Ll_transcript_460068

• Id Trinity: TRINITY_DN51190_c0_g2_i9
• Name Transcript: Ll_transcript_460068
• Sequence: ATTGAAGAAACCTAGTTTTTCCAATAAGTTCCAATAGCTACTTACTAAAACCCCTTCTTCAGCTTTTGGTGGAGGGAGAAGAGAAGAGAAACATGGCGAA CGAAGATCGGAGCAATTGGAGTGATCTTCTACACTCTTCCACGAAGCTTCTAGAACAAGCTGCTCCTTCCGCTCAGTTCCCTCCACTTCAGAGGAACTTA GATCAACTTGAAGCGTTGTCTAAGAAGCTCAAATCCAAGACCTTAAGGGCAGAGGCGCCTTCTCAATCTATTGCTGCTACAAGGCTCCTTGCCCGTGAGG GGATAAATGCAGAGCAGCTTGCAAGGGATCTGAAGTCATTTGAATTGAAGACCACATTTGAGGATGTTTTTCCTGTTGAGGCAACAAGTGTTGAAGAGTA TCTGCAGCAGGTTCATGAAATGGCAATGGTCTCTTCTGTCCAGGAAGCTCAGAAAGATAATCTCAGTAGTTTTAATGATTACATGATGAAAGTTTTTGAG GAGGATTGGCAAAAAGAAAAGCGTGATTTCCTTCAGAGTTTAAACCGAATTTCATCATTACCTAGGACAAACATGACTGTCACCAGCAGTGCTGGTACCC GCCCGGGCCAGATTGTGCCTACAGCTTCTAGTCCACAAGTCTCTTATGGTATGGAGGTTGTTCCTCTTACTAGTAGACCGATTATGGAGAAGAAGGCATC CGTCTATGCTGAAGTAGTGAAAAACCTGAATAAATCAAGGGAGTGTGGGTTACCATTCAAACCTGCGGCATCTTTCAAGGGCGCATATGAAAGTTTGGGC ATTGATGCTGGTGGTGGAAAATCAGTTACCATGCGGAAGATATGGCACCTTGTCCAGGTTGTACATAGCTGTATGCTGTTAACAGACAAAACAGAAAGAT AAACTTCTCTGTGCAACTTTCTTGGTGCCCCTTGTGTCAAAGTATTATTTTCCATAACTTGGCTCCTTGAAACAGATGATGATGGATGGAGACTCAATTC AGCAACATGTTTCAAAAAGGATGTCGTTGACTATTGGTGCAAGACGCCACCTTGAGTTGGGACACGAGAAATACATCATGGACACCATACACAGTCATCC TGCACAAGCTGCTCTTGGAGGCAGTGTTGGGAATTTGCAAAGAGTCCATGCCTTCCTTCGGATTCGCTTGAGGGATTATGGATTACTGGATTTTGATGCT GGTGATGCTCGGCGGCAGCCTCCTGTTGATACCACATGGCAGCAGATCTATTTTTGCTTGAGGTCTGGGTATTATGATGAAGCAAGGAATGTTTCCCTAT CTTCACGTGCTTCACATCAATTTTCTCCTTTGCTTACGGAGTGGATTAATACTGGGGGAGTGGTACCAGAAGAGATTGCATCTGCTGCATCAGAGGAATG TGAAAGAATGTTGAGAACTGGTGATCGGGTTGGTCGAGCTGCATATGACAAGAAAAAGTTACTTCTGTATGCTATCATATCAGGTTCTCGAAGACATGTT GATCGCTTGCTTAGAGATCAACCAACTCTCTTTAGTACAATAGAGGATTTCTTGTGGTTCCAATTGTCAGCTGTACGTGACTGCCCTAGTGGACCTTCAT CTATTGTTCTAAGTGATGGTCTGGTTCCATACACTTTGGATGACTTGCAAATTTACCTCAATAAATTTGAGCCATCATACTATACAAAAAATGGAAAAGA TCCTCTGGTATATCCCTACATCTTGCTTTTAAGCATTCAACTGCTTCCAGCTGTATTATACATGTCTAAGGAAGCTGGAGATGAAGGATATAACGTTGAT GCTGTCCACCTATCAATTGTGCTGGCTGATCATGGGTTCCTTTCTGAAGGTGCTGGTGCTGGGCATAAGTTAGGAGTGATGGATGCTTATGCAGAAGTGT CTACCATTATTAGGCAGTATGGATCTATGTATTTGCGTCTTAGTGATCTCCAAATGGCATTAGAATATTATGCGCAAGCTGCTGCTGCAGTGGGTGGTGG GCAGTTGGCATGGACTGGTAGAGGTAATGTTGATCAGCAAAGGCAGAGAAATTTGATGCTGAAGCAACTTTTAACTGAACTGTTGTTAAGGGATGGAGGC ATATATCTTTTACTTGGTGCAAGAGGTGCTGGGGAAGAAGGTGAATTGGGTCGTTTTGTGACTGATCCAAAAGCGAGGCAACAATTTTTAATTGAAGCTG CCTGCCAGTGTCAGGAGGCTGGGATGTATGATAAATCTATTGAAATTCAGAAGAGAGTGGGGTCCTTCTCCATGGCCTTGGATACCATCAATAAGTGCCT CTCTGAAGCTATTTGTGCCCTTTTCCGTGGCAGGTTAGATGGTGAAAGTCGAACCGCTGGCCTCATCCATTCCGGCAATGAGATTTTGGAGACGTACACG TATTACCCTGATGTCAGTCTTCAAGAGAGAGAGCATGTCTTTGAGCAGCAAAATGTGTTAAGACAACTTGAGTCGGTATTGTCAATTCACAAATTGGCAA GACTGGGGAACTATGTGGATGCAATAAGGCAGGTCGCCAAACTTCAATTTCTTCCTCTAGATCCTCGAGGCCCTGACATTGCTAACGACGTGTTTGAAAA TTTATCTCCTCATGTACAAGCGTGTATTCCAGATCTGTTGAAGGTTGCTCTCACTTGTCTGGACAATGTGACAGATTCTGATGGATCACTTCATGCTTTA AGGGCCAAGATTTCAAGTTTCATCGCAAACAATCTGAAGAGGAATTGGCCTCGTGATTTATATGAAAGAGTTGCTCAGAGGTTATGAAATTATAAATATA AGATGGGAATTGATGTAGCCTTTAAGTTGTTGAGGATAGTAGAATTTGGCTGGATGAAGGTTTTCAGTAGTGTAACAATTGTAAAGTAGTCTCAATGGCA TATTTGCTGGAACTATGCTGAGGAGATAGATATATTATGAGTAACTAGAAAAAAGAAATACACTTATCAATTTTCTCATCCTTTTTTGTGTTCTTGGTAA TATGCTTTTCACAGATTTATTTAACAAGAACATTGCTGGTGGAACCTGCGTAGTTTTTTTCTTTTCTGATTGTGGTTCATTTATGTTCAATGCTTTGTAA ACATTTTGCTTATGCTATGAAACCAGGTTTCGATTAAAAACTGAGAAGTAAATGTGTATAATCCGGAAAGGAGTTAACTCCATTATCCTATGATAAAGGG GATAAAACATGAATAAGACTAGAAAGTAACTATTGAA
• Tissue: pods
• Gene name: LI_gene_183064;
• Additional information: details;

Expression of Ll_transcript_460068

FPKM

• PAB: 0.3
• PNAB: 0.8
• PS1: 0.5
• PS2: 0.8
• PS3: 0.2
• PW1: 0.4
• PW2: 0.3
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_460068

• Blastp: Nuclear pore complex protein NUP93A from Arabidopsis with 73.45% of identity
• Blastx: Nuclear pore complex protein NUP93B from Arabidopsis with 71.4% of identity
• Eggnog: nuclear pore complex protein(ENOG410XPN3)
• Kegg: Link to kegg annotations (AT2G41620)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448099.1)
• Pfam: Nup93/Nic96 (PF04097.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;