTTTTGATAACATAATTAATAGAGACATACAATGGCCCAAGGTACCCGGG GAGATCAGCTTTGAAGCATATGATTTGATGAATAAATTGTTGATTGAAAGTCCAGTCCAGAGGTTGGGTGCAACAGGAGCTGTTGAGGTCAAACGCCATG CTTTCTTCAAGGATATCAATTGGGATACTCTAGCAAGGCAGAAGGCTATGTTCATACCATCAACTGAAGCTCTTGATACAAGTTATTTCATGAGCCGGTA CATTTGGAATCCAGAAGATGAACATCTTGCTGGGGGTAGTGATTTTGATAACATTACAGAAAGCACCAGCGGTTCAGGAAGTGATTTATTATTAGATGAA GATGGCGATGAATGTGGCAGTTTAGCTGATTTCAGTGCTCCAGCTCTTGAGGTCCAGTACTCATTTAGTAATTTCTCATTTAAGAACTTGTCTCAGCTGG CATCTATCAATTATGATCTGGTGATTAAGAACTCTAAAGACTCACCAGATAACTCCAACCCCAACCCGTCTGATACATGACATAGCTATGAGGTCTTTTT CATTTGATTAACCAAGGATAAGGTTCAAACGGGTGATTTCCAGAAGAAGATGGTGTAGGCAGTTTTAATACTTGGTCTCATTTTTCATGTTTGTTACCTT TCAGTTTAGAATGGCAATTTGTTTTTTCCCCTTTCTAGGATTGAGATGGCTAGAAGATTCTATCTTTGCTTACATTATTACATTTGGAAACTCTATTAGT CTAGGTCAGGAAGGTGCATATCTTTCTGTGAAGGTTCTAGGTAGATTTTAATTTTCACCACATGCATTTGTTCTTGTACATACCTACATATATTGCAGCG AGACAATGACACTGAACTCCACTTTTTTCTTTCGGGTTTCATGTGTTTTTTAGGCTACTCCTATATACATACATTCATCAATAAGAAATGAATGACAAAC ACCATTTTTC BLAST |
Tissue | pods |
Gene name | LI_gene_183042; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_460959
Blastp | Probable serine/threonine protein kinase IRE from Arabidopsis with 64.99% of identity |
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Blastx | Probable serine/threonine protein kinase IRE from Arabidopsis with 66.02% of identity |
Eggnog | microtubule associated serine threonine kinase(ENOG410XPWX) |
Kegg | Link to kegg annotations (AT5G62310) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019413851.1) |
Pfam | Protein kinase domain (PF00069.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |