Ll_transcript_459926

• Id Trinity: TRINITY_DN51199_c0_g1_i3
• Name Transcript: Ll_transcript_459926
• Sequence: ATTCCCTGTTATGAAGAGAGGAGTTTAATTTTGTGAATTGACATAATTGGATTCACATCGAAAGAGGAAGGGAGAGAGAGAAGATGAGTAGGAACGATTC GAAATACTTCTCTACCACTAAGAAAGGTGAAATCCCCGAGCTCAAAGAAGAGCTCAATTCTCAGTACAAGGACAAAAGAAAAGATGCGGTGAAAAAGGTT ATTGCAGCAATGACTGTTGGGAAAGATGTATCGTCATTGTTCACGGATGTGGTGAATTGCATGCAAACAGAAAATTTGGAACTTAAAAAGCTAGTCTATT TGTATCTCATAAATTATGCTAAGAGCCAGCCTGACCTAGCAATTCTTGCAGTCAATACATTTGTCAAGGATTCACAAGATCCAAATCCTTTGATTCGTGC CTTAGCTGTGAGGACAATGGGCTGCATTCGTGTTGATAAAATTACTGAGTATCTATGTGATCCCCTTCAAAGATGCCTGAAGGACGATGATCCATATGTT CGTAAGACAGCAGCCATTTGTGTTGCTAAACTTTATGACATAAATGCTGAGTTAGTTGAGGACAGGGGTTTTTTGGAGTCCCTGAAGGATTTGATATCTG ATAATAATCCAATGGTTGTAGCCAATGCTGTGGCAGCCCTTGCTGAAATTCAGGAAAACAGTACTAGACCCATCTTTGAGATCACTGTTCCCACCCTGAC AAAGCTCCTTACTGCATTAAATGAGTGTACAGAATGGGGTCAAGTTTTTATATTGGATGCTCTTTCAAGATACAAGGCTGCTGATGCACGTGAAGCAGAA AATATAGTAGAAAGAGTTACTCCACGATTACAGCATGCAAATTGTGCAGTTGTCCTGTCAGCTGTTAAGATGATCCTTCAACAAATGGAGCTTATCACCA GTACTGATGTAGTTCGGAATCTTTGCAAAAAGATGGCCCCTCCTCTTGTTACGTTACTCTCTGCGGAACCTGAGATACAATATGTAGCATTGCGTAATAT CAATCTTATAGTACAAAGAAGACCAACAATTCTTGCTCATGAAATTAAGGTGTTCTTCTGCAAGTACAATGATCCTATCTATGTGAAAATGGAAAAGTTG GAAATTATGATAAAACTTGCTTCAGACCGAAATATAGACCAGGTTTTATTGGAATTTAAAGAGTATGCTACTGAAGTTGATGTAGATTTTGTTAGAAAGG CTGTACGTGCAATTGGTCGTTGTGCCATCAAATTAGAAAGAGCAGCTGAACGTTGCATTAGTGTTTTGCTTGAGTTGATCAAGATAAAAGTTAATTATGT GGTTCAAGAGGCAATCATTGTTATCAAAGATATATTTAGAAGATATCCTAACACATATGAGTCCATAATTGCTACACTTTGTGAGAACTTAGACACCTTG GATGAGCCAGAAGCCAAGGCATCAATGATCTGGATAATTGGTGAATATGCGGAAAGAATTGACAATGCTGATGAACTTCTTGAAAGTTTCTTGGAAAGTT TCCCTGAAGAACCCGCCCAAGTCCAACTACAATTGCTGACTGCTACAGTCAAACTTTTCCTTAAGAAGCCAACTGAGGGACCACAGCAGATGATTCAGGT TGTTTTGAACAATGCCACAGTGGAGACAGATAATCCGGATTTGCGAGATCGTGCATACATATATTGGCGTCTCCTTTCAACTGACCCCGAGGCAGCTAAG GACGTTGTGTTAGCTGAGAAGCCTGTTATAACTGATGACTCAAATCAGCTTGAACCTTCTCTACTTGATGAGCTTCTTGCCAATATTGCTACATTATCTT CTGTTTATCACAAGCCCCCAGAAGCTTTTGTAACTCGTGTACTCTCTTCAGCTCAGAGAACTGAAGAAGAAGACTATCCCGAGGGAAGTGAAACAGGGTA TTCTGAATCATCTGCAAATCCTACAAATGGTATTGCATCACCGCCTGCTACCAGGCAATCAGCACTTGCATCTGCAACAGCAGCACCAGCTACACCTCCA TCTGTTGTACCTGTGCCAGATTTACTTGGCGATTTAATCGGCATGGATAATAATTCAATTGTTCCTCTGGATCAGCCAGTTACTCCTACTGGGCCTCCAT TGCCTATTTTAGTACCTGCTTCAACTGGTCAGGGTTTACAAATCAGTGCACAAGTGGTTAGACGGGATGGTCAAATATTTTACAGTTTGTTGTTTGAGAA CACCACTCAGGTTCCACTTGATGGCTTTATGATTCAATTCAACAAGAACGCATTTGGTCTTGCAGCTGCTGGACCCCTACAGGTTCCACAAATACAACCT GGAACATCAGCTAGGACACTCCTTCCCATGGTCCTGTTCCAGAATCTGTCCCAAGGTCCTCCTAGCTCAGTTTTACAGGTTGCTGTGAAAAACAATCAAC AGCCTGTGCTTTATTTCAATGACAAATTCTCATTGCATGTATTTTTTAGTGAGGATGGTAGAATGGAACGTTCGAATTTCTTAGAGGTATATATTTTTTC ATTCCTTTGATCCCTTTTTTACATTAACTGCAAAGGTACTTCATGATTATATAAACTTTTATTCTTCGATGCGTAAAATCTTTTTTTCCTTGCATGGTAT TGTTATTTATAGACCAACACTGTTTAGTCGGATTAGCTGTTAAACATTTCCCAAATTAAACGGCTTTGCTACTTACTCTGATTAATACTTGAACGTACTA TAATGGATACATGATTATAACTATGCTGCAGACATGGAGGTCCCTTCCTGATTCAAATGAGATTTCCAAGGACTTCCCAACCATCGTGCTTAGCAGTGCT GAAGCAACACTGGACCGGCTTGCTGCATCAAACATGTTCTTTATTGCAAAGCGCAAGAATGCGAATCAGGATGTGTTTTACTTCTCAGCTAAACTCCCTC GAGGGATACCATTCTTGATTGAACTTACCACTGTGATTGGGAACCCTGGTGTGAAGTGTGCAATCAAGACTCCAAACCCTGAAATGTCTGCACTTTTCTT CGAAGCCATTGAGACTCTTCTCCTGGGTTAAAATGATATCTAAAATTACTTGTCTTCTATAATTTTTGTTTATATATTGTCTTTGTTGGCATAATTGATA AATATTCTGGATAGGCGTGTTGTATCTTATTTGGAAAAAAAAATCCCATTGATTATCTATCATATGCCCTTGTCAGCTATATTTCAATTTCACTGCTACT GCCATTTTGGCCTTCATTGAAACCCTGCAATATAATAGTGTCCTGATTACATTGATGCTGTTAAAAAA
• Tissue: pods
• Gene name: LI_gene_183129;
• Additional information: details;

Expression of Ll_transcript_459926

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.3
• PS2: 0.9
• PS3: 0.5
• PW1: 0.2
• PW2: 0.5
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_459926

• Blastp: Beta-adaptin-like protein C from Arabidopsis with 88.17% of identity
• Blastx: Beta-adaptin-like protein C from Arabidopsis with 87.67% of identity
• Eggnog: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins(COG5096)
• Kegg: Link to kegg annotations (AT4G23460)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444618.1)
• Pfam: Adaptin N terminal region (PF01602.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;