| Id Trinity | TRINITY_DN51202_c1_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_519529 |
| Sequence | CGTGTAAACTTTATATAGCGTACCAAACACTGTTCATTGCTGAAACTCATTTCACTTCTCTCTCTCTGCAAAACTAAGAGAGAATAATGAGTGAAACTGA AAAAATGGAGCAAATTCAAAAGCTAATAGGAACAATTTCACAACCTCACCCTTCACGAATTCCCATTCTCAATCTATTCAACCTTTACTTGGGTAGACAT AGCCTCCAGAAACGTGATGATTTAATCAGGGAACCCCCGAACAAAGCCCAAAAACGTGTGCTTGCTCTTAACCGAGAGCTCCCTCCACCAAATGAGCAGT TTCTTCAAGATTTTATGCAACTCAAGAACCAGTTTCCCTTTTACTTTCAGGACCAAGATCAGTTACGTTCCGTGACCGAGTCTATTCTCATATTTCTAGT CATGCAGTGTAGTAGTCATGGAATACGGGCAGAGTTTCTTCTTTATGCTATTCGAAGTTTGTGCAGTGCTGAGTACATTAACTGGGAGACTTTCTTGCCA TCTCTCCTTTCTTCAGTTTCTTCGGCAGAGTTTCCTGTTGATCAAGGGAATCAGTTGATGCCAACTGTTTATTCTAATTTTCAGCCTTCAAATTCTGCTT CTCAATTACCTTCAGTTCATCCTATGGGCTACCCTGCACGATCAACTAGTGAACCATTATCTTCTGCAGCTTTATCTCCAGTCAAATCACCTGATACTTC CTGCACTGGACAACATTCTCAATTGAAAGTGCCATCTATTAGAAATAATGACATCAGCAGCCTTCGTCAGCTATGTTGCAAGATTATTTTAATCGGGCTG GAGTTTGATCTAAAACCCATGGTTTATTCTGCAATATTGAACCATATGCTGAATTGGTTGGTGAACTGGGACCAGAGGCAACAGGGAATTAACGAGCCCG ATGCACCAAAATCATTTAGACCTGACAAAGCCATAATAGGTTGGATGCACAGTTGTTTGGATGTGATCTGGCTTTTAGTCGACGGGGGAAAATGCCGAGT GCCCTTTTATGAATTATTACATAGCGATTTGCAATTCATGGACAATATTCCTAATGATGAAGCAATATTTACACTTATCTTGGAGATCCACAGGAGACGA GATATGATGGCCATGAACATGCAAATGTTAGATCAGCATCTTCATTGCCCTACATTTGGGACGCATCGGATCTTGACTCAAGCAATGCCAAATGTTTCAG CAGAAGCAGTAGCACATCTGCGGCTAACGCCAATCACATATTTAAGTGTACTTGGAGAACCACTGAATGGAGAGGATATTGCATCTTCTATCCAGAAGGG AAGTTTGGATTGGGAGAGAGCTTTACGCTGTATAAGGCATGCTATCCGCACTACACCGTCACCTGATTGGTGGAGACGTGTGCTGTTACTAGCTCCTTGC TACAGGCCTTCATCTCAAGGGCTTTCCCCTGGTGCTGTTTTTTCTTCAGAAATGATCTGTGAGGCAACTATTGATCGAGTTGTTGAACTGTTGATACTGA CAAATTCAGAGATAAATTGCTGGCAGGACTGGCTTGTCTTCTCTGATATATTCTTCTTTCTTATAAAAAATGGGTGCATTGATTTTGTTGATTTTGTGGA TAAGCTGGTGTCACGTCTTACACAGGGTGATCAACATATTCTTAAGACCAATCATGTGACTTGGCTGTTTGCACAGATAATGCGAGTCGAGCTGGTTATG AACGCTTTGAATTCAGATGCTAGAAAGATGGAGACAACCAGAAAGATTTTATCATTTCATAGAGAAGAGAGAAATTCTGATTCTACTAGCCCTCAAAGCA TCTTGCTCGATTTTGTAAGCAGCTGTCAATCTTTATGTATTTGGTCTTTGAATTCATCAACCAGAGAATTTGTGAACAATGAGCTGCGGCAGAAAGGAAA ACTAATAGATGAATGGTGGAAACAAGTCAGCAAAGGGGATCGCATGATGGATTATATGAATATGGATAAACGCTCATTAGGGATGTTTTGGGTTTTGTCG TACACAATGACACAACCTGCTTGCGAAACAATATTGAAATGGTTAACTTCTGCTGGAGTTATCGACTTATTACCGGGAACAAACCTTCAGCCAACTGAGA GATTAGTGGCTACACGAGAAGTGAGCCCATTGCCCATGTCATTGTTATCTGGAATGTCGATGGGCTCATGTATGAAACTGTCTTTACAACTGGAAGAATC TCTGTTTTCGGGGCAGGTTGTACCCAGCATAGCAATGGTTGAAACATATAGTAGAGTGTTGCTCATTTCACCCCATTCTCTATTTCGTTCACATTTCAGT CATTTAGCACAAAAGAATCCTTCTTTGTTGAGCAAGCCTGGAGTAAGACTTTTGGTGCTTGAGATATTGAACTACCGATTACTTCCGCTTTACAGGTATG AGGGAAAAACCAAATCCTTGATGTATGATGTTACAAAGATTATTTCTGCTCTAAAAGGAAAAAGAGGAGATCATCGAGTATTCAGATTAGCTGAAAATCT GTGTCTGAATCTCATTTTCTCATTGAGAGATTTCTTCATGATTAAAAGGGAAGGGAAGGGACCAACTGAGTTTACAGAAACCTTGAATCGAGTAACTGTT ATAACACTTGCTATCCTTATTAAAACATGTGGGATTGCAAATGTTGAACACATGCTTTATCTCCGAACTATGTTAGAACAAATATTGTCAACCAGCACAC ATACATGGTCAGAAAAAACACTACGCTACTTTCCTTCAGTTCTGCGTGAAGCGTTGGGCGGTCTTCTAATAGATAAAAGAAGCCTTGCAATACAAGCATG GCAGCAGTTATAAACCAGAAAGGTGTGCCTAATCAGTGCCTTAACCAGTAAGAGGCACCTACCCCATTTACAACATGCTTTTAACTGAGCCAAAGGTGTA CTTATGTTTGTGGTGATGTTAGTCATTACATAAATGTCATGGTTAAAGGCAAAGCTGAAGTACATAAGGAATCAGTGTGTGAAAGAAGTGATTGGTTTGA AGCAGTGAGGATTTGAAGAATATGTATTAATCTTTCTCACGGCGAAAAACAAATGAATGGTGCTGCTCCAAGCTTGAAGTCTAAATGGATTTTACATGGC AGAGCATCTTAGAGATATTAACCCTTATGGGCTGACACCTAGGAGCTTAACTTACTAGGAGAGTGGTTTCTGGACATAGACCATTGCATTAATATATACA TTTAGATTTGAATGTCTATTGTGTACAAACTTTACTGAATTAAGCATGGCATGGACTGCACTATTATCACATACATTTTAACTTTAGAGCTACATGGTTA CAACTGTTTCTACTTTGTATATATGAGATAATTAGATAAAGTTTGTATGCAATGGCAATAACTGGATAGCAATGTTTAAGTTCTATCAAACTATGTTAGA GGGACAAGATGTAGTAAATACATTAATAAAAATTTGTTATTTTTATGTGCTAACTTTTTCTAAGCATTTAAATTAATTCTGAAGAGATTTGTGCAGGCAG AAACCATTGTTTTACACCAGTGCACTCAGATTCTTTCATCATCAGCTGATGCTAGTTATGTGACAACCTATATTGGTCATAGTTTCCCTCAGCATCGACA ATATTTGTGCGCTGGTGCATGGATATTAATGCATGGCCATGCTGAAACGATTAACGGTGGAAACCTGGGGCGTGTGCTGGGGGAATTTTCTCCTGAAGAG GTGACATCTAACATTTATACAATGGTGGATGTTTTGCTTCATCATATGCAAATGCAGCTCCAACAAGGACATGCCTTACAGGACCTTCTATTGAAAGCTT GTGCAAGCCTTGGCTTTTTTGTTTGGACGAATGAGCTACTTCCTTTGGATATCTTGCTTCTAGCACTTATTGATCGTGATGACGATCCGCATGCCTTGCG TATTGTGATTACTCTTCTTGATAGGCAAGAGCTTCAGCAAAGAGTAAAACACTTTTGTATGACACGTGGGCACCATGAACATTGGCTTTATTCTGGCATA TTCAAGCGCGTTGATCCATCAAAGGCTCTTGGAAATTACCTCTCATGGAAGGATAGGTATCCAGTGTTCTTTGATGATATTGCAGCACGCTTGCTTCCGG TCATCCCCTTAATTATTTATAGACTTATTGAAAATGATGCTATGGAGCCAGCAGACAGAATACTGGCCTTGTATTCTTCACTTCTTGCTTATTACCCTCT AAGATTTTCCTTTGTTCGTGATATACTTTCATACTTCTATGGTCATCTTCCTGGAAAGCTGATTGTTCGAATACTCCAAGTACTTGATATCAATAAGATT CCCTTCTCAGTGTCGTTCCCACAGCAAATAAGTTCATCAAATCCCGTCACATGCCCTCCTCTGGATTATTTTGCGACATTATTATTGGGAATAGTGAATA ATGTTATTCCTCCATTACATGATTCAAAATCTGGATCAGTGGAAGGTGCTTCAAACAATGCACTGCGTACTCCACCTAACAAGCCTCCAGCTGTATCTCA GCCCGAATCAGAAAATGCTCCTGAGGGCAAGAAGGCGTTCTACCAAATTCAGGATCCCGGAACATATACTCAGCTAGTTCTTGAGACTGCGGTCGTCGAA ATACTTTCCCTTCCTGTATCTGCCTCTCAGATAGTACATTCACTTGTTCAAATTATTCTTAATATACAACCAATGCTGATCCAGTCCAGCAATGGTATCC ATGGTGGTTTAAATGGTGCCGGACAAGGTTCAGTATTTTCGACATCGCCCTCCGGAGGAAGCTCAGATTCCTTGGGTGCAAGCAGATCAACTCCTTCAGT TTCCGGAATAAATACCTCTAACTTTGCTTCACAAAGTGGTTATACATGCCAACAATTGTCTTGCTTGTTGATTCAAGCTTGTGGACTCCTGCTGTCTCAG CTTCCTTCTGATTTTCACTTTCAATTTTACTTGGAGACGGCACGAATTATAAAAGAGAACTGGTGGATTGCAGATGGGAAAAGGTCACTTGGAGAAATAG ACTCTGCTGTTGGCTATGCTTTGTTAGATCCAACTTCGGCTGCAGAGAACAATACCTCAACACCAATTGGGAATGTGGTTGCCTTGCTTCATTCTTTCTT CAGTAACCTCCCACTAGAATGGTTAGAAAGGACCCATGTTGTCATCAAGCAACTTCAGCCAGTAACATCAGTCGCAATGTTGAGAATAGCATTCCGTATA ATGGGTCCACTCCTTCCAAAACTTCTGGGTGCTCATGCACTTTTCAACAAGACCCTTTCATTACTATTAAGTACACTAGTGGATGTATTTGGAACAAACT CTCAGCATTCAACTGCTGTTGAAGCATCAGAAATAACTGATCTCATTGACTTCATCCATCATGTCGTCCATTACGAAGGGCAGGGAGGTCCTGTGCAAGC TAGCAGCAAACCTCGACCGGAAGTTTTGGCTCTTATCGAAAGCTCATCTGAGAATCTACGTCCAGACATTCGGCATCTGATGCTACACCTGAAGACTGAT GTAAATTCTTCTATTTACGCGGCTATGTCTCATCCAAAGTAAGTGCCAGATTATAGTCCGAGCCTATGAAGCACAGACACTTCAAATGAACATGTATCCA TATCCGACATCGCATGAATACTTTTGGTAGCTCCTAATTGTATTTGTTAATTTTTTAAATTTTTATACCATCATAGACAAAAATATCAAAATAAGTAGAT AACTATTAGCATTTTATTATATTCCAAATTATTTACACTATTAAAACATTATTCCTCACTTCTAGTGTAAGATTTGTGCTTTTATCCTAACTTTATATTA ATTTCATATCTTGTATCATAATTATATCGTGTACAATAATTTTAAAATATTCCATGTACTTGTGTATCGTGTCTTATACTATCTTTGTCATGTGTTGTAT TATTTGTATAATCACTTTGTATTGTATTATATTCATGAAGTAAGCATCTTCATATTGTTATTGTATTCCAAACTCTAAAAGTCATCAATAACTCTTGTGC ATGGGCGCTTTATTTAATTGTAAATTAGTCTAAACTTTCTATTGAGTAGTGAGTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_183156; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_519529
| Blastp | Mediator of RNA polymerase II transcription subunit 23 from Arabidopsis with 64.68% of identity |
|---|---|
| Blastx | Mediator of RNA polymerase II transcription subunit 23 from Arabidopsis with 63.4% of identity |
| Eggnog | Mediator complex subunit 23(ENOG410ZH5R) |
| Kegg | Link to kegg annotations (AT1G23230) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019424086.1) |
| Pfam | Mediator complex subunit 23 (PF11573.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |