Ll_transcript_519527

• Id Trinity: TRINITY_DN51202_c1_g1_i10
• Name Transcript: Ll_transcript_519527
• Sequence: CGTGTAAACTTTATATAGCGTACCAAACACTGTTCATTGCTGAAACTCATTTCACTTCTCTCTCTCTGCAAAACTAAGAGAGAATAATGAGTGAAACTGA AAAAATGGAGCAAATTCAAAAGCTAATAGGAACAATTTCACAACCTCACCCTTCACGAATTCCCATTCTCAATCTATTCAACCTTTACTTGGGTAGACAT AGCCTCCAGAAACGTGATGATTTAATCAGGGAACCCCCGAACAAAGCCCAAAAACGTGTGCTTGCTCTTAACCGAGAGCTCCCTCCACCAAATGAGCAGT TTCTTCAAGATTTTATGCAACTCAAGAACCAGTTTCCCTTTTACTTTCAGGACCAAGATCAGTTACGTTCCGTGACCGAGTCTATTCTCATATTTCTAGT CATGCAGTGTAGTAGTCATGGAATACGGGCAGAGTTTCTTCTTTATGCTATTCGAAGTTTGTGCAGTGCTGAGTACATTAACTGGGAGACTTTCTTGCCA TCTCTCCTTTCTTCAGTTTCTTCGGCAGAGTTTCCTGTTGATCAAGGGAATCAGTTGATGCCAACTGTTTATTCTAATTTTCAGCCTTCAAATTCTGCTT CTCAATTACCTTCAGTTCATCCTATGGGCTACCCTGCACGATCAACTAGTGAACCATTATCTTCTGCAGCTTTATCTCCAGTCAAATCACCTGATACTTC CTGCACTGGACAACATTCTCAATTGAAAGTGCCATCTATTAGAAATAATGACATCAGCAGCCTTCGTCAGCTATGTTGCAAGATTATTTTAATCGGGCTG GAGTTTGATCTAAAACCCATGGTTTATTCTGCAATATTGAACCATATGCTGAATTGGTTGGTGAACTGGGACCAGAGGCAACAGGGAATTAACGAGCCCG ATGCACCAAAATCATTTAGACCTGACAAAGCCATAATAGGTTGGATGCACAGTTGTTTGGATGTGATCTGGCTTTTAGTCGACGGGGGAAAATGCCGAGT GCCCTTTTATGAATTATTACATAGCGATTTGCAATTCATGGACAATATTCCTAATGATGAAGCAATATTTACACTTATCTTGGAGATCCACAGGAGACGA GATATGATGGCCATGAACATGCAAATGTTAGATCAGCATCTTCATTGCCCTACATTTGGGACGCATCGGATCTTGACTCAAGCAATGCCAAATGTTTCAG CAGAAGCAGTAGCACATCTGCGGCTAACGCCAATCACATATTTAAGTGTACTTGGAGAACCACTGAATGGAGAGGATATTGCATCTTCTATCCAGAAGGG AAGTTTGGATTGGGAGAGAGCTTTACGCTGTATAAGGCATGCTATCCGCACTACACCGTCACCTGATTGGTGGAGACGTGTGCTGTTACTAGCTCCTTGC TACAGGCCTTCATCTCAAGGGCTTTCCCCTGGTGCTGTTTTTTCTTCAGAAATGATCTGTGAGGCAACTATTGATCGAGTTGTTGAACTGTTGATACTGA CAAATTCAGAGATAAATTGCTGGCAGGACTGGCTTGTCTTCTCTGATATATTCTTCTTTCTTATAAAAAATGGGTGCATTGATTTTGTTGATTTTGTGGA TAAGCTGGTGTCACGTCTTACACAGGGTGATCAACATATTCTTAAGACCAATCATGTGACTTGGCTGTTTGCACAGATAATGCGAGTCGAGCTGGTTATG AACGCTTTGAATTCAGATGCTAGAAAGATGGAGACAACCAGAAAGATTTTATCATTTCATAGAGAAGAGAGAAATTCTGATTCTACTAGCCCTCAAAGCA TCTTGCTCGATTTTGTAAGCAGCTGTCAATCTTTATGTATTTGGTCTTTGAATTCATCAACCAGAGAATTTGTGAACAATGAGCTGCGGCAGAAAGGAAA ACTAATAGATGAATGGTGGAAACAAGTCAGCAAAGGGGATCGCATGATGGATTATATGAATATGGATAAACGCTCATTAGGGATGTTTTGGGTTTTGTCG TACACAATGACACAACCTGCTTGCGAAACAATATTGAAATGGTTAACTTCTGCTGGAGTTATCGACTTATTACCGGGAACAAACCTTCAGCCAACTGAGA GATTAGTGGCTACACGAGAAGTGAGCCCATTGCCCATGTCATTGTTATCTGGAATGTCGATGGGCTCATGTATGAAACTGTCTTTACAACTGGAAGAATC TCTGTTTTCGGGGCAGGTTGTACCCAGCATAGCAATGGTTGAAACATATAGTAGAGTGTTGCTCATTTCACCCCATTCTCTATTTCGTTCACATTTCAGT CATTTAGCACAAAAGAATCCTTCTTTGTTGAGCAAGCCTGGAGTAAGACTTTTGGTGCTTGAGATATTGAACTACCGATTACTTCCGCTTTACAGGTATG AGGGAAAAACCAAATCCTTGATGTATGATGTTACAAAGATTATTTCTGCTCTAAAAGGAAAAAGAGGAGATCATCGAGTATTCAGATTAGCTGAAAATCT GTGTCTGAATCTCATTTTCTCATTGAGAGATTTCTTCATGATTAAAAGGGAAGGGAAGGGACCAACTGAGTTTACAGAAACCTTGAATCGAGTAACTGTT ATAACACTTGCTATCCTTATTAAAACATGTGGGATTGCAAATGTTGAACACATGCTTTATCTCCGAACTATGTTAGAACAAATATTGTCAACCAGCACAC ATACATGGTCAGAAAAAACACTACGCTACTTTCCTTCAGTTCTGCGTGAAGCGTTGGGCGGTCTTCTAATAGATAAAAGAAGCCTTGCAATACAAGCATG GCAGCAGGCAGAAACCATTGTTTTACACCAGTGCACTCAGATTCTTTCATCATCAGCTGATGCTAGTTATGTGACAACCTATATTGGTCATAGTTTCCCT CAGCATCGACAATATTTGTGCGCTGGTGCATGGATATTAATGCATGGCCATGCTGAAACGATTAACGGTGGAAACCTGGGGCGTGTGCTGGGGGAATTTT CTCCTGAAGAGGTGACATCTAACATTTATACAATGGTGGATGTTTTGCTTCATCATATGCAAATGCAGCTCCAACAAGGACATGCCTTACAGGACCTTCT ATTGAAAGCTTGTGCAAGCCTTGGCTTTTTTGTTTGGACGAATGAGCTACTTCCTTTGGATATCTTGCTTCTAGCACTTATTGATCGTGATGACGATCCG CATGCCTTGCGTATTGTGATTACTCTTCTTGATAGGCAAGAGCTTCAGCAAAGAGTAAAACACTTTTGTATGACACGTGGGCACCATGAACATTGGCTTT ATTCTGGCATATTCAAGCGCGTTGATCCATCAAAGGCTCTTGGAAATTACCTCTCATGGAAGGATAGGTATCCAGTGTTCTTTGATGATATTGCAGCACG CTTGCTTCCGGTCATCCCCTTAATTATTTATAGACTTATTGAAAATGATGCTATGGAGCCAGCAGACAGAATACTGGCCTTGTATTCTTCACTTCTTGCT TATTACCCTCTAAGATTTTCCTTTGTTCGTGATATACTTTCATACTTCTATGGTCATCTTCCTGGAAAGCTGATTGTTCGAATACTCCAAGTACTTGATA TCAATAAGATTCCCTTCTCAGTGTCGTTCCCACAGCAAATAAGTTCATCAAATCCCGTCACATGCCCTCCTCTGGATTATTTTGCGACATTATTATTGGG AATAGTGAATAATGTTATTCCTCCATTACATGATTCAAAATCTGGATCAGTGGAAGGTGCTTCAAACAATGCACTGCGTACTCCACCTAACAAGCCTCCA GCTGTATCTCAGCCCGAATCAGAAAATGCTCCTGAGGGCAAGAAGGCGTTCTACCAAATTCAGGATCCCGGAACATATACTCAGCTAGTTCTTGAGACTG CGGTCGTCGAAATACTTTCCCTTCCTGTATCTGCCTCTCAGATAGTACATTCACTTGTTCAAATTATTCTTAATATACAACCAATGCTGATCCAGTCCAG CAATGGTATCCATGGTGGTTTAAATGGTGCCGGACAAGGTTCAGTATTTTCGACATCGCCCTCCGGAGGAAGCTCAGATTCCTTGGGTGCAAGCAGATCA ACTCCTTCAGTTTCCGGAATAAATACCTCTAACTTTGCTTCACAAAGTGGTTATACATGCCAACAATTGTCTTGCTTGTTGATTCAAGCTTGTGGACTCC TGCTGTCTCAGCTTCCTTCTGATTTTCACTTTCAATTTTACTTGGAGACGGCACGAATTATAAAAGAGAACTGGTGGATTGCAGATGGGAAAAGGTCACT TGGAGAAATAGACTCTGCTGTTGGCTATGCTTTGTTAGATCCAACTTCGGCTGCAGAGAACAATACCTCAACACCAATTGGGAATGTGGTTGCCTTGCTT CATTCTTTCTTCAGTAACCTCCCACTAGAATGGTTAGAAAGGACCCATGTTGTCATCAAGCAACTTCAGCCAGTAACATCAGTCGCAATGTTGAGAATAG CATTCCGTATAATGGGTCCACTCCTTCCAAAACTTCTGGGTGCTCATGCACTTTTCAACAAGACCCTTTCATTACTATTAAGTACACTAGTGGATGTATT TGGAACAAACTCTCAGCATTCAACTGCTGTTGAAGCATCAGAAATAACTGATCTCATTGACTTCATCCATCATGTCGTCCATTACGAAGGGCAGGGAGGT CCTGTGCAAGCTAGCAGCAAACCTCGACCGGAAGTTTTGGCTCTTATCGAAAGCTCATCTGAGAATCTACGTCCAGACATTCGGCATCTGATGCTACACC TGAAGACTGATGTAAATTCTTCTATTTACGCGGCTATGTCTCATCCAAAGTAAGTGCCAGATTATAGTCCGAGCCTATGAAGCACAGACACTTCAAATGA ACATGTATCCATATCCGACATCGCATGAATACTTTTGGTAGCTCCTAATTGTATTTGTTAATTTTTTAAATTTTTATACCATCATAGACAAAAATATCAA AATAAGTAGATAACTATTAGCATTTTATTATATTCCAAATTATTTACACTATTAAAACATTATTCCTCACTTCTAGTGTAAGATTTGTGCTTTTATCCTA ACTTTATATTAATTTCATATCTTGTATCATAATTATATCGTGTACAATAATTTTAAAATATTCCATGTACTTGTGTATCGTGTCTTATACTATCTTTGTC ATGTGTTGTATTATTTGTATAATCACTTTGTATTGTATTATATTCATGAAGTAAGCATCTTCATATTGTTATTGTATTCCAAACTCTAAAAGTCATCAAT AACTCTTGTGCATGGGCGCTTTATTTAATTGTAAATTAGTCTAAACTTTCTATTGAGTAGTGAGTG
• Tissue: pods
• Gene name: LI_gene_183156;
• Additional information: details;

Expression of Ll_transcript_519527

FPKM

• PAB: 1
• PNAB: 0.2
• PS1: 0.3
• PS2: 0.6
• PS3: 0.5
• PW1: 1.7
• PW2: 0.1
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_519527

• Blastp: Mediator of RNA polymerase II transcription subunit 23 from Arabidopsis with 66.32% of identity
• Blastx: Mediator of RNA polymerase II transcription subunit 23 from Arabidopsis with 66.32% of identity
• Eggnog: Mediator complex subunit 23(ENOG410ZH5R)
• Kegg: Link to kegg annotations (AT1G23230)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019424086.1)
• Pfam: Mediator complex subunit 23 (PF11573.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;