Id Trinity | TRINITY_DN51194_c0_g1_i5 |
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Name Transcript | Ll_transcript_460934 |
Sequence | CTCCCTTTATTCTTGCTATGTTTTTATTTGTGCTAATTATTAATCAATTTATTTTATTTTAATTTTCCAATAAATAAATTTTCTTTTTTTTCTCTCCCCT TCTTCTTTTCTATTCTTGTTCTCTCTGAAATCCACACAACACAATGCATTTCCCTCTCTAAAATGCCATTTTCTCTTTCTCTGCAATTTTCTTCTTTCTC TCTCTCCATTGCTTTTGACCTAAATCCCTTTCTATACAATTCACTCTAATTGCTATCAAATTTTCACACCCCATTTCAATTCAAGGTTTTCTGCTTCGAA TCTCGTGGTGCTGAATTATTTGATCACAAAGTTTTTTATTTCAGTGGGTGTAAAAAAATTATTTTTTTTGCTGTTGGGTTTGTGAGGGGTTGATTTTGAA GGTACACTGCATGTTTGAGTGTTAAGGTGGGATCCTCTGCTCTCTGTTATTTGGAGGATTCCTGTGGCAGAGACTAGTGTTAATAACTTGTTCTGATTCT TGAGTTTGAGAGTTACTCTGCAATTTCCGAATTGTGTTTTCGGTGTTGAGTTCAATTTCTGGGAAAAAAATGTTCGGTTCTGTAGAGAATACTGGATATG AATATGATGCAAGTGGACTTTCAGGGCCCATTATGATTCCAAAGCGTTTTGTGTGGCCTTATGGGGGAAGAAGGGTGTTTCTAAGTGGTTCTTTTACGAG ATGGTCTGAAAATATACCTATGTCTCCCATGGAGGGATGTCCTTCAGTATTTCAAGTTGTTTGCAGCTTGACGCCGGGATATCATCAGTTCAAATTTAAT GTGGATGGTGAGTGGCGGCATGATGAGCACGAGCCATATGTAAGTGGCAACTATGGAGTAGTTAATACTATTTATTTAGTGAGAGAGCCAGATATTTCAC CTACAATCTTAAGTGCTGAAACACCTGGTAGATCTCACATGGAGGTTGATAACGACGCCTTTGGGCATGTGGAAGCTAATCCAAGAATTCCAGAGTCTGA TCTGGAGATCTCTCGCCACCGTATATCTACATTCTTGTCTACACATACTGCTTATGAGTTGCTCCCCGAATCAGGGAAGGTCATTGCCTTGGATATAAAT TTACCAGTTAAGCAAGCATTCCATATTCTTTATGAACAGGGCGTCTCGGTTGCTCCTCTATGGGATTTTGATAGGAGCCAGTTCGTTGGAGTGCTCAGTG CAATGGACTTTATTCTAATATTGAAAGAGTTGGGGAATCATGGCTCAAATTTGACTGAAGAACAACTCGAGACTCATGCTATATCAGCCTGGAAAGAGGG GAAATTTCAGCAACACAGAGTACTTGAGAGTAATGAGGGATCACATCCTTGGCGTTTTGTTCATGCTGGACCCCATGAATGTCTAAAAGATGTAGCTTTG AAAGCTTTGCAGAACAAGGTATCAATAGTTCCTATCGTCCATTCTGATTCAGAGGACGGTTCTTTTCCTCAATTGCTACATCTTGCTTCCCTATCAGGAA TACTAAAATGTATATGCAGGCATTTTAAGTATTCTTCTGGTTCTTTGCCGATCCTTCAACTACCGATCGGTTCAATACCCTTGGGAACATGGGTGCCTAA AGTTGGAGAACCAAATGGACAGCCACTTGCAATGCTAAGGCCAAATGCATCTCTTGGTGCTGCTTTGTCTATGTTTGTTCAAGGTGATCATTTTTCTGTT TTAAAGTTGTCAACATGTTTGTTCCGGTTAGTTTCTGTGTCCTGATGGTTTCTCATGAAGGGTCAAGGGATTCCTTCGAAGACTTTTTTGTATATAGATA TACGTATAAGTTGACAAAAGGAACATAAAACTGGAGTTTTTTTGAGCACATCGTAACCCCGTTCATTTGTGCATTAAACTAATAGAATCAGTCAGCTACT TCGACAAATATTGCATGGTGGGACTCAAATCTGAAAATGTATAATCAATTGTGAAGTTTCGTCGGCCGGGGGTACCTATTTACCGAGTCTCACAAGTACA TCTTATGATTTTTTAAATGGTTTTTGGCAAGAGGGTTAGAGGCATAATATTTCATGATTTGTGAATAGTTTTTCATCTTGCCATGGGAACTGGAAACTTT GTAATTCATGATCTAGTATGTGGCGTTCGCAGTGTTGCCAAAATCACAATACTTCGATATTAATCATTGTCTAGCTTTCGATAACTGCTCAGTAAATATG CTTCCCTTGCAGCTAAAGTTAGCTCAATACCAATCGTCGATGATAATGATTCATTGCTTGAAATATATTCAAGAAGTGATATTACTGCATTGGCTAAAGA TAAAGCTTATGCCCGGATATCTCTCGACGACATTAGTATCCATCAGGCATTGCTTTTGGGACAAGATGCAAATTCTCCTTATGGCCTTTACAGTGGCCAG AGATGTCACATGTGTTTGAGATCTGATTCATTGCACAAAGTGATGGAGCAGTTGGCTAAACCTGAGGTTAGAAGACTTGTGATTGTGGAAGCTGGGAGCA AGCGTGTAGAAGGGATCATTTCCTTAAGTGATGTGTTCAAATTCTTGTTCGGAATTGGGTAACCGGGATATCTCATATTTATGAAGGGACCCATTTGTTA TATAAATTAGCATTATGTTTTATGTGCTAAAATACCCCTTCCTATTTACATGGACCTCCTTATTTATTTATGTTGCTTATTTTTATGATAGAAAGAAATG TGATAGGAGAGAGTATATTCTGTAAATTGAGAATGAATTTTCTCCTTTAAACATCTTTTTTAACCAAATTGTTTTCTCCTTTGTGCCTGGCACATATGCA ATATTTGTGTCTAGTGCTCACAGAAATCAAGGAGAAAAACTGTGAAATAAAAGACTAGGAAAATGTGAACTATTTTGGTACATATGTTGTTGCTTGGTTG TAATTTATGGGTTTTTTTCCTACTGCTCAAATGTCCCTTATGATGAAGTGTAATGTTATATCTTCTTATAAACATGTCTCCTTTGGAACTTGCTAATGGA TATATAGAGTTTTGAAAGCAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_183091; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_460934
Blastp | Sucrose nonfermenting 4-like protein from Arabidopsis with 65.71% of identity |
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Blastx | Sucrose nonfermenting 4-like protein from Arabidopsis with 65.71% of identity |
Eggnog | Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth (By similarity)(COG0517) |
Kegg | Link to kegg annotations (AT1G09020) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019440569.1) |
Pfam | Glycogen recognition site of AMP-activated protein kinase (PF16561.4) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |