Ll_transcript_459927

• Id Trinity: TRINITY_DN51199_c0_g1_i4
• Name Transcript: Ll_transcript_459927
• Sequence: AAGAAGCCAACTGAGGGACCACAGCAGATGATTCAGGTTGTTTTGAACAATGCCACTGTGGAGACAGATAATCCTGATTTGCGAGATCGTGCATACATAT ATTGGCGTCTCCTTTCAACTGATCCTGAGGCAGCTAAGGATGTTGTGTTAGCTGAGAAGCCTGTTATAACTGATGACTCAAATCAACTTGAACCTTCTCT ACTGGATGAGCTTCTTGCCAACATTGCTACATTATCTTCTGTTTA
• Tissue: pods
• Gene name: LI_gene_183129;
• Additional information: -

Expression of Ll_transcript_459927

FPKM

• PAB: 7.1
• PNAB: 19.3
• PS1: 21.3
• PS2: 13.8
• PS3: 21.5
• PW1: 22.5
• PW2: 19.3
• PW3: 10.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_459927

• Blastp: -
• Blastx: Beta-adaptin-like protein C from Arabidopsis with 97.53% of identity
• Eggnog: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins(COG5096)
• Kegg: Link to kegg annotations (AT4G23460)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423358.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;