Ll_transcript_517209

• Id Trinity: TRINITY_DN51211_c1_g1_i2
• Name Transcript: Ll_transcript_517209
• Sequence: GGAAACGTGAGAGGAGTTGAGAGAGAAGAAGCAAGAAGGAAAAAGGTGTGACCTTTACAGACATGCTCATACACCATCTATCCTTTTCACTTTTTTAACC CCAACAACAATTAGCCACGATTACTTTATACATTACCCACCATTTTTTAGCCACAGTTTCTCACATTTTTTAATATATTTTTATTATCTATCCTCCATTG ATTTTCATTTTTCAAGTTCAAACCCATTTATTATCATAGGATTTGTGGTTTAGCCACATCTTCAAATTCCTTTTCTCCTAATAATTGAGATTGGGTTGTC ACACACTTATTGCAAATAGGAATACCATTACATTACAGTTACACTCTTGCTATTTTGAACAAGTAGCGTAGGTTCATGACATTTTTGACATCTGGGTCTT ATCCAAGTTCAAAATTTTCGTAATGGGTTGTATCTATTCTAAGGTTTGCATAGGTGATACTTGTAGAGATTCCAGCATCAATGGTGATGCTATTACTAGA CATGCTGCACTTTCTGAATCATCTTCTGATGTTCAACAAGGTGAAATGAGAGACCAATTGAACCGGTTGAGCTTAACCAGAGACCCTGAAGCTGGAATTA GAAGACTAGCTAGGGTTTCAGCACAGTTTCTTCCACCAGATGGGTCAAGAACAGTTAAGGTAGCTTCAAAGGGGTATGAATTAAGGTATTCGTATTTGTC GCAGCGAGGTTATTACCCTGATGATTTGGATAAGGCTAATCAGGACAGTTTCTGCGTCCACACGCCATTTGGAACGAGTCCTGATGACCATTTCTTTGGA GTTTTTGATGGTCATGGTGAATTTGGAGCGCAGTGTTCGCAGTTTGTGAAGCGTAAGCTGTGTGAGAATTTGCTCAGGAATAGTAAGTTTCATGTGGATG CTGTAGAGGCTTGTCACGCGGCATTCTTGGCTACGAATTCACAGTTGCATGCTGATATTTTGGATGATAGCATGAGTGGCACGACTGCGATCACGGTGTT GGTTAGGGGAAGGACAATATATGTGGCAAATTCAGGTGATTCGAGGGCGGTGATTGGAGAGAGGAGAGGGAAGGATTTAGTGGCGGTTGATCTGTCGAAT GATCAGACGCCTTTTAGGCCTGATGAGCTTGAGAGGGTGAAGCTTTGTGGAGCTCGGGTTCTTACTTTGGATCAGATTGAAGGGCTTAAGAACCCTGATG TTCAGTGTTGGGGCACCGAAGAAGCTGATGATGGTGACCCTCCTAGGCTGTGGGTGCCCAATGGTATGTACCCTGGTACTGCTTTTACAAGGAGCCTAGG TGATTCTATTGCCGAGTCTATTGGTGTTGTTGCTAATCCTGAGATTCTTGTCTTTGAGCTCACAAGAGATCACCCTTTCTTTGTGCTCGCAAGTGATGGG GTGTTTGAGTTTCTGTCTAGCCAAACCGTGGTCGAAATGGTTGCCAAATTCAACGATCCCCGTGATGCTTGTGCTGCAATAGTGGCTGAATCTTACCGAC TCTGGCTACAGTGTGAAACCCGTACAGATGATATTACAGTCATTATTGTGCATATCAATGGGCTAACTGATCCTGCTGTTGGTCAGTCAGCAAGTTATGA TGATGTTCTACCAACCCGAGTGCCTCACGCTGTTGAGGTGACAGGTTCAGAATCTCCATCCAACTTTGGCTTGAACTCTGGGAATCATCGTGTACGGCAT GACTTGTCAAGGGCACGCCTCCGAGCAATTGAAAATTCCCTAGAGAACGGGCAAGCTTGGGTTCCTCCATCTTCAGCCCACAGGAAGACATGGGAAGAAG AAGCACACATAGAGCAGGCGTTGCAGGATCATTTTCTCTTCAGAAAACTGACTGATTCTCAATGTCATGTTTTATTGGATTGCATGCAAAGAGTTGAGGT CGAAGCTGGGGATATTATAGTCCAGCAGGGTGGTGAAGGTGACTGTTTTTATGTTGTTGGTAGTGGAGAATTTGAGGTCTTGGCAACTCAGGAAGAAAAG GACGGGGAAGTACCTAGGGTTTTGCAGCGCTATACAGCTGAAAAACTGTCATGCTTTGGAGAACTTGCTCTAATGTACAATAAACCACTCCAGGCCTCTG TACGTGCTGTAACAAATGGAACTCTCTGGGCTTTAAAGCGAGAAGATTTTCGAGGGATTTTAATTTCGGAGTTCTCCAATTTATCATCCTTGAAGTTGCT TCGGTCCGTTGATCTCCTCTCTAGGTTGACAATTTTGCAACTCAGTCAGATTTCAGACTCCCTTTCTGAAGTTTCCTTCTCAAGTGGGCAGACAATAATT GATAAAGATGAAGCCCTTGCATTGTACATTATCCAAAAGGGACAAGTGAAAATCACTTTTAATTCTGATATATTGACTAGTCCAATTGCCTGCAGCCTCA AGCCTGACATCGAAAATGAGGATGATAATGCACATAGCAGAAGAGAACTATCAATAGAGAAGCCCGAGGGAAGCTATTTTGGTGAATGGACCCTTCTTGG TGAACATATTGGTTCCTTAAGTGCTGTAGCTGTTAGTGATGTTGTATGTGCTGTACTAACAAAGGAGAAATTTGAATCTGTTGTTGGCTCCTTGCAAAAG CTTTCACATGAAGATCTCAAGTATGTTTTAATACATTCAATTGTCAGAGAACAGCTTTTTGGTTTCTGTTTATAACTAAACGTTTACGCGCTGCACTTAA AAACAAAGCTTCGTATCATTGGCACCATTTATTTGACCATAGGTTGCGGGATAATTCGAAGCAGTTGACTGGAAACTTTGACTTTCCATCCCTTGATAAA GTCCAGCTCTCAGATTTGGAGTGGAGAAAGACACTATATTCCACTGACTGCTCTGAGATTGGGCTTGCAAATTTAAGAGACTCAGGTCGATAAATCTTTC TCCACTTCTTTTTATATTTTTTCTATCGATCTCCAAATTTGACTCATTCAACTCCTTTTGTGAAGTAAATTGACGTAAACTTAATCCTTGGAGGATTATG TTCCTTCTTAATTGAGTTAAATTTGAAGAACTATATATTCAGGGAATGTGAAAAATCTTTGGAGTACTAAATGGATGTAAACCTCATCTTTATAGTGGCC AAAATATCAATATATGCCCAACATTTATTCGACTTATTTTTTGGCACTTTGGCTAGCATTTGCTGCATCAACTAATAGCATCAATACAGTCAATAGTGAT ATTTGATAAAACATTAGATTTTGCTTTTGCTACTGCAATTTGCTGCCTAAATACAGATTGCTTGCAGAAAATTTTCTGACGTTGAAGAGATTTTCTAAGC CAAAGGTGAAAAGGCTAGGAAAAGAAGCACAAGTCTTGAAAGAGAAAAACTTGATTAAGGGTATGAGCTCTTCAGCTTGTATACCGCAGGTTTTCTGCAC TTCTGCTGACCGCATATATGCTGGAATACTGCTAAATACATGCCTCGCTTGCCCTTTGTCTTCCATACTTTCAAGTCCTTTGGGTGAATCAGCGGCACGG TTCTGTGCTGCTTCTGTTGTTACTGCTTTAGAAGACTTGCACAAGAATGGTGTTCTCTATAGAGGTGTATCACCTGATGTTTTGATGTTAAACCAAACAG GACAGATACAGCTGGTGGACTTCAGATTTGGTAAGAGGCTATCGGATGAGAGAACATTCACAATTTGTGGGATGGCAGATTCGCTAGCTCCGGAGATTGT TTTGGGTAAAGGTCATGGCTTCCCTGCTGACTGGTGGGCGCTGGGAGTTTTAATATATTTCATGTTACAGGGTGAGATGCCATTTGGATCATGGAGAGAA AATGAACTCGATACAGTTGCCAAAATTGCAAAACGGAAGCTATATCTTCCGGAGACTTTCAGCCCTGAAGCTGTTGATCTCATCTCTAAGTTACTTGACA CGGAAGAAAACACTAGACTCGGTAGCCAAGGTCCTGATTCTGTCAAAAGTCATCCATGGTTTAATGGTATTGACTGGGAAGGGATTAGACACCATACATG CCCTGTTCCTGAGGAAATTATTTCTCGGCTAACGCCATACTTGGAATTTCATTCCGAGGATTGTACTGGTTCTCTAGGTTCTCCACCACAGGAAGTAGAA GAACTTAATGTACCTGAATGGCTTGAAGACTGGTAAAAGAATGAGCATTTGTTAACTTTTTAAAGTTTAGCTCTGCACCAATATTTACCTTTGCCAGTAA CCCTTCATTCAGTCCTCGAAAGATTATGGCATCGTCAAGTAAGTCCTCGAAAGATTTTTATCATCGATTAAATCCTTAAAAGATTCGAAGTGTCACAATA TAGTCCTTCTATATAGCTGACACTTTGAATCTTTGAAGAATATATAGATGACATAATCTTTTGAGGACAATTGCAGTCTAAGAATGCAAAGAGATCAAGG ATCTAGAATATTCCACCTGGTTAAGTAGTTCAGTTTTGTGACATAGTTGCATTGGAAAACAAATATATTCTAAGTGCTTTCCATGCTGCCTTTATTTATT GAAGTAGCTGAACTTGTAGGTAGGTTTGATATGTTCTTTTAATCTTTACCTCTTTCATTTTCTTATTTTTTGTGGGAATTACTCTCATATGTAAATATTA TATATATGTACATGAGTGAGTTTATTCACATTTATGATTGAAATGTTTAGAATAATATTTTTTATGGACAAATGTTTAC
• Tissue: pods
• Gene name: LI_gene_183222;
• Additional information: details;

Expression of Ll_transcript_517209

FPKM

• PAB: 0.2
• PNAB: 0.1
• PS1: 0.6
• PS2: 0.3
• PS3: 0.2
• PW1: 0.4
• PW2: 0.3
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_517209

• Blastp: Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein from Arabidopsis with 72.78% of identity
• Blastx: Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein from Arabidopsis with 73.13% of identity
• Eggnog: transcriptional regulator, crp fnr family(COG0664)
• Kegg: Link to kegg annotations (AT2G20050)
• CantataDB: Link to cantataDB annotations (CNT0001152)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019436612.1)
• Pfam: Protein phosphatase 2C (PF00481.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;