Ll_transcript_460065

• Id Trinity: TRINITY_DN51190_c0_g2_i6
• Name Transcript: Ll_transcript_460065
• Sequence: ATTGAAGAAACCTAGTTTTTCCAATAAGTTCCAATAGCTACTTACTAAAACCCCTTCTTCAGCTTTTGGTGGAGGGAGAAGAGAAGAGAAACATGGCGAA CGAAGATCGGAGCAATTGGAGTGATCTTCTACACTCTTCCACGAAGCTTCTAGAACAAGCTGCTCCTTCCGCTCAGTTCCCTCCACTTCAGAGGAACTTA GATCAACTTGAAGCGTTGTCTAAGAAGCTCAAATCCAAGACCTTAAGGGCAGAGGCGCCTTCTCAATCTATTGCTGCTACAAGGCTCCTTGCCCGTGAGG GGATAAATGCAGAGCAGCTTGCAAGGGATCTGAAGTCATTTGAATTGAAGACCACATTTGAGGATGTTTTTCCTGTTGAGGCAACAAGTGTTGAAGAGTA TCTGCAGCAGGTTCATGAAATGGCAATGGTCTCTTCTGTCCAGGAAGCTCAGAAAGATAATCTCAGTAGTTTTAATGATTACATGATGAAAGTTTTTGAG GAGGATTGGCAAAAAGAAAAGCGTGATTTCCTTCAGAGTTTAAACCGAATTTCATCATTACCTAGGACAAACATGACTGTCACCAGCAGTGCTGGTACCC GCCCGGGCCAGATTGTGCCTACAGCTTCTAGTCCACAAGTCTCTTATGGTATGGAGGTTGTTCCTCTTACTAGTAGACCGATTATGGAGAAGAAGGCATC CGTCTATGCTGAAGTAGTGAAAAACCTGAATAAATCAAGGGAGTGTGGGTTACCATTCAAACCTGCGGCATCTTTCAAGGGCGCATATGAAAGTTTGGGC ATTGATGCTGGTGGTGGAAAATCAGTTACCATGCGGAAGATATGGCACCTTGTCCAGATGATGATGGATGGAGACTCAATTCAGCAACATGTTTCAAAAA GGATGTCGTTGACTATTGGTGCAAGACGCCACCTTGAGTTGGGACACGAGAAATACATCATGGACACCATACACAGTCATCCTGCACAAGCTGCTCTTGG AGGCAGTGTTGGGAATTTGCAAAGAGTCCATGCCTTCCTTCGGATTCGCTTGAGGGATTATGGATTACTGGATTTTGATGCTGGTGATGCTCGGCGGCAG CCTCCTGTTGATACCACATGGCAGCAGATCTATTTTTGCTTGAGGTCTGGGTATTATGATGAAGCAAGGAATGTTTCCCTATCTTCACGTGCTTCACATC AATTTTCTCCTTTGCTTACGGAGTGGATTAATACTGGGGGAGTGGTACCAGAAGAGATTGCATCTGCTGCATCAGAGGAATGTGAAAGAATGTTGAGAAC TGGTGATCGGGTTGGTCGAGCTGCATATGACAAGAAAAAGTTACTTCTGTATGCTATCATATCAGGTTCTCGAAGACATGTTGATCGCTTGCTTAGAGAT CAACCAACTCTCTTTAGTACAATAGAGGATTTCTTGTGGTTCCAATTGTCAGCTGTACGTGACTGCCCTAGTGGACCTTCATCTATTGTTCTAAGTGATG GTCTGGTTCCATACACTTTGGATGACTTGCAAATTTACCTCAATAAATTTGAGCCATCATACTATACAAAAAATGGAAAAGATCCTCTGGTATATCCCTA CATCTTGCTTTTAAGCATTCAACTGCTTCCAGCTGTATTATACATGTCTAAGGAAGCTGGAGATGAAGGATATAACGTTGATGCTGTCCACCTATCAATT GTGCTGGCTGATCATGGGTTCCTTTCTGAAGGTGCTGGTGCTGGGCATAAGTTAGGAGTGATGGATGCTTATGCAGAAGTGTCTACCATTATTAGGCAGT ATGGATCTATGTATTTGCGTCTTAGTGATCTCCAAATGGCATTAGAATATTATGCGCAAGCTGCTGCTGCAGTGGGTGGTGGGCAGTTGGCATGGACTGG TAGAGGTAATGTTGATCAGCAAAGGCAGAGAAATTTGATGCTGAAGCAACTTTTAACTGAACTGTTGTTAAGGGATGGAGGCATATATCTTTTACTTGGT GCAAGAGGTGCTGGGGAAGAAGGTGAATTGGGTCGTTTTGTGACTGATCCAAAAGCGAGGCAACAATTTTTAATTGAAGCTGCCTGCCAGTGTCAGGAGG CTGGGATGTATGATAAATCTATTGAAATTCAGAAGAGAGTGGGGTCCTTCTCCATGGCCTTGGATACCATCAATAAGTGCCTCTCTGAAGCTATTTGTGC CCTTTTCCGTGGCAGGTTAGATGGTGAAAGTCGAACCGCTGGCCTCATCCATTCCGGCAATGAGATTTTGGAGACGTACACGTATTACCCTGATGTCAGT CTTCAAGAGAGAGAGCATGTCTTTGAGCAGCAAAATGTGTTAAGACAACTTGAGTCGGTATTGTCAATTCACAAATTGGCAAGACTGGGGAACTATGTGG ATGCAATAAGGCAGGTCGCCAAACTTCAATTTCTTCCTCTAGATCCTCGAGGCCCTGACATTGCTAACGACGTGTTTGAAAATTTATCTCCTCATGTACA AGCGTGTATTCCAGATCTGTTGAAGGTTGCTCTCACTTGTCTGGACAATGTGACAGATTCTGATGGATCACTTCATGCTTTAAGGGCCAAGATTTCAAGT TTCATCGCAAACAATCTGAAGAGGAATTGGCCTCGTGATTTATATGAAAGAGTTGCTCAGAGGTTATGAAATTATAAATATAAGATGGGAATTGATGTAG CCTTTAAGTTGTTGAGGATAGTAGAATTTGGCTGGATGAAGGTTTTCAGTAGTGTAACAATTGTAAAGTAGTCTCAATGGCATATTTGCTGGAACTATGC TGAGGAGATAGATATATTATGAGTAACTAGAAAAAAGAAATACACTTATCAATTTTCTCATCCTTTTTTGTGTTCTTGGTAATATGCTTTTCACAGATTT ATTTAACAAGAACATTGCTGGTGGAACCTGCGTAGTTTTTTTCTTTTCTGATTGTGGTTCATTTATGTTCAATGCTTTGTAAACATTTTGCTTATGCTAT GAAACCAGGTTTCGATTAAAAACTGAGAAGTAAATGTGTATAATCCGGAAAGGAGTTAACTCCATTATCCTATGATAAAGGGGATAAAACATGAATAAGA CTAGAAAGTAACTATTGAA
• Tissue: pods
• Gene name: LI_gene_183064;
• Additional information: details;

Expression of Ll_transcript_460065

FPKM

• PAB: 4
• PNAB: 16.1
• PS1: 17.7
• PS2: 13.6
• PS3: 17.5
• PW1: 11.2
• PW2: 10.1
• PW3: 10.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_460065

• Blastp: Nuclear pore complex protein NUP93A from Arabidopsis with 73.72% of identity
• Blastx: Nuclear pore complex protein NUP93A from Arabidopsis with 73.72% of identity
• Eggnog: nuclear pore complex protein(ENOG410XPN3)
• Kegg: Link to kegg annotations (AT2G41620)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448099.1)
• Pfam: Nup93/Nic96 (PF04097.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;