Id Trinity | TRINITY_DN51202_c1_g1_i15 |
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Name Transcript | Ll_transcript_519532 |
Sequence | CTGAAACCAACGTACACTTTTCTCACTCTTCACTCTTCTGTCACTCTCTTGTGGGGTCACTTTCTCTCTATGTCTTGTCTTTTCAATCTTTTCTCTTTCT CTCTCTCTCTCTTTTGATTATTGAATGCAACAAAACTTGTTCAAAGATGAATGATCAAACTGAAAGAACTTCAACACAATCGCGTTCTTCAATTCTCGAT CTCTTTAACCTTTACTTAGGACTTGGGAAATCTCAATACCCATTTCGAGAACCACCGAACAAAGCACAAAAACGTGTACATGCTCCTAATCGAGATCTCC CTCCACCAAATGACCAGTTCATTCTAGATTTTGAAAAAATTCAGAGCCAGTTCCCTGACCAAGATCAATTACGTTCTGTGACAGAATCTATTCTTATATT GCTAGTCGGGCAGTGTAGTGGTCATGGACCACGGTCAGACTTTCTTCTATTTGTTTTACAGAGCTTGAGCAGTATTGGGTACATTAACTGGGACACGTTC CTACAATCCCTTCTTTCTTCAGTTTCTTCGGCAGAAGTGCAAGGTCAACTTAACCAGGCTATGCCAACTGTTTCCTCCTCAAGCTTATCACATTCAGGAA TACTTCCACCTCCCGGCACAATTGCTAATACTTCTAATTTTCAGTCGTCAAATCCTGCATCTCCATTGCCTTCTGTTCATCCTATTGGCTCCCCTGCACA GTCAACTATTGAACCATTATCTTGTGCAACTTTATCTCCTGTCAAATTGTCTGATATTTCCTCCGCTGGACAACAATCTAAACTTAGAGGCACCCCATCT GTTAGAAATAATGATATTAGCAGCCTTCGTCAGCTATGTTGTAGGATTATACTAGTCGGCCTCGAGGCTACTTTAAAACCTACTACTTATACTGAAATTT TCCATCATATGATGAATTGGCTGGTAAATTGGGATCAGAGGCAACGGGGAGTTGACGAATCTGATATGCTAAAATCATGGAGACCTGACAAAGCATTAAG TGCATGGCTACACAGTTGTTTGGATGTGATCTGGCTTTTAGTTGACGAGGGAAAATGCCGGGTGCCCTTTTATGAATTATTACGTAGTGATTTGCAATTC ATAGAGAATATTCCCGATGATGAAGCATTGTTTACACTTATCTTGGAGATCCACCGGAGAAGAGATATGATGGCTATGCACATGCAAATGTTAGATCAGC ATCTTCATTGCCCTACATTTGGGACTCCTCGGATCTTGAATCAAACAACACCTAATATTTCAGGTGATGCAGTAGCACAACTACGACTATCACCGATTAC ATACTTAAGTGTACTTGGAGAACCATTACACGGAGAGGATATTGCATCTTCTATCCAGAAGGGTAGTTTGGACTGGGAGAGAGCTGTACGTTGTATAAGG CATGCTCTCCGCACTACACCTTCACCTGACTGGTGGAGACGCGTTTTGTTATTGGCTGCTTGCTATAGGCCTCCATCTCAAGGGCCTACTCCTGGTGCTG TTTTTTCTTCAGATATGATCTGTGAGGCAACTATTGATAGAATTGTTGAACTACTGAAATTGACAAATTCAGAGGTAAATTGCTGGCAGGATTGGCTTGT CTTCTCTGATATTTTCTTTTTCCTTATGAAAAGTGGGTGCATTGATTTTGTTGACTTTGTGGACAAGCTGGTTTCACGTCTTTCAGAAAGTGATCATCAT ATACTTAAGACAAATCACGTGACTTGGCTGCTTGCTCAAATAATTCGAATCGAGCTGGTCATGAATGCTTTGAATTCAGATTCTAGAAAGGTGGAGACAA CGAGAAAGATTTTATCATTTCATAGAGAAGAGAGAAGTTCAGATCCTAATAACCCTCAAAGTATCTTGCTTGATTTTGTAAGCAGTTGTCAAAATTTACG TATTTGGTCATTGAACACATCAACCAGAGAACATCTGAACAATGAACAGCTTCAAAAAGGAAAGCAAATAGATGAATGGTGGCGACAAGCAATCAAAGGG GACCGGATGATGGATTATATGAATATGGATGACCGCTCAATAGGGATGTTTTGGGTTGTGTCTTACACAATGGCACAGCCTGCTTGTGAAACAGTAATAA ATTGGTTAACTTCGGCAGGAGTTGTTGACTTGATACCTGGAACAAATCTACAATCTGCTGAAAGATTAGTGGCTACACGAGAAGTGAGCCCACTTCCCAT GTCGTTGTTATCAGGATTTGCAATGAACTTATGTACGAAGCTGTCTTATCAGATGGAAGATTCACTGTTTTCTGGACAGGTTGTGCCCAGCATTGCAATG GTTGAGACTTATACTAGATTGTTGCTAATCTCTCCTCATTCACTTTTTCGTTCACATTTCCATCATTTAGTGCAACGGAGTCCTTCTTTGTTGAGCAAGC CCGGGGTAACTCTTTTGGTGCTTGAGATATTGAACTACCGATTACTTCCACTATACAGGTACCAGGGAAAAAGTAAAGCCTTGATGTATGATGTTACAAA GATTATTTCTGCTCTAAAAGGAAAACGAGGAGATCATCGAGCATTTAGATTAGCTGAAAATCTGTGCCTGAATCTTATTTTCTCATTGAGAGATTTCTTC TTGGTTAAAAGGGAGGGAAAGGGCCCAACGGAATTTACTGAAACTTTAAATCGAGCGACTGTTATAACACTTGCTATCCTTATTAAAACACGTGGTATTG CAGATGCTGATCACCTTCTGTATCTCCAAAATATGTTGGAACAAATAATGGGAACTAGCCAGCACACCTGGTCAGAAAAAACACTACGCTACTTCCCTTC TGTTCTGCGTGATGCATTGAGTGGGCGAATGGATAATAGAAGCCTTGCAATACAAGCTTGGCAGCAGGCAGAAACCACTGTTATACACCAGTGCACCCAG CTCCTTTCACCATCAGCTGATCCTAGTTATGTTATGACATATATCAGTCATAGTTTCCCTCAGCATCGGCAATATTTGTGTGCTGGTGCATTGATATTGA TGCAAGGCCATGCAGAAAACATTAACAGCGGAAACCTGGGGCGTGTGCTGCGGGAAATTTCCCCTGAAGAGGTGACATCTAACATTTATACTATGGTGGA TGTTCTACTTCATCATATTCAGGTGGAGCTTCAACAAGGACATTCCTTACAGGACCTTCTCTTAAAAGCTTGTGCTAGCCTTGTCTTTTTTGTTTGGACA AACGAGTTACTTCCTTTGGATATCTTGCTTCTAGCACTTATTGATCGTGATGATGATCCACATGCTTTGCGTATTGTGATTAGTTTACTTGATAGGCAAG AGCTTCAGCAAAGAGTAAAACTCTTTTGTATGACTCGTGGGCATCCTGAACATTGGCTATACTCCGGAATATTCAAGCGTGTTGAACTACAAAAAGCTCT TGGAAATCACCTCTCATGGAAGGATAGGTATCCAGTGTTCTTTGATGATATTGCAGCACGTCTTCTTCCGGTCATTCCTTTAATTGTTTATAGACTAATT GAAAATGACGCAATGGATCCAGCCGAAAGAATATTGGCCATGTATTCTCCATTGCTTGCTTATTACCCTCTAAGATTTACATTTGTTCGTGATATACTTG CTTACTTCTATGGTCATCTTCCTGGAAAGCTCATTGTTCGAATACTCAATGTACTTGATATCAGTAAGATTCCGTTTTCAGAGTCATTTCCACAGCAAAT AAGTTCGTCAAATCCTGTCATGTGCCCTCCTCTGGATTATTTTATGACTCTACTATTGGGAATAGTGAATAATGTTATTCCTCCATTACATAACAATTCA AAATCTGGACCTATGGGAGACACATCAAGCAATGCACAGAATACATCACAAAACAAACCTCCAACAGTGTCTCAGTCTGGGCCAGCAAATGCTTCTGACG GCCGAAAGGCATTCTACCAAATTCAGGATCCTGGCACATACACACAACTCGTTCTTGAAACTGCTGTCGTTGAAATACTTTCCCTTCCTGTATCTGCCTC TCAGATAGTACAATCACTTGTGCAAATTGTTGTTAATATACAACCAACATTGATCCAGTCCAGCAATGCTTTCCAAGGTTGTTCAAATGGCATAGGGCAA GGTTCAGTATTGCCAACATCGCCTTCAGGGGGGAGCACAGATTCCTTAGGTGCAAGCAGATCAACTCCTTCAGTTTCTGGAATAAATACGTCTAACTTTG CTTCACGGAGTGGTTATACATGCCAACAATTGTCTTGCTTGTTGATTCAAGCTTGTGGTCTCCTTCTGGCCCAGCTTCCTTCTGATTTTCACTTGCAACT TTACTTGGAAACAACTCGAATTATAAAAGAGAACTGGTGGCTTACAGATATGAAAAGGTCGCTTGCGGAAATAGACTCCGCTGTTGGCTATGCGTTGTTA GATCCAACTTGGGCTGCCCAGGACAATACCTCGACAGCTATCGGAAATGTGGTTGCGTTGCTTCATTCTTTCTTCAGTAACCTCCCTCAAGAATGGCTAG AAGGGACCCATGTTATCATCAAGCAACTTCGGCCCGTAACATCTGTTGCAATGTTGAGGATAGCATTCCGTATAATGGGTCCGCTCCTTCCAAAACTTGC CAATGCTCATGCACTTTTCAACAAGACCCTTGCATTACTATTAAGTATATTGGTGGATGCATTTGGAAAAAACTCCCAGACACCAATTGCTGTTAATGCA TCAGAAATAAGAGATGTTATCGATTTCCTCCATCATATAATCCATTATGAAGGCCAGGGAGGGTCTGTGCAAGCTAGCAGCAAACCTCGACCGGATGTTT TGGCTCTCATCGGAAGGGCATCAGAGAGTTTACGTCCGGATATTCAACATCTGCTTTCGCACCTAAAGCCTGATGTGAATTCTTCCATTTACGCGGCATC TCATCCGAAGTTAGTCCAGCAGAATACAACTCTCTGAGCAAATCAGCACATAGTTCTATTTCCATTTATAGAAGTATTGAAAGGTGGAAGTTGAGGATTA TTAGGTGTAAATGCATATAGGGTGAACATGTTTGAAGAGTAATTAGTCTGTGAAGTATACAGTGATAACATAATTTAAGAATGGTAAGAGTCCAGAGTTG TGTATAAATTGATCTATATACATATACATATACATATACCTATCCATTTCTCACAAACTGCATATCTAATGTTTGGAGCATCGTGTGTGTGAAAATGCTG ACAGAAACCTTTGTACTTGGTAATGTCTCTTTTGTTTATGTAACAAATATGTTTCCAATACTTGGTATTTGGTAATGTCCCCGAGAGTATTGAGAGCCTA CCGAGATATTAGATAACAAGGATTACAAGTTCAAATATGCATAAGATGTTTCTAATTGAAGGATTACAAGTTCAAATATGCATAAGATGTTTCTAATTGA AGGATTACAAGTTCAAATATGC BLAST |
Tissue | pods |
Gene name | LI_gene_183156; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_519532
Blastp | Mediator of RNA polymerase II transcription subunit 23 from Arabidopsis with 71.67% of identity |
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Blastx | Mediator of RNA polymerase II transcription subunit 23 from Arabidopsis with 71.78% of identity |
Eggnog | Mediator complex subunit 23(ENOG410ZH5R) |
Kegg | Link to kegg annotations (AT1G23230) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019412778.1) |
Pfam | Mediator complex subunit 23 (PF11573.7) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |