Id Trinity | TRINITY_DN51208_c0_g2_i10 |
---|---|
Name Transcript | Ll_transcript_519424 |
Sequence | CATAACTATAATCAGCTTAACGAGTTGGTACGCACAAAGGAAACTTGCGTGTGCGTGATCATCCCAATATTCCTTATTTCCTCTCTGTAACAGTTCACCC CAACCAATTCCCAGCTCAGTGTATTCCATCGTCTTCACCTTCTTCTTCTCCTCCTCCCATAACTGCTTCCATCATCAAAATTGACATAACTATAATCAGC GATGCATCAAGGAGATTACACCTCCGCTCCATATTATCAATTCCCTCATCTCCAAAACCCTAATTACCCTTCCGATCCTATCTCAAACCCTTACGCATCC GCACCCCCTTTCGCCTCCGATCACGCCCCTTACCCTCATAATTCCGATCCTGCCCCTATCCCCACCGTACCTTCTCCCACTGCCCCTCCCTCTTACCCTC CGCAATCTCATCACCCTAACAGTAATTTCACACCCTTCAATTCTTCATCCCTACCAACCCCATTCCCTTCCTTCGAATCTCATATCCCATACCAACCACC ACAATCTCAGCCACTGCCACATCAGCACCAACAACCGCAACCTTATTATCCACCCTACGATCAGCAGCATCAGACGGCTCCAAATTACACCCCTTCACCA CCGAACCCTCTTCCTCCTAACCTCAATAATCCACTGTACTCGTCCTCATACTCTGCACCCTACACCCACCCTGGATCCTATGAAACACCGTTTGAGAATG CGGTGAAGTTTGACCAAGGTGGCGGTTATTTGGACGATGGTTACGGGAACTTTAACCGGAGCCGGTCCGATTTCTATGGTACGCAGCCTCAGGATGAGGG CTATGGTGATGGAGTGTTTCCTTATGAAGGTGGGAAAGTGGAGCCGTATGGAGCGCGTGGTACGGCTCCAAAATCGTCGACTTGGGCTGCCTTTGATGAT TATGGAAGGTCTATTAGTTCTCCTTCAGCTGCTAAAGAGTCATCTGCAATGAGTAAGATTGTGAAAGCGGTGCCAAAGGTCGATGCAGCTGAAGATGTGA AATCTGGTGTGCAGAAGTTTCGAGTGAGGGTTTTGGCTGAGAGTGTTGGTCAGAGCAATATGGATGTTCTCTGTCAGATTGGTTTGGATGGAATTCGTAT GCTGGATCCAAATACCAGTCGGATGTTGAGAATATATCCTCTTGAGAACATAACAAGATGTGAAAAATTTGATTCATCTACCTTGGCATTCTGGTCAAAG AGCTCGGTGGACATGGAACCAAGACGAATCAGATTGCAATCCAATAGTTACACTACCAATACACTTTTGGATACAGTGACTGCTGCTACTATACAGTTCA AGGAAATGGGTGGGAGCAGAAAGCCTGCTGAACCTTTGAGAACAAATGAACAGGCTACAGAAAAAAGGAAAGGACTTGGTGATTGGATGAACTTGATTAA ACCTGCTAATGAAGAGAAGGACCATTGGGTAACATTAGATGCAATCTGAGTTTTATGCTATATTTCTTATCCTGTTTCACAATCCATGTAGCTGACCTCA TCCGGTGGGATTAAAGCTTGGTTGTTGTTTCACAATCCCCGGAAATAAGCTCCTTGTGTTTAAGCAGAAAAAATTGTTTCAGCTATATTTATTATTACTT GAGTGTTCCATTATATTGGTTGTTGGTTGTGATTGTTGGGACACAATTATATATTTGTTGCAATTAATTTTATCAAATTAATTTTTATAAATCTACGGTG CCTGACACTTCAGTTTTTGGGAAGTGTCCAAATGTCATATAATTTTAAAGAAAATGAATTATCAACTGTATTTATATACATCAGAGTCCTCAAACTTTAA CTATGACAATTTTTTCATGTTTTCTTGTAGTCAATTTGAGTTCTTATGAGGTTATATTTATGTATAGGTCCCAGATGAAGCAGTCTCAAAATGTACAGGA TGTGGCAGTGATTTTGGGGCTTTTAATCGCAGGGTTGACCTCCTGTTTCTTTTCTCGAGCTACTTTTTTGTTCCTTGTGCTTGGCTACTAATGTTTGATC ATCTATGCTGTTGACAGCATCACTGTAGGAACTGTGGTGATATTTTCTGTGACAAATGTACACACGGTAGAATTGCTCTGACTGCTGATGAGAATGCTCA GCCAGTACGAGTTTGTGACCGATGCATGGTATGTGTTATGTTTGTTGATTTTCTTTTTATTCCTTCTCCATCAACGAATGCATGGTGTGTTTGCTTTCGT AGCTGGAGGTTCATATGCTACTAAATGGAATTTCCATGCATGGGTTTATTGTTCATATGTGCTACCTCCGTCCCTCTCTTTCATATGCAATTTATTTGGA GTCAGTTCTTGAAACTGTAGTAAATTATTCCTTGGATCTTAATTTGGCAAATCTATTTTTGATTTACAAACACTAACACTTAGCAATTCATTTTTTTTCT TCCTGAAATTGAGTATACCTATATCCAAGTTTTATACAACCTTCTCAACACTAGAAACTATTTGGGTTGGGAGAAAAAATAAGGCCATGTCATGGTGTTA ACCTTGTAAAGGAGTATTCACAAAAATATTGTCTGTAAATGCTTAAATAAATTCAGGTAGATAATTTGCTGCCATGAAAACTTGTACGTATTTTGTTTGG TAAAGGCTAAAAGTTGAAGCGGGTGGTATGCAATTTGACCTTATATTTTTAAGCAGCATTTTATGTGCGTCGGAAGGACTGGTCTTATTGTTCTTTTGAT AATTAGGCAGAAGTGACCCAGAGGTTGAGTAATGCTAAGGAATCATCAAGTAAACCTGTGGTGCAGAGTCATGAGGATCTTGCCAGGAAACTTCAGGCAA GTAGTAGGGGCACACAGTAATGTTTTTTGTGTCTTGTTTCTATTGCTTATTGAACTTTTTAATTCTCTTATTTGGTTATATAGTAAAGCATAAATTTGTA AGCATGCATTAGATAGTGATTTGTTTTGTTGGTGATTTTTTGTAGGAGGAGCTGCAGAGGAATCGAAAGACATCAGGTATTGTAATCTGACTTCAACTGT GGGAAGCCTGGGTTGTAAAAATTGCTGTAGTTTGATTCATAAATTGTCAAGGAGGTAGCAGGTTTTGAATGAGAATCTGTTGGGTGGCTAGTGTGGTTGG AATAGCTGAATTTTTAATGAAGATATGGAAATTAATGTCTGTAGCTAATTTAAGTGAGATTTGATTCACAGGTTTCAAATCGGATGGAAACGGAAGACGA ATGAAGGAAGTTGC BLAST |
Tissue | pods |
Gene name | LI_gene_183204; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_519424
Blastp | Protein FREE1 from Arabidopsis with 49.48% of identity |
---|---|
Blastx | Protein FREE1 from Arabidopsis with 62.22% of identity |
Eggnog | FYVE zinc finger(ENOG410Y0W8) |
Kegg | Link to kegg annotations (AT1G20110) |
CantataDB | Link to cantataDB annotations (CNT0000362) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019449469.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |