| Id Trinity | TRINITY_DN51190_c0_g2_i7 |
|---|---|
| Name Transcript | Ll_transcript_460066 |
| Sequence | ATTGAAGAAACCTAGTTTTTCCAATAAGTTCCAATAGCTACTTACTAAAACCCCTTCTTCAGCTTTTGGTGGAGGGAGAAGAGAAGAGAAACATGGCGAA CGAAGATCGGAGCAATTGGAGTGATCTTCTACACTCTTCCACGAAGCTTCTAGAACAAGCTGCTCCTTCCGCTCAGTTCCCTCCACTTCAGAGGAACTTA GATCAACTTGAAGCGTTGTCTAAGAAGCTCAAATCCAAGACCTTAAGGGCAGAGGCGCCTTCTCAATCTATTGCTGCTACAAGGCTCCTTGCCCGTGAGG GGATAAATGCAGAGCAGCTTGCAAGGGATCTGAAGTCATTTGAATTGAAGACCACATTTGAGGATGTTTTTCCTGTTGAGGCAACAAGTGTTGAAGAGTA TCTGCAGCAGGTTCATGAAATGGCAATGGTCTCTTCTGTCCAGGAAGCTCAGAAAGATAATATCAGAAGTTTTAACAATTACATGATGAAAGTTTTGGAG GAGGATTGGCAAAAGGAAAAGCGTGATTTCCTTCAGAGTTTAAATCGAATTTCAACATTACCTCGGACAAACATGAATGCTAATAGCAACGTTGGTACCC GCCCGGGTCAGATTATGTCTATAGCTTCCAGTCCACAAGTCTCTTCTGGTATGGAGGTTGTTCCTCTTACTAGTATTCCTATTATGGAGAAGAAGGCATC TATCTATGCTGAAGTTGTAAAAAACCTGAATAAATCAAGGGAGCGCGGGTTACCATTCAAGCCTGCTGCATCTTTCAAGAGCGCATATGAAAGTTTGGAC ATTGATGGTGGTGGTGGAAAATCAGTTACGATGCGGAAGATATGGCACCTTGTTCAGATGATGATGGATGGAGACCCAAGTCAGCAACGTGTTTCAGTAA GGATGTCACTGACTATTGGTGCAAGACGCCACCTTGAATTGGGACATGAGAAATACATCATGGACACCATACACAGTCATCCTGCACAAGCTGCTCTTGG CGGTGGCGTCGGGAATTTGCAAAGAATACGTGCCTTCCTTCGGATTCGGTTAAGGGATTATGGATTACTGGATTTTGATGCTGGTGATGCTCGGCGACAG CCTCCTGTTGATACTACATGGCAGCAGATATACTTTTGCTTGAGGTCTGGGTTTTATGATGAAGCAAGGAATGTTGCCCTATCTTCACGTGCCGCACATC AATTTTCTCCTTTGCTTACAGAGTGGATTAACACTGGAGGAATGGTACCAGAAGAGATTGCATCTGCTGCATCAGAGGAATGTGAAAGAATGTTGAGAAC TGGTGATCGGGTTGGACGAGCTGCCTATGACAAGAAAAAGTTACTGCTGTATGCCATCATATCAGGTTCTCGAAGACATGTTGATCGCTTGCTTAGAGAT CAACCAACTCTCTTTAGTACAATAGAGGATTTCTTGTGGTTCCAATTGTCAGCTGTACGTGACTGCCCTAGTGGACCTTCATCTATTGTTCTAAGTGATG GTCTGGTTCCATACAGTTTGGATGATTTGCAAATTTACCTCAATAAATTTGAACCATCATACTATACAAAAAATGGAAAAGACCCTCTGGTATATCCCTA CATCTTGCTTTTAAGCATTCAATTGCTGCCAGCTGTATTATACATGTCTAAGGAAACAGGTGATGAAGGATATAACATTGATGCTGTCCACCTATCCATT GTGCTAGCTGATCATGGGTTCCTCTCTGAAGGTGCTGGGCATAAGTTAGGAGTGATGGATGTTTATGCGGAAGTGTCTACCATTATTAGGCAGTATGGGT CCATGTATTTGCGTCTTTGTGATCTCCAAATGGCATTAGAATATTACGCTCAAGCTGCTGCTGCAGTGGGTGGTGGACAGTTGTCATGGACTAGTAGAGG TAATGTTGATCAGCAAAGGCAGAGAAATTCGATGCTGAAGCAGCTTCTAACTGAACTTTTGTTAAGGGATGGAGGCATATATCTTTTACTTGGTGCAAGA GGTTCTGGAGAAGAAGGTGAATTGGGTCGTTTTGTGACTGATCCAAAAGCGAGGCAACAATTTTTAATTGAAGCTGCTTTCCAATGTCAGGAGGCTGGGA TGTATGATAAATCTATTGAAATTCATAAGAGAGTGGGATCCTTTTCCGTGGCCCTGGATACCATCAACAAGTGCATCTCTGAAGCTATTTCTGCCCTTTT TCGTGGAAGATCAGATGGTGAAAGTCGGACTGCTGGCCTCATCCATTCTGGGAATGATATTTTGGAGACGTACACTTATTACCCTGATGTCAGTCTTCAA GAGAGACAGCTTGTCTTTGAGCAGCAAAATGTGTTAAGACAACTTGAGTCGGTATTGTCAATTCACAAATTGGCAAGACTAGGGAATTATGTGGATGCAA TAAGGGAGGTTGCTAAACTTCAATTTCTTCCGTTAGATCCCCGAGGCCCTGACATTGCTATCAACGTGTTTGAAAATTTATCTCCTCATCTAGAAGCTTG TATTCCAGATCTGTTGAAGGTTGCACTCACTTGTCTGGACAATGTGACAGATTCCGATGGATCACTTCGTGCTTTTCGGGCCAAGATTTCTAGTTTCATT GCAAACAATTTGAAGAGGAACTGGCCTCGTGATTTATACGAAAGAGTTGCACAGAGGTTGTGAAAGTATAAATATACGATGGGAATTGTTGTAGTATTTA AATTCTTGAGGACAACAGTAGTGTAACAATTGTAAAGTAACAAATTTTGCCTGTCATTCAATACACTTTCTAAAGCGAACTGATGCAGAACAATTCATCT CAAGGCTTCAATTTTTCCCCTCAATATCAACAGGGCTCAAATTTATAATAATCAACTAACTTCCAATTGGTTCATTCCATTCAAGCATACTTTTCTTTCA CAACCTATGTCAAACGTGACATAAATGTTGCACATGCTACCAAAGGCTTTCAAATTTGTTGGTTTTTGTTCATTCACTCTTTTACTCTGGAACCCAAAAG GGCTTCTGGGGTTACTAAATTTCATAAACGATCAATAAAAAGAAACCATTTTGGGTACAGAGAAGTATCAAAATTCTCACTTTATTGGGTTTTTCCATTG GAAATGTTATGTCACATTGACTATGTCTTTCCACACATTATTAGGTTCTACAAACCTGTGCAAGTTAAGGTCTCGTCATGTTCAAGCTATGACTCCATCT TCAGTTATTATGAATGCAGATGAAAGTGGCAAAATTTCTCAAAGTAAGAAGCTTAATGGCTCAAATCTTGCTCAGGAATAAAGGGTGAACATGTTTCTCC TTTGATCAGTCATGGTAATGCTGTTGGTATAATTGGAAGGGTGTCTGTTGATACCACCTTGATTTTTTAAAGAAAACTTGTGGAGTTGAGTTCAGATTCT TCAGAAGATGGAGTAAATTGTGACATATGTTCAGTTTCATGTAGGTTGATTTATTATGATAATATAATTGTTCATGATTGTTGAAGAATCACAGATGATA TGCAAAAAATGTGACTTACAACTTACAACTTGGGAGTTGTTTGGAATTTGAATAAATGGAATGTTGCTTTATTTAGAATATGTGATATTTGAATAAAGGT CTTTTTTTGGAATTTGAACTTATATTTGTGATGCTGAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_183064; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_460066
| Blastp | Nuclear pore complex protein NUP93A from Arabidopsis with 72.79% of identity |
|---|---|
| Blastx | Nuclear pore complex protein NUP93A from Arabidopsis with 72.79% of identity |
| Eggnog | nuclear pore complex protein(ENOG410XPN3) |
| Kegg | Link to kegg annotations (AT2G41620) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019457997.1) |
| Pfam | Nup93/Nic96 (PF04097.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |