Id Trinity | TRINITY_DN51194_c0_g1_i9 |
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Name Transcript | Ll_transcript_460939 |
Sequence | CTCCCTTTATTCTTGCTATGTTTTTATTTGTGCTAATTATTAATCAATTTATTTTATTTTAATTTTCCAATAAATAAATTTTCTTTTTTTTCTCTCCCCT TCTTCTTTTCTATTCTTGTTCTCTCTGAAATCCACACAACACAATGCATTTCCTTCTAAAATGCAATTTTCTCTTTTTCCATTGTTTTTGACCTAAATCC CAATTCTACACAATTTACTCTAATTCCTTTATAATTTTCACACCCCATTTCAATTCAAGGTTTTCTGCTTCGAATCTCATGGTGATGAATTATTGATCAG AAAGTTTTTTATTTTAGTGGGTGTGAAAAAATTTCAAATTTTTGTAATTGGGAATGTGTAAGATTTTGTGTTGTGTTGATTGTGAAGGAACACTGCATGT TTGAGTGTTGAAGTTGGGGTCTTCTGTTCTCTGTTACTTGGAAGATTCCTGTGGCAGAGACTAGTGATAATAAGTTTTTTCTGATTGTTGAGTTTGATAG TTACTTTGAAATTTGTGAATTGTTCATTGTTGAATTTCTGGGGAAAATGTTTGGTTCGGTAGCGGATATTGGATATGAATATGATGTAAGTGGAGTTTCA AGACCTATTTTGATTCCGAAGCGGTTTGTGTGGCCTTATGGAGGAAAAAGGGTGTTTGTTACTGGTTCTTTTACAAGATGGTCTGAACATATACCCATGT CTCCGATGGAGGGATGCCCTTCAGTATTTCAAGTTGTTTGCAGCTTAGCACCGGGATATCATCAGGTTGTTTGGCCCCTTTGACTTTTGGAAAACTTGGT AAAATATAATTGTTCAAATTGAAGTACACCCGCCGTTTTCCACGCATTTTGCATTAGTACTAATGTAAACGCATTTGTAACAATGTTATTTATTTTGAAT ACCCGATGAAATATATTTACATTAAAATTTAAGTATTTATGATGTTTTCCACGAATTTTGCGTGAGTGCTAAGGTAACGTAAGAATATTTGTAACAATGT AACTATGTTTTTTCTGTCTAAGGAGTTAGGTAATAAATTAAGAAATGCAAGTATGTATGTATACACTGAAGTTTGGCCTCTAAAAAATTGGAAAACCTGA GGAATAGTCTTACATGCTTATATGTGGCCACTGACCATTAATTCTGAATGCACTTCCTTCTACTTGACAATCAAATGAGGAACTTCGTGATAATTTTCAA CTTTCATTAGGAGTATGTATCACATTATGACGATATTGAAGGGTAACCTGACATTACAAAGCTTGCCTATGCATGGGGTCCGGGGAAAGGTCAACCTACT ATGCGGGTCTATAGCATGCAGCCTTAACTTGCATTTGCAAGGGGCTGATTGTATGACTCGAACCCTAACCTCCAAGTCAGATCACACCAACTCGAGGCTC CAGCCATTGCATCAAGGCCGATCTTACTTGATGACCATATGGATGGGCTACAATTGGTGTGGCCTTCAAATGAGGCATAAGAGTTTTTCTGCTCCGCGTC CCTTTGGAGTTAAGTGGGTGAACAAGTAACCGTTAATGGTTGAATTTGAAATGAGAAAGTATTTTGGGTCACCCTCTTCACTATGGAGGAAGTCATGCAT TCAGGGAAGCATGTTTTCTCGGAAACGATATGGCCAACTAGATGGTAGGATAGACTAAGATGTATCTGACGGCATTGTATAAGACTTTATGTTTCGTATC TTGGGTATATAACCTATACTGTGATCAGACTGCCCTTTATCTATGCCTTTAATGTATGAACATGAAGCCCTTAAATCTATCATCTGCTTGGTTTAGTTCA TCCATCAAAACAATAGCGCACATATATATCATCAAGCTTTATTTTTATATTTGGAGGAGTAATTTTAGTTATATTGATTTTTATATCTCTCTGCATTGCT TGTCTGCTTCTCTTCCTTTATTCTATATAAGAATATTAGAAAACAAGATTGTTAGGTTCCAAGTGGTAAGGGTGAAGTGAGATTTGGGTATCATTCATCA AGTTTCCTTGTCAGAAAACACCGAGGAATAGTTATTCTATTTTATCATGAATAAATATACATAAGATTCTTTCGGAAAGTTCTATGGATTTTGTGTGTTA TATAACTCATCTTTTAACTGTTAGTATCCTGTCTTTTTCGTTAAGATGGGAATAATGTTTCTTAATTTGGGAGCTCAAAATTTTTTGGCAACTAAATTAA GGACTTTTAGTACACCGGTTTCTTATTTATGTTAACTTTTGATAAGGCATTCAATTATGACTTATGATGTTCAACAGTAGATATTATTTGATATTCAATC TATCTATGATGTATTTCACTTTCTGGCCTTTCACATTCTTTTATGCAATATTGATATGTTGAGTATATCCATCAGTCATGATAGAATCTGATATTTTAGA AAAATATTGAAAATACTTCTAAGCATATTTGGCAAGTATAGTATCTGGTTCAAACTGACAAGAATAATATTGTTTCCAATTATGTGTAGTTCAAATTCAA TGTGGATGGTGAGTGGCGACACGATGAGCATGAGCCCTGTGTAAGTGGGAACTTCGGAGTAGTTAATACTATCTATTTAGTGAGAGAGCCAGATATTTCA CCTGCAACCGTACATGCTGAAACACCCGGTAGATACCACATGGCGGTTGATAATGATGTCTTTGGGCATGTGGAAGCTAATCCAAGAGCTCAAGAATCTG ATCTGGAGGCCTCTCGTCTCCGTATATCTACATTCTTGTCTACACATACTGCTTTTGAGTTGCTCCCCGAGTCAGGGAAGGTCAATGCCTTGGATATAAG TTTACCAGTTAAGCAAGCATTTCACATTCTTTATGAACAGGGCATCTCGTTGGCTCCTCTATGGGATTTCGGCAGTAGCCAGTTTGTTGGAGTGCTTAGT GCAACGGATTTCATTCAAATATTGAGAGAGTTGGGGAATCATGGCCCGAATTTGACTGAAGAACAACTCGAGACCCATACTATAGCTGCCTGGAAAGAGG GAAAATTTCAGCAACGCGGAGCACTTGAAAGTAATGGGGAATCACATCCTTGGCATTTTGTTCATGCTGGGCCCAATGAATCTCTAAAAGATGTAGCTTT GAAAGCTTTGCAGAACAAGGTATCAATAGTTCCTATCGTCCATTCTGATTCAGAGGACGGTTCTTTTCCTCAATTGCTACCTCTTGCTTCCCTATCAGGA ATACTAAAATGTATATGCAGGCATTTTAAACATTCGCTTGTTTCTTTGCCGATCCTTCAAGTACCGATTGGTTCATTACCCTTGGGAACATGGGTGCCTA AAGTTGGAGAACCAAATGGACAGCCACTTGCAATGCTAAAGCCAAGTGCATCTCTTGGTGCTGCTTTGTCAATGTTTGTTGAAGCTAAAGTTAGCTCAAT ACCAATTGTGGATGATAATGATTCATTGCTCGACATATACTCAAGAAGTGATATTACTGCATTGGCTAAAGATAACGCTTATGCCCGAATATCTCTCGAG GACATTACTATCCATCAGGCATTGCTTTTGGGACGCGATGCAAATTCTCCGTATGGGCTTTACAACCACCGAAGATGTCACATGTGTTTGAGGTCCGATT CATTGCACAAAGTGATGGAGTGGTTGGCGAAACCCGAAGTTCGGAGACTCGTGGTTGTGGAGGCCGGAAGCAAGCGCGTCGAAGGGATTATTTCCTTAAG CGATGTGTTCAGATTCTTGTTCGGAATTGGCTAGCTTGTGATATCTCATATCATATGAAGGGGACTCAGTTTGTGATATGAATTAGCACTTATTTTTTGT CTTGCTTTTCTTAGGATAGAAAGAAATGTGGGATATGAGAGAGTATATTTTTGTAAATTGAGAATCAATTTTCTCCTTTGAACAGCTTAATCAAAATAGC TTTTTTTCCTTTGTGCCGGCACATATGAAATATTTGTGGCCAGTGCTTATAGAAGTGAAGGAGAAAAACTGTGAAATAAAACAAAATAAAAAGACTAGGA AAAGATGAACTATTTTGTGGAACATATGTGTTGGAATGTTGTAACTTAAGGTATTTTTTTATCTTATGTTTTATTTTCAGATCATTGTTACTTAAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_183091; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_460939
Blastp | Sucrose nonfermenting 4-like protein from Arabidopsis with 71.02% of identity |
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Blastx | Sucrose nonfermenting 4-like protein from Arabidopsis with 67.84% of identity |
Eggnog | Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth (By similarity)(COG0517) |
Kegg | Link to kegg annotations (AT1G09020) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019440569.1) |
Pfam | CBS domain (PF00571.27) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |